RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CBX4O00257 560 aa6.79□□□□□ -1.32
CPNE3-213ENST00000622183 S100BP04271 92 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-213ENST00000622183 CKMP06732 381 aa6.79□□□□□ -1.32
CPNE3-213ENST00000622183 EVA1CP58658 441 aa6.79□□□□□ -1.32
CPNE3-213ENST00000622183 LAPTM5Q13571 262 aa6.79□□□□□ -1.32
CPNE3-213ENST00000622183 AOC3Q16853 763 aa6.79□□□□□ -1.32
CPNE3-213ENST00000622183 CPNE8Q86YQ8 564 aa6.79□□□□□ -1.32
CPNE3-213ENST00000622183 IGSF22Q8N9C0 903 aa6.79□□□□□ -1.32
CPNE3-213ENST00000622183 TMEM52Q8NDY8 209 aa6.79□□□□□ -1.32
CPNE3-213ENST00000622183 MISP3Q96FF7 219 aa6.79□□□□□ -1.32
CPNE3-213ENST00000622183 SPOCK3Q9BQ16 436 aa6.79□□□□□ -1.32
CPNE3-213ENST00000622183 C7orf72A4D263 438 aa6.78□□□□□ -1.32
CPNE3-213ENST00000622183 BRINP1O60477 761 aa6.78□□□□□ -1.32
CPNE3-213ENST00000622183 GLRX3O76003 335 aaKnown RBP6.78□□□□□ -1.32
CPNE3-213ENST00000622183 SOD2P04179 222 aa6.78□□□□□ -1.32
CPNE3-213ENST00000622183 HOXA10P31260 410 aaPredicted RBP6.78□□□□□ -1.32
CPNE3-213ENST00000622183 CEBPAP49715 358 aaPredicted RBP6.78□□□□□ -1.32
CPNE3-213ENST00000622183 GTF2A2P52657 109 aa6.78□□□□□ -1.32
CPNE3-213ENST00000622183 EXOSC10Q01780 885 aaKnown RBP6.78□□□□□ -1.32
CPNE3-213ENST00000622183 MSMPQ1L6U9 139 aa6.78□□□□□ -1.32
CPNE3-213ENST00000622183 HLA-DQA1Q5Y7H0 255 aa6.78□□□□□ -1.32
CPNE3-213ENST00000622183 OR2W6PQ8NHA6 318 aa6.78□□□□□ -1.32
CPNE3-213ENST00000622183 CEP89Q96ST8 783 aa6.78□□□□□ -1.32
CPNE3-213ENST00000622183 TIMM13Q9Y5L4 95 aaPredicted RBP6.78□□□□□ -1.32
CPNE3-213ENST00000622183 FAM47E-STBD1D6RA91 191 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 ZEB2O60315 1214 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 NPHS1O60500 1241 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 F2P00734 622 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 TGFB1P01137 390 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 SRGAP2CP0DJJ0 459 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 BPIP17213 487 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 GRK2P25098 689 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 GRK3P35626 688 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 SCNN1BP51168 640 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 RPL11P62913 178 aaKnown RBP6.77□□□□□ -1.33
CPNE3-213ENST00000622183 LSAMPQ13449 338 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 STAT4Q14765 748 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 BRDTQ58F21 947 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-213ENST00000622183 FAM47CQ5HY64 1035 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 NECAB2Q7Z6G3 386 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 MAP6Q96JE9 813 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 TTC1Q99614 292 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 G6PC3Q9BUM1 346 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 CDIP1Q9H305 208 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 IPPKQ9H8X2 491 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.77□□□□□ -1.33
CPNE3-213ENST00000622183 LMCD1Q9NZU5 365 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 TNFRSF10DQ9UBN6 386 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 COQ6Q9Y2Z9 468 aa6.77□□□□□ -1.33
CPNE3-213ENST00000622183 M0R2C6 588 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 MSTNO14793 375 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 GSTA4O15217 222 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 GPR39O43194 453 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 MARCH6O60337 910 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 BCL6P41182 706 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 IKZF1Q13422 519 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 SKOR2Q2VWA4 1001 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-213ENST00000622183 TMEM177Q53S58 311 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 RNF219Q5W0B1 726 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-213ENST00000622183 STK11IPQ8N1F8 1099 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 WDR66Q8TBY9 1149 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 PI4K2BQ8TCG2 481 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 PANK1Q8TE04 598 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 LINC01599Q8WXQ3 324 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 DPF3Q92784 378 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 USP7Q93009 1102 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 FBXW5Q969U6 566 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 IFT22Q9H7X7 185 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 BSDC1Q9NW68 430 aaPredicted RBP6.76□□□□□ -1.33
CPNE3-213ENST00000622183 FBXL7Q9UJT9 491 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 PHLDB1Q86UU1 1377 aa6.76□□□□□ -1.33
CPNE3-213ENST00000622183 CCDC66A2RUB6 948 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 FADS2P1A8MWK0 482 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 H7BY64 318 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 NEMP1O14524 444 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 MECP2P51608 486 aaKnown RBP6.75□□□□□ -1.33
CPNE3-213ENST00000622183 GUCY2FP51841 1108 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 DSG1Q02413 1049 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 FAM50AQ14320 339 aaKnown RBP6.75□□□□□ -1.33
CPNE3-213ENST00000622183 ODR4Q5SWX8 454 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 LHFPL2Q6ZUX7 228 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 C16orf59Q7L2K0 433 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 NLRP10Q86W26 655 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 Q8N1Y9 231 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 CHST14Q8NCH0 376 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 SMC1BQ8NDV3 1235 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 SYTL4Q96C24 671 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-213ENST00000622183 HHIPL1Q96JK4 782 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 CABP5Q9NP86 173 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 CLDND1Q9NY35 253 aa6.75□□□□□ -1.33
CPNE3-213ENST00000622183 PPARGC1AQ9UBK2 798 aaKnown RBP6.75□□□□□ -1.33
CPNE3-213ENST00000622183 ZNF891A8MT65 544 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-213ENST00000622183 TRAF5O00463 557 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 GRIK1P39086 918 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 DNM2P50570 870 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 ST5P78524 1137 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 DUSP4Q13115 394 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 INTS5Q6P9B9 1019 aaKnown RBP6.74□□□□□ -1.33
CPNE3-213ENST00000622183 OVCH1Q7RTY7 1134 aa6.74□□□□□ -1.33
CPNE3-213ENST00000622183 SLCO6A1Q86UG4 719 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms