RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 PPP1R11O60927 126 aaPredicted RBP4.52□□□□□ -1.69
CHD2-203ENST00000625243 ZNF623O75123 536 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 CYP1A1P04798 512 aaPredicted RBP4.52□□□□□ -1.69
CHD2-203ENST00000625243 MCM4P33991 863 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 CRKP46108 304 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 EPHB4P54760 987 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 PPP2CBP62714 309 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 PPP2CAP67775 309 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 XPCQ01831 940 aaPredicted RBP4.52□□□□□ -1.69
CHD2-203ENST00000625243 POU4F1Q01851 419 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 SEZ6Q53EL9 994 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 TDRD10Q5VZ19 366 aaKnown RBP4.52□□□□□ -1.69
CHD2-203ENST00000625243 DCAF15Q66K64 600 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 WWC2Q6AWC2 1192 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 ETV3LQ6ZN32 361 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 MTA3Q9BTC8 594 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 GULP1Q9UBP9 304 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 SIT1Q9Y3P8 196 aa4.52□□□□□ -1.69
CHD2-203ENST00000625243 MEIS3P2A8K0S8 358 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 PATE3B3GLJ2 98 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 EIF4A3P38919 411 aaKnown RBP4.51□□□□□ -1.69
CHD2-203ENST00000625243 PMS1P54277 932 aaKnown RBP4.51□□□□□ -1.69
CHD2-203ENST00000625243 ITGA1P56199 1179 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 PURAQ00577 322 aaKnown RBP4.51□□□□□ -1.69
CHD2-203ENST00000625243 ANKRD39Q53RE8 183 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 PRAMEF18Q5VWM3 479 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 EEF1DP3Q658K8 133 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 ARHGEF18Q6ZSZ5 1173 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 TMC4Q7Z404 712 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 REXO1Q8N1G1 1221 aaKnown RBP4.51□□□□□ -1.69
CHD2-203ENST00000625243 ZDHHC15Q96MV8 337 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 PTPN18Q99952 460 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 NOL6Q9H6R4 1146 aaKnown RBP4.51□□□□□ -1.69
CHD2-203ENST00000625243 KCNQ5Q9NR82 932 aa4.51□□□□□ -1.69
CHD2-203ENST00000625243 NTRK1P04629 796 aa4.5□□□□□ -1.69
CHD2-203ENST00000625243 FOXE3Q13461 319 aa4.5□□□□□ -1.69
CHD2-203ENST00000625243 AXDND1Q5T1B0 1012 aaPredicted RBP4.5□□□□□ -1.69
CHD2-203ENST00000625243 RCSD1Q6JBY9 416 aa4.5□□□□□ -1.69
CHD2-203ENST00000625243 ZC3H18Q86VM9 953 aaKnown RBP4.5□□□□□ -1.69
CHD2-203ENST00000625243 ZNF296Q8WUU4 475 aaPredicted RBP4.5□□□□□ -1.69
CHD2-203ENST00000625243 CEP89Q96ST8 783 aa4.5□□□□□ -1.69
CHD2-203ENST00000625243 COPRSQ9NQ92 184 aa4.5□□□□□ -1.69
CHD2-203ENST00000625243 ANKRD33BA6NCL7 494 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 TP53P04637 393 aaPredicted RBP4.49□□□□□ -1.69
CHD2-203ENST00000625243 CD247P20963 164 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 ZNF165P49910 485 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 ABHD18Q0P651 414 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 SLFN13Q68D06 897 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 CPNE8Q86YQ8 564 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 KBTBD2Q8IY47 623 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 SMARCC1Q92922 1105 aaPredicted RBP4.49□□□□□ -1.69
CHD2-203ENST00000625243 MBD6Q96DN6 1003 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 TMEM168Q9H0V1 697 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 IKZF4Q9H2S9 585 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 FAM86C1Q9NVL1 165 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 ZNF451Q9Y4E5 1061 aa4.49□□□□□ -1.69
CHD2-203ENST00000625243 FUCA1P04066 466 aa4.48□□□□□ -1.69
CHD2-203ENST00000625243 ITGA4P13612 1032 aa4.48□□□□□ -1.69
CHD2-203ENST00000625243 ZNF28P17035 718 aa4.48□□□□□ -1.69
CHD2-203ENST00000625243 NANOS3P60323 173 aaKnown RBP4.48□□□□□ -1.69
CHD2-203ENST00000625243 PPP2R5DQ14738 602 aa4.48□□□□□ -1.69
CHD2-203ENST00000625243 INTS3Q68E01 1043 aaKnown RBP4.48□□□□□ -1.69
CHD2-203ENST00000625243 PPFIBP1Q86W92 1011 aa4.48□□□□□ -1.69
CHD2-203ENST00000625243 MIB1Q86YT6 1006 aa4.48□□□□□ -1.69
CHD2-203ENST00000625243 Q8TCH9 128 aa4.48□□□□□ -1.69
CHD2-203ENST00000625243 L2HGDHQ9H9P8 463 aa4.48□□□□□ -1.69
CHD2-203ENST00000625243 UBP1Q9NZI7 540 aa4.48□□□□□ -1.69
CHD2-203ENST00000625243 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHD2-203ENST00000625243 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
CHD2-203ENST00000625243 ZBTB7CA1YPR0 619 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 AURKAO14965 403 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 SORBS3O60504 671 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 B4GALT4O60513 344 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 ZNF202O95125 648 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 IL13P35225 146 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 DPTQ07507 201 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 APOBRQ0VD83 1088 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 HNRNPA0Q13151 305 aaKnown RBP4.47□□□□□ -1.69
CHD2-203ENST00000625243 HS1BP3Q53T59 392 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 MIIPQ5JXC2 388 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 IGFL4Q6B9Z1 124 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 PKN3Q6P5Z2 889 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 ERMP1Q7Z2K6 904 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 DCP2Q8IU60 420 aaKnown RBP4.47□□□□□ -1.69
CHD2-203ENST00000625243 YTHDC1Q96MU7 727 aaKnown RBP4.47□□□□□ -1.69
CHD2-203ENST00000625243 MCMBPQ9BTE3 642 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 TRAIPQ9BWF2 469 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 AP5M1Q9H0R1 490 aa4.47□□□□□ -1.69
CHD2-203ENST00000625243 DIS3Q9Y2L1 958 aaKnown RBP4.47□□□□□ -1.69
CHD2-203ENST00000625243 A0A087WZG4 1122 aa4.46□□□□□ -1.7
CHD2-203ENST00000625243 PATL2C9JE40 543 aaKnown RBP4.46□□□□□ -1.7
CHD2-203ENST00000625243 STXBP3O00186 592 aa4.46□□□□□ -1.7
CHD2-203ENST00000625243 NPHS1O60500 1241 aa4.46□□□□□ -1.7
CHD2-203ENST00000625243 STAT5AP42229 794 aa4.46□□□□□ -1.7
CHD2-203ENST00000625243 SEPHS1P49903 392 aa4.46□□□□□ -1.7
CHD2-203ENST00000625243 TCEAL1Q15170 157 aa4.46□□□□□ -1.7
CHD2-203ENST00000625243 NRN1LQ496H8 165 aa4.46□□□□□ -1.7
CHD2-203ENST00000625243 RNF207Q6ZRF8 634 aa4.46□□□□□ -1.7
CHD2-203ENST00000625243 TRIM8Q9BZR9 551 aa4.46□□□□□ -1.7
CHD2-203ENST00000625243 CSRNP2Q9H175 543 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms