RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 SEPT14Q6ZU15 432 aa23.84■■□□□ 1.41
SMC6-210ENST00000621152 HOMER1Q86YM7 354 aa23.84■■□□□ 1.41
SMC6-210ENST00000621152 PIGSQ96S52 555 aa23.84■■□□□ 1.41
SMC6-210ENST00000621152 IWS1Q96ST2 819 aa23.84■■□□□ 1.41
SMC6-210ENST00000621152 SEZ6LQ9BYH1 1024 aa23.84■■□□□ 1.41
SMC6-210ENST00000621152 RIOX1Q9H6W3 641 aa23.84■■□□□ 1.41
SMC6-210ENST00000621152 GPHNQ9NQX3 736 aaPredicted RBP23.84■■□□□ 1.41
SMC6-210ENST00000621152 POLR3EQ9NVU0 708 aa23.84■■□□□ 1.41
SMC6-210ENST00000621152 STXBP2Q15833 593 aa23.83■■□□□ 1.41
SMC6-210ENST00000621152 SLC35G1Q2M3R5 365 aa23.83■■□□□ 1.41
SMC6-210ENST00000621152 BRDTQ58F21 947 aaPredicted RBP23.83■■□□□ 1.41
SMC6-210ENST00000621152 PPP1R12CQ9BZL4 782 aa23.83■■□□□ 1.41
SMC6-210ENST00000621152 MTMR10Q9NXD2 777 aa23.83■■□□□ 1.41
SMC6-210ENST00000621152 CASC1Q6TDU7 716 aa23.82■■□□□ 1.4
SMC6-210ENST00000621152 TRPV6Q9H1D0 765 aa23.82■■□□□ 1.4
SMC6-210ENST00000621152 SZT2Q5T011 3432 aa23.82■■□□□ 1.4
SMC6-210ENST00000621152 OPLAHO14841 1288 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 SLC27A2O14975 620 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 CYTH3O43739 400 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 ARIH2O95376 493 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 EIF2AK2P19525 551 aaKnown RBP23.81■■□□□ 1.4
SMC6-210ENST00000621152 PURAQ00577 322 aaKnown RBP23.81■■□□□ 1.4
SMC6-210ENST00000621152 TRAF1Q13077 416 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 NECTIN1Q15223 517 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 BMP2KLQ5H9B9 411 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 FAM109BQ6ICB4 259 aaPredicted RBP23.81■■□□□ 1.4
SMC6-210ENST00000621152 CCDC62Q6P9F0 684 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 TMEM199Q8N511 208 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 RNPC3Q96LT9 517 aaKnown RBP23.81■■□□□ 1.4
SMC6-210ENST00000621152 MTG1Q9BT17 334 aaPredicted RBP23.81■■□□□ 1.4
SMC6-210ENST00000621152 ANO2Q9NQ90 1003 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 LRRC37A2A6NM11 1700 aa23.81■■□□□ 1.4
SMC6-210ENST00000621152 PNMA6FA0A0J9YX94 578 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 PRC1O43663 620 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 KPNA6O60684 536 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 NR3C2P08235 984 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 CYP2C18P33260 490 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 MCM5P33992 734 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 HSD17B4P51659 736 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 PPIGQ13427 754 aaKnown RBP eCLIP23.8■■□□□ 1.43e-6■□□□□ 9.8
SMC6-210ENST00000621152 LY6KQ17RY6 165 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 CREB3L3Q68CJ9 461 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 PIBF1Q8WXW3 757 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 LY9Q9HBG7 655 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 PXMP2Q9NR77 195 aa23.8■■□□□ 1.4
SMC6-210ENST00000621152 MAP3K20Q9NYL2 800 aaKnown RBP23.8■■□□□ 1.4
SMC6-210ENST00000621152 A6NJR5 290 aa23.79■■□□□ 1.4
SMC6-210ENST00000621152 B4GALT4O60513 344 aa23.79■■□□□ 1.4
SMC6-210ENST00000621152 EIF3JO75822 258 aaKnown RBP23.79■■□□□ 1.4
SMC6-210ENST00000621152 CSF2RAP15509 400 aa23.79■■□□□ 1.4
SMC6-210ENST00000621152 HOXA13P31271 388 aaPredicted RBP23.79■■□□□ 1.4
SMC6-210ENST00000621152 ZNF654Q8IZM8 581 aa23.79■■□□□ 1.4
SMC6-210ENST00000621152 TMTC2Q8N394 836 aa23.79■■□□□ 1.4
SMC6-210ENST00000621152 SAMD3Q8N6K7 520 aa23.79■■□□□ 1.4
SMC6-210ENST00000621152 MTA3Q9BTC8 594 aa23.79■■□□□ 1.4
SMC6-210ENST00000621152 MYL10Q9BUA6 226 aa23.79■■□□□ 1.4
SMC6-210ENST00000621152 MYCLP12524 364 aaPredicted RBP23.78■■□□□ 1.4
SMC6-210ENST00000621152 NFXL1Q6ZNB6 911 aa23.78■■□□□ 1.4
SMC6-210ENST00000621152 C16orf59Q7L2K0 433 aa23.78■■□□□ 1.4
SMC6-210ENST00000621152 FAM161BQ96MY7 647 aa23.78■■□□□ 1.4
SMC6-210ENST00000621152 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.78■■□□□ 1.44e-19■□□□□ 9.3
SMC6-210ENST00000621152 ALDH8A1Q9H2A2 487 aaPredicted RBP23.78■■□□□ 1.4
SMC6-210ENST00000621152 HIPK3Q9H422 1215 aa23.78■■□□□ 1.4
SMC6-210ENST00000621152 GCOM1H8Y6P7 765 aaPredicted RBP23.77■■□□□ 1.4
SMC6-210ENST00000621152 GH1P01241 217 aa23.77■■□□□ 1.4
SMC6-210ENST00000621152 POLR2MP0CAP2 368 aa23.77■■□□□ 1.4
SMC6-210ENST00000621152 ACRP10323 421 aa23.77■■□□□ 1.4
SMC6-210ENST00000621152 SMAD3P84022 425 aaKnown RBP23.77■■□□□ 1.4
SMC6-210ENST00000621152 GHRHRQ02643 423 aa23.77■■□□□ 1.4
SMC6-210ENST00000621152 NBPF20Q3BBV1 942 aa23.77■■□□□ 1.4
SMC6-210ENST00000621152 CTCFLQ8NI51 663 aaPredicted RBP23.77■■□□□ 1.4
SMC6-210ENST00000621152 AFG1LQ8WV93 481 aa23.77■■□□□ 1.4
SMC6-210ENST00000621152 TMEM87BQ96K49 555 aa23.77■■□□□ 1.4
SMC6-210ENST00000621152 MAP3K14Q99558 947 aa23.77■■□□□ 1.4
SMC6-210ENST00000621152 DDX41Q9UJV9 622 aaKnown RBP23.77■■□□□ 1.4
SMC6-210ENST00000621152 CCDC69A6NI79 296 aa23.76■■□□□ 1.39
SMC6-210ENST00000621152 KIF5BP33176 963 aa23.76■■□□□ 1.39
SMC6-210ENST00000621152 COL9A3Q14050 684 aaPredicted RBP23.76■■□□□ 1.39
SMC6-210ENST00000621152 FAM47CQ5HY64 1035 aa23.76■■□□□ 1.39
SMC6-210ENST00000621152 TMEM240Q5SV17 173 aa23.76■■□□□ 1.39
SMC6-210ENST00000621152 ZNF697Q5TEC3 545 aa23.76■■□□□ 1.39
SMC6-210ENST00000621152 FCHSD1Q86WN1 690 aa23.76■■□□□ 1.39
SMC6-210ENST00000621152 PPP1R13LQ8WUF5 828 aa23.76■■□□□ 1.39
SMC6-210ENST00000621152 PDCD2LQ9BRP1 358 aa23.76■■□□□ 1.39
SMC6-210ENST00000621152 SH2B2O14492 632 aaPredicted RBP23.75■■□□□ 1.39
SMC6-210ENST00000621152 DDAH1O94760 285 aa23.75■■□□□ 1.39
SMC6-210ENST00000621152 SUPT20HL2P0C7V6 817 aa23.75■■□□□ 1.39
SMC6-210ENST00000621152 CCL23P55773 120 aa23.75■■□□□ 1.39
SMC6-210ENST00000621152 CHMP4BP1P59074 171 aa23.75■■□□□ 1.39
SMC6-210ENST00000621152 ARHGAP1Q07960 439 aa23.75■■□□□ 1.39
SMC6-210ENST00000621152 ZNF365Q70YC5 407 aa23.75■■□□□ 1.39
SMC6-210ENST00000621152 NOC4LQ9BVI4 516 aaKnown RBP23.75■■□□□ 1.39
SMC6-210ENST00000621152 TRMT13Q9NUP7 481 aaKnown RBP23.75■■□□□ 1.39
SMC6-210ENST00000621152 STXBP5LQ9Y2K9 1186 aa23.75■■□□□ 1.39
SMC6-210ENST00000621152 MRVI1Q9Y6F6 885 aa23.75■■□□□ 1.39
SMC6-210ENST00000621152 UMODL1Q5DID0 1318 aa23.75■■□□□ 1.39
SMC6-210ENST00000621152 LAMA3Q16787 3333 aa23.75■■□□□ 1.39
SMC6-210ENST00000621152 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.74■■□□□ 1.39
SMC6-210ENST00000621152 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.74■■□□□ 1.39
SMC6-210ENST00000621152 SMARCA1P28370 1054 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms