RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 TIGD5Q53EQ6 642 aa8.66□□□□□ -1.02
LINC00963-218ENST00000624138 TCEAL5Q5H9L2 206 aa8.66□□□□□ -1.02
LINC00963-218ENST00000624138 AACSQ86V21 672 aa8.66□□□□□ -1.02
LINC00963-218ENST00000624138 RNF135Q8IUD6 432 aa8.66□□□□□ -1.02
LINC00963-218ENST00000624138 CCDC155Q8N6L0 562 aa8.66□□□□□ -1.02
LINC00963-218ENST00000624138 BANK1Q8NDB2 785 aa8.66□□□□□ -1.02
LINC00963-218ENST00000624138 OR6J1Q8NGC5 347 aa8.66□□□□□ -1.02
LINC00963-218ENST00000624138 PPP1R13LQ8WUF5 828 aa8.66□□□□□ -1.02
LINC00963-218ENST00000624138 SAMD11Q96NU1 681 aa8.66□□□□□ -1.02
LINC00963-218ENST00000624138 POP1Q99575 1024 aaKnown RBP8.66□□□□□ -1.02
LINC00963-218ENST00000624138 NKRFO15226 690 aaKnown RBP eCLIP8.65□□□□□ -1.023e-7■■■□□ 16.5
LINC00963-218ENST00000624138 NCK2O43639 380 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 ALAS1P13196 640 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 MKRN4PQ13434 485 aaPredicted RBP8.65□□□□□ -1.02
LINC00963-218ENST00000624138 IKBKEQ14164 716 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 CTC1Q2NKJ3 1217 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 EPC2Q52LR7 807 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 BRDTQ58F21 947 aaPredicted RBP8.65□□□□□ -1.02
LINC00963-218ENST00000624138 MUM1L1Q5H9M0 696 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 TRIM67Q6ZTA4 783 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 LRRC8DQ7L1W4 858 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 FAM160B2Q86V87 743 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 SESTD1Q86VW0 696 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 ERC1Q8IUD2 1116 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 TMEM57Q8N5G2 664 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 CHURC1Q8WUH1 139 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 STAG1Q8WVM7 1258 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 DHX38Q92620 1227 aaKnown RBP8.65□□□□□ -1.02
LINC00963-218ENST00000624138 PBXIP1Q96AQ6 731 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 DDRGK1Q96HY6 314 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 PURBQ96QR8 312 aaKnown RBP8.65□□□□□ -1.02
LINC00963-218ENST00000624138 IRF2BPLQ9H1B7 796 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 NSUN3Q9H649 340 aaKnown RBP8.65□□□□□ -1.02
LINC00963-218ENST00000624138 MKNK2Q9HBH9 465 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 MTMR4Q9NYA4 1195 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 ARPP21Q9UBL0 812 aaPredicted RBP8.65□□□□□ -1.02
LINC00963-218ENST00000624138 ADD3Q9UEY8 706 aaKnown RBP8.65□□□□□ -1.02
LINC00963-218ENST00000624138 NOD1Q9Y239 953 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 SLC4A4Q9Y6R1 1079 aa8.65□□□□□ -1.02
LINC00963-218ENST00000624138 DMDP11532 3685 aa8.65□□□□□ -1.03
LINC00963-218ENST00000624138 TTC3P53804 2025 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 RAD50Q92878 1312 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 TMEM221A6NGB7 291 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 TMEM232C9JQI7 657 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 PROB1E7EW31 1015 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 M0R296 226 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 MBTPS2O43462 519 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 TTLL1O95922 423 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 CKBP12277 381 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 ALDH5A1P51649 535 aaPredicted RBP8.64□□□□□ -1.03
LINC00963-218ENST00000624138 STAT2P52630 851 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 GPM6BQ13491 265 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 UBE3CQ15386 1083 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 SLFN13Q68D06 897 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 GDF6Q6KF10 455 aaPredicted RBP8.64□□□□□ -1.03
LINC00963-218ENST00000624138 ERMP1Q7Z2K6 904 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 RPAINQ86UA6 219 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 LRRC47Q8N1G4 583 aaKnown RBP8.64□□□□□ -1.03
LINC00963-218ENST00000624138 FBXL6Q8N531 539 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 CLUAP1Q96AJ1 413 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 CEP95Q96GE4 821 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 CRBNQ96SW2 442 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 DNAJC2Q99543 621 aaKnown RBP8.64□□□□□ -1.03
LINC00963-218ENST00000624138 C1orf115Q9H7X2 142 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 CLDND1Q9NY35 253 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 PLXNA4Q9HCM2 1894 aa8.64□□□□□ -1.03
LINC00963-218ENST00000624138 CHGBP05060 677 aa8.63□□□□□ -1.03
LINC00963-218ENST00000624138 DLX2Q07687 328 aaPredicted RBP8.63□□□□□ -1.03
LINC00963-218ENST00000624138 FAM117BQ6P1L5 589 aa8.63□□□□□ -1.03
LINC00963-218ENST00000624138 GIMAP6Q6P9H5 292 aa8.63□□□□□ -1.03
LINC00963-218ENST00000624138 TRAF7Q6Q0C0 670 aa8.63□□□□□ -1.03
LINC00963-218ENST00000624138 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.63□□□□□ -1.03
LINC00963-218ENST00000624138 RHPN1Q8TCX5 695 aa8.63□□□□□ -1.03
LINC00963-218ENST00000624138 GMCL1Q96IK5 515 aa8.63□□□□□ -1.03
LINC00963-218ENST00000624138 PUS7LQ9H0K6 701 aaKnown RBP8.63□□□□□ -1.03
LINC00963-218ENST00000624138 IL1RAPL2Q9NP60 686 aa8.63□□□□□ -1.03
LINC00963-218ENST00000624138 PAG1Q9NWQ8 432 aa8.63□□□□□ -1.03
LINC00963-218ENST00000624138 EXOC6BQ9Y2D4 811 aa8.63□□□□□ -1.03
LINC00963-218ENST00000624138 PLIN4Q96Q06 1357 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 DOCK5Q9H7D0 1870 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 CACNA1BQ00975 2339 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 GSG1L2A8MUP6 293 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 STXBP3O00186 592 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 ZXDAP98168 799 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 SMAD4Q13485 552 aaKnown RBP8.62□□□□□ -1.03
LINC00963-218ENST00000624138 BAATQ14032 418 aaPredicted RBP8.62□□□□□ -1.03
LINC00963-218ENST00000624138 MBTPS1Q14703 1052 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 PPP2R5BQ15173 497 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 TRIM71Q2Q1W2 868 aaKnown RBP8.62□□□□□ -1.03
LINC00963-218ENST00000624138 NSMFQ6X4W1 530 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 EP400NLQ6ZTU2 488 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 SUGP1Q8IWZ8 645 aaKnown RBP8.62□□□□□ -1.03
LINC00963-218ENST00000624138 TMEM192Q8IY95 271 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 ZNF444Q8N0Y2 327 aaPredicted RBP8.62□□□□□ -1.03
LINC00963-218ENST00000624138 NEDD1Q8NHV4 660 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 SCFD2Q8WU76 684 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 KAT2BQ92831 832 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 FRAT1Q92837 279 aaPredicted RBP8.62□□□□□ -1.03
LINC00963-218ENST00000624138 COPS5Q92905 334 aa8.62□□□□□ -1.03
LINC00963-218ENST00000624138 STRBPQ96SI9 672 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms