RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 SLF1Q9BQI6 1058 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 GTPBP4Q9BZE4 634 aaKnown RBP17.07■□□□□ 0.32
ATRX-211ENST00000623321 RPAP3Q9H6T3 665 aaPredicted RBP17.07■□□□□ 0.32
ATRX-211ENST00000623321 PRDM10Q9NQV6 1147 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 KCNH3Q9ULD8 1083 aa17.07■□□□□ 0.32
ATRX-211ENST00000623321 PAPPA2Q9BXP8 1791 aa17.06■□□□□ 0.32
ATRX-211ENST00000623321 ATP1A3P13637 1013 aa17.06■□□□□ 0.32
ATRX-211ENST00000623321 CLK2P49760 499 aaKnown RBP17.06■□□□□ 0.32
ATRX-211ENST00000623321 HMGCS2P54868 508 aa17.06■□□□□ 0.32
ATRX-211ENST00000623321 ZNF174Q15697 407 aa17.06■□□□□ 0.32
ATRX-211ENST00000623321 USH1GQ495M9 461 aa17.06■□□□□ 0.32
ATRX-211ENST00000623321 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
ATRX-211ENST00000623321 CLIC6Q96NY7 704 aa17.06■□□□□ 0.32
ATRX-211ENST00000623321 TANGO6Q9C0B7 1094 aa17.06■□□□□ 0.32
ATRX-211ENST00000623321 WNT7AO00755 349 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 INF2Q27J81 1249 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 SH3D19Q5HYK7 790 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 MAP1SQ66K74 1059 aaPredicted RBP17.05■□□□□ 0.32
ATRX-211ENST00000623321 ARMC9Q7Z3E5 817 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 TMEM260Q9NX78 707 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 TMOD4Q9NZQ9 345 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 DDX41Q9UJV9 622 aaKnown RBP17.05■□□□□ 0.32
ATRX-211ENST00000623321 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 FLOT1O75955 427 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 LONRF3Q496Y0 759 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 CCDC174Q6PII3 467 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
ATRX-211ENST00000623321 MOB2Q70IA6 237 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 VSTM4Q8IW00 320 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 CNNM3Q8NE01 707 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
ATRX-211ENST00000623321 PPP1R9AQ9ULJ8 1098 aa17.05■□□□□ 0.32
ATRX-211ENST00000623321 PTPREP23469 700 aa17.04■□□□□ 0.32
ATRX-211ENST00000623321 UBASH3AP57075 661 aa17.04■□□□□ 0.32
ATRX-211ENST00000623321 MDM2Q00987 491 aaPredicted RBP17.04■□□□□ 0.32
ATRX-211ENST00000623321 PPATQ06203 517 aa17.04■□□□□ 0.32
ATRX-211ENST00000623321 MCTP2Q6DN12 878 aa17.04■□□□□ 0.32
ATRX-211ENST00000623321 ISM2Q6H9L7 571 aa17.04■□□□□ 0.32
ATRX-211ENST00000623321 ERO1BQ86YB8 467 aa17.04■□□□□ 0.32
ATRX-211ENST00000623321 TEX2Q8IWB9 1127 aa17.04■□□□□ 0.32
ATRX-211ENST00000623321 TMX1Q9H3N1 280 aa17.04■□□□□ 0.32
ATRX-211ENST00000623321 ELP3Q9H9T3 547 aa17.04■□□□□ 0.32
ATRX-211ENST00000623321 SRPRBQ9Y5M8 271 aaKnown RBP17.04■□□□□ 0.32
ATRX-211ENST00000623321 OTOFQ9HC10 1997 aa17.04■□□□□ 0.32
ATRX-211ENST00000623321 SERPINC1P01008 464 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 FDX1P10109 184 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 MCM7P33993 719 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 UBE2SQ16763 222 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 NEK8Q86SG6 692 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 FCHSD1Q86WN1 690 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 LDHDQ86WU2 507 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 TBCKQ8TEA7 893 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 FBXO2Q9UK22 296 aaPredicted RBP17.03■□□□□ 0.32
ATRX-211ENST00000623321 SPDYE5A6NIY4 337 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 ATP2C1P98194 919 aaPredicted RBP17.03■□□□□ 0.32
ATRX-211ENST00000623321 PTGDRQ13258 359 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 NT5DC1Q5TFE4 455 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 ZNF579Q8NAF0 562 aaKnown RBP17.03■□□□□ 0.32
ATRX-211ENST00000623321 CLMNQ96JQ2 1002 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 SLC38A10Q9HBR0 1119 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 MRPL11Q9Y3B7 192 aaKnown RBP17.03■□□□□ 0.32
ATRX-211ENST00000623321 PCDHA5Q9Y5H7 936 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 PHLPP2Q6ZVD8 1323 aa17.03■□□□□ 0.32
ATRX-211ENST00000623321 USP17L15C9J2P7 530 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 USP17L13C9JLJ4 530 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 USP17L11C9JVI0 530 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 USP17L18D6R9N7 530 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 USP17L22D6RA61 530 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 USP17L17D6RBQ6 530 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 USP17L19D6RCP7 530 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 USP17L20D6RJB6 530 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 TRAF5O00463 557 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 MEIS2O14770 477 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 ICAM1P05362 532 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 USP17L24Q0WX57 530 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 AP3B2Q13367 1082 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 LDLRAD1Q5T700 205 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 USP17L6PQ6QN14 398 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 FERMT2Q96AC1 680 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 PNMA2Q9UL42 364 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 ABCB11O95342 1321 aa17.02■□□□□ 0.32
ATRX-211ENST00000623321 UNCXA6NJT0 531 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 CXCL11O14625 94 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 OPLAHO14841 1288 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 ZBED4O75132 1171 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 COG2Q14746 738 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 LETM2Q2VYF4 491 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 KMT5BQ4FZB7 885 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 SYT10Q6XYQ8 523 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 CATSPERGQ6ZRH7 1159 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 ZNF536O15090 1300 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 PIK3CDO00329 1044 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 FOSP01100 380 aaPredicted RBP17.01■□□□□ 0.31
ATRX-211ENST00000623321 BMP6P22004 513 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 ORC2Q13416 577 aaPredicted RBP17.01■□□□□ 0.31
ATRX-211ENST00000623321 POSTNQ15063 836 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 ELF2Q15723 593 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 C4orf32Q8N8J7 132 aa17.01■□□□□ 0.31
ATRX-211ENST00000623321 TRIML1Q8N9V2 468 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms