RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 JRKLQ9Y4A0 524 aa17.52■□□□□ 0.39
NPHP4-211ENST00000622020 DOCK2Q92608 1830 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 SRCAPQ6ZRS2 3230 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 STXBP3O00186 592 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 OR52Z1P0C646 297 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 PDCLQ13371 301 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 CACNA2D4Q7Z3S7 1137 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 ZNF444Q8N0Y2 327 aaPredicted RBP17.51■□□□□ 0.39
NPHP4-211ENST00000622020 RUFY1Q96T51 708 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 CAPS2Q9BXY5 557 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 BICDL2A1A5D9 508 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 KCNQ2O43526 872 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 SSBP05455 408 aaKnown RBP eCLIP17.51■□□□□ 0.39
NPHP4-211ENST00000622020 TRADDQ15628 312 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 GRIK5Q16478 980 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 TRIM58Q8NG06 486 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 CCSER1Q9C0I3 900 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 SH2D4AQ9H788 454 aa17.51■□□□□ 0.39
NPHP4-211ENST00000622020 BSDC1Q9NW68 430 aaPredicted RBP17.51■□□□□ 0.39
NPHP4-211ENST00000622020 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.51■□□□□ 0.39
NPHP4-211ENST00000622020 FLT1P17948 1338 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 POTEMA6NI47 508 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 SLC1A4P43007 532 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 TBCKQ8TEA7 893 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 AENQ8WTP8 325 aaKnown RBP17.5■□□□□ 0.39
NPHP4-211ENST00000622020 MTMR8Q96EF0 704 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 RPGRIP1Q96KN7 1286 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 ATP8A2Q9NTI2 1148 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 ARPP21Q9UBL0 812 aaPredicted RBP17.5■□□□□ 0.39
NPHP4-211ENST00000622020 FTCDO95954 541 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 CENPHQ9H3R5 247 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 M0R2N6 131 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 VWA3BQ502W6 1294 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 FAM107BQ9H098 131 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 BARHL2Q9NY43 387 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 NFU1Q9UMS0 254 aa17.5■□□□□ 0.39
NPHP4-211ENST00000622020 ANO9A1A5B4 782 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 FAM153BP0C7A2 387 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-211ENST00000622020 FAM153CQ494X1 144 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 IQCEQ6IPM2 695 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 C8orf74Q6P047 294 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 PAXIP1Q6ZW49 1069 aaPredicted RBP17.49■□□□□ 0.39
NPHP4-211ENST00000622020 NUDT12Q9BQG2 462 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.49■□□□□ 0.39
NPHP4-211ENST00000622020 FAM153AQ9UHL3 310 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 PLAGL2Q9UPG8 496 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 DCCP43146 1447 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 MYMKA6NI61 221 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 CARSP49589 748 aaKnown RBP17.49■□□□□ 0.39
NPHP4-211ENST00000622020 EIF6P56537 245 aaKnown RBP17.49■□□□□ 0.39
NPHP4-211ENST00000622020 FAM114A1Q8IWE2 563 aa17.49■□□□□ 0.39
NPHP4-211ENST00000622020 MMTAG2Q9BU76 263 aaKnown RBP17.49■□□□□ 0.39
NPHP4-211ENST00000622020 ZNF335Q9H4Z2 1342 aaPredicted RBP17.48■□□□□ 0.39
NPHP4-211ENST00000622020 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 EBAG9O00559 213 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 GTF2A1P52655 376 aaPredicted RBP17.48■□□□□ 0.39
NPHP4-211ENST00000622020 TTMPQ5BVD1 217 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 PPM1EQ8WY54 764 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 CDK5RAP3Q96JB5 506 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 PURBQ96QR8 312 aaKnown RBP17.48■□□□□ 0.39
NPHP4-211ENST00000622020 FAM169AQ9Y6X4 670 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 GLI1P08151 1106 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 PAFAH1B1P43034 410 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 RPS8P62241 208 aaKnown RBP17.48■□□□□ 0.39
NPHP4-211ENST00000622020 GUCY2DQ02846 1103 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 NONOQ15233 471 aaKnown RBP eCLIP17.48■□□□□ 0.394e-8■■■■□ 26.3
NPHP4-211ENST00000622020 HAUS3Q68CZ6 603 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 FBXO33Q7Z6M2 555 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 ALS2CR12Q96Q35 445 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 PIGSQ96S52 555 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 GOLPH3Q9H4A6 298 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 FRMPD2Q68DX3 1309 aaPredicted RBP17.48■□□□□ 0.39
NPHP4-211ENST00000622020 ITGB4P16144 1822 aa17.48■□□□□ 0.39
NPHP4-211ENST00000622020 PCP11498 1178 aaKnown RBP17.47■□□□□ 0.39
NPHP4-211ENST00000622020 C12orf60Q5U649 245 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 FBXW10Q5XX13 1052 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 RETREG2Q8NC44 543 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 CALML4Q96GE6 196 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 EPB41L5Q9HCM4 733 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 STIM2Q9P246 746 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 CACNA1SQ13698 1873 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 GRM4Q14833 912 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 TMED8Q6PL24 325 aaPredicted RBP17.47■□□□□ 0.39
NPHP4-211ENST00000622020 SV2BQ7L1I2 683 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 NELFCDQ8IXH7 590 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 NOC3LQ8WTT2 800 aaKnown RBP17.47■□□□□ 0.39
NPHP4-211ENST00000622020 COA7Q96BR5 231 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 CCDC43Q96MW1 224 aaKnown RBP17.47■□□□□ 0.39
NPHP4-211ENST00000622020 ZIM3Q96PE6 472 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 ERGIC2Q96RQ1 377 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 CNNM4Q6P4Q7 775 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 DGKHQ86XP1 1220 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 AMOTL1Q8IY63 956 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 TLR10Q9BXR5 811 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 TSGA10Q9BZW7 698 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 SIK3Q9Y2K2 1263 aa17.47■□□□□ 0.39
NPHP4-211ENST00000622020 HYOU1Q9Y4L1 999 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms