RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CHMP4BP1P59074 171 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 HYIQ5T013 277 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 CC2D1AQ6P1N0 951 aaPredicted RBP10.54□□□□□ -0.72
PDPN-212ENST00000621990 CLEC10AQ8IUN9 316 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 SLC35F6Q8N357 371 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 RAD54LQ92698 747 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 NAPGQ99747 312 aaPredicted RBP10.54□□□□□ -0.72
PDPN-212ENST00000621990 SLF1Q9BQI6 1058 aa10.54□□□□□ -0.72
PDPN-212ENST00000621990 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
PDPN-212ENST00000621990 PSMD14O00487 310 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 GCFC2P16383 781 aaKnown RBP10.53□□□□□ -0.72
PDPN-212ENST00000621990 FAM193AP78312 1265 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 ZBED6P86452 979 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 NLGN1Q8N2Q7 840 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 GUF1Q8N442 669 aaKnown RBP10.53□□□□□ -0.72
PDPN-212ENST00000621990 HAS1Q92839 578 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 CUL5Q93034 780 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 TEKT1Q969V4 418 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 MKL1Q969V6 931 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 CCDC17Q96LX7 622 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 ZDHHC15Q96MV8 337 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 PARD6BQ9BYG5 372 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 LRRC27Q9C0I9 530 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 HAUS4Q9H6D7 363 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 SLC26A4O43511 780 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 ALDH1B1P30837 517 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 HNRNPH3P31942 346 aaKnown RBP10.53□□□□□ -0.72
PDPN-212ENST00000621990 HERVK_113P62684 666 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 FKBP1AP62942 108 aaKnown RBP10.53□□□□□ -0.72
PDPN-212ENST00000621990 PSMD2Q13200 908 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 WHAMMP3Q1A5X7 153 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 CREBRFQ8IUR6 639 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 CCDC170Q8IYT3 715 aa10.53□□□□□ -0.72
PDPN-212ENST00000621990 CCDC151A5D8V7 595 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 F8W031 263 aaPredicted RBP10.52□□□□□ -0.72
PDPN-212ENST00000621990 TBC1D8O95759 1140 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 HLA-DOAP06340 250 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 PLA2G4AP47712 749 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 MRPL12P52815 198 aaKnown RBP10.52□□□□□ -0.72
PDPN-212ENST00000621990 EIF6P56537 245 aaKnown RBP10.52□□□□□ -0.72
PDPN-212ENST00000621990 LRRC63Q05C16 580 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 MCM6Q14566 821 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 SEPT2Q15019 361 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 TEX35Q5T0J7 233 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 KRT27Q7Z3Y8 459 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 MSANTD4Q8NCY6 345 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 HNRNPLLQ8WVV9 542 aaKnown RBP10.52□□□□□ -0.72
PDPN-212ENST00000621990 NAP1L4Q99733 375 aaKnown RBP10.52□□□□□ -0.72
PDPN-212ENST00000621990 MXD3Q9BW11 206 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 GLT8D2Q9H1C3 349 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 EPC1Q9H2F5 836 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 DNAJC18Q9H819 358 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 RAB21Q9UL25 225 aa10.52□□□□□ -0.72
PDPN-212ENST00000621990 POTEMA6NI47 508 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 TRIM37O94972 964 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 TBC1D8BQ0IIM8 1120 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 NFIAQ12857 509 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 BRD3Q15059 726 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 TERF2Q15554 542 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 KIF4BQ2VIQ3 1234 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 KRT79Q5XKE5 535 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 TTBK2Q6IQ55 1244 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 AKT1S1Q96B36 256 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 NUDT12Q9BQG2 462 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 NOC4LQ9BVI4 516 aaKnown RBP10.52□□□□□ -0.73
PDPN-212ENST00000621990 ANKZF1Q9H8Y5 726 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 AGPAT5Q9NUQ2 364 aa10.52□□□□□ -0.73
PDPN-212ENST00000621990 DDX25Q9UHL0 483 aaKnown RBP10.52□□□□□ -0.73
PDPN-212ENST00000621990 EIF3CLB5ME19 914 aaKnown RBP10.51□□□□□ -0.73
PDPN-212ENST00000621990 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 TRIM21P19474 475 aaKnown RBP10.51□□□□□ -0.73
PDPN-212ENST00000621990 PDE6BP35913 854 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 TNNI2P48788 182 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 KRT83P78385 493 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 TSR1Q2NL82 804 aaKnown RBP10.51□□□□□ -0.73
PDPN-212ENST00000621990 PODNQ7Z5L7 613 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 SNX29Q8TEQ0 813 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 HPS3Q969F9 1004 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 MBOAT7Q96N66 472 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 EIF3CQ99613 913 aaKnown RBP10.51□□□□□ -0.73
PDPN-212ENST00000621990 DHX36Q9H2U1 1008 aaKnown RBP10.51□□□□□ -0.73
PDPN-212ENST00000621990 PSTPIP2Q9H939 334 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 SLC39A2Q9NP94 309 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 SIK3Q9Y2K2 1263 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 CYP3A7-CYP3A51PA0A087WV96 503 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 USP17L10C9JJH3 530 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 CYP3A7P24462 503 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 CRKP46108 304 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 MTIF2P46199 727 aaKnown RBP10.51□□□□□ -0.73
PDPN-212ENST00000621990 KLK7P49862 253 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 SCNN1DP51172 638 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 HDLBPQ00341 1268 aaKnown RBP10.51□□□□□ -0.73
PDPN-212ENST00000621990 UBE2SQ16763 222 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 DOK7Q18PE1 504 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 VWA3BQ502W6 1294 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 LRRC55Q6ZSA7 311 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 TRAPPC11Q7Z392 1133 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 KCNK18Q7Z418 384 aa10.51□□□□□ -0.73
PDPN-212ENST00000621990 DCAF4Q8WV16 495 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms