RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PFDN4Q9NQP4 134 aa9.16□□□□□ -0.94
ALMS1-208ENST00000620466 ARMCX3Q9UH62 379 aaPredicted RBP9.16□□□□□ -0.94
ALMS1-208ENST00000620466 PCDHA13Q9Y5I0 950 aa9.16□□□□□ -0.94
ALMS1-208ENST00000620466 PPFIA4O75335 1185 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 MYL1P05976 194 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 STAT1P42224 750 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 DPF2Q92785 391 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 ABHD10Q9NUJ1 306 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 GDAQ9Y2T3 454 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 LACTBP83111 547 aaPredicted RBP9.15□□□□□ -0.94
ALMS1-208ENST00000620466 SCARF1Q14162 830 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 CASP8Q14790 479 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 MAN2A1Q16706 1144 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 KCTD16Q68DU8 428 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 HOOK2Q96ED9 719 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 RSRC1Q96IZ7 334 aaKnown RBP9.15□□□□□ -0.94
ALMS1-208ENST00000620466 DISC1Q9NRI5 854 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 KIAA1024Q9UPX6 916 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 MORC2Q9Y6X9 1032 aaPredicted RBP9.15□□□□□ -0.94
ALMS1-208ENST00000620466 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 CXCR5P32302 372 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 CCT5P48643 541 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 CC2D1AQ6P1N0 951 aaPredicted RBP9.15□□□□□ -0.94
ALMS1-208ENST00000620466 BEGAINQ9BUH8 593 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 AZI2Q9H6S1 392 aa9.15□□□□□ -0.94
ALMS1-208ENST00000620466 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.15□□□□□ -0.94
ALMS1-208ENST00000620466 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.95
ALMS1-208ENST00000620466 SETD1BQ9UPS6 1966 aaKnown RBP9.15□□□□□ -0.95
ALMS1-208ENST00000620466 PRPF6O94906 941 aaKnown RBP9.15□□□□□ -0.95
ALMS1-208ENST00000620466 EPHB4P54760 987 aa9.15□□□□□ -0.95
ALMS1-208ENST00000620466 CACNB1Q02641 598 aaPredicted RBP9.15□□□□□ -0.95
ALMS1-208ENST00000620466 ITIH3Q06033 890 aa9.15□□□□□ -0.95
ALMS1-208ENST00000620466 ZNF365Q70YC5 407 aa9.15□□□□□ -0.95
ALMS1-208ENST00000620466 CCDC170Q8IYT3 715 aa9.15□□□□□ -0.95
ALMS1-208ENST00000620466 EPC1Q9H2F5 836 aa9.15□□□□□ -0.95
ALMS1-208ENST00000620466 USP17L3A6NCW0 530 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 USP17L4A6NCW7 530 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 TRIM49BA6NDI0 452 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 CIB2O75838 187 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 EIF4A3P38919 411 aaKnown RBP9.14□□□□□ -0.95
ALMS1-208ENST00000620466 USP17L1Q7RTZ2 530 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 CROCCP2Q86T23 111 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 USTQ9Y2C2 406 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 CDHR2Q9BYE9 1310 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 KRT19P08727 400 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 CCNE1P24864 410 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 LIG3P49916 1009 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 ZBED6P86452 979 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 ATP11AP98196 1134 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 ADAT2Q7Z6V5 191 aaKnown RBP9.14□□□□□ -0.95
ALMS1-208ENST00000620466 NIM1KQ8IY84 436 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 EXOC4Q96A65 974 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 PARP2Q9UGN5 583 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 CPDO75976 1380 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 BUB1BO60566 1050 aaPredicted RBP9.14□□□□□ -0.95
ALMS1-208ENST00000620466 DKC1O60832 514 aaKnown RBP eCLIP9.14□□□□□ -0.95
ALMS1-208ENST00000620466 SCNN1DP51172 638 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 METTL16Q86W50 562 aaKnown RBP9.14□□□□□ -0.95
ALMS1-208ENST00000620466 MGARPQ8TDB4 240 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 BRIP1Q9BX63 1249 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 SH3GLB2Q9NR46 395 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 ARL6IP4Q66PJ3 421 aaKnown RBP9.14□□□□□ -0.95
ALMS1-208ENST00000620466 CEP128Q6ZU80 1094 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 ANKRD7Q92527 254 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 ISCA1Q9BUE6 129 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 GINS2Q9Y248 185 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 DIP2BQ9P265 1576 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 A0A0G2JLW4 131 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 SORBS3O60504 671 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 GAS7O60861 476 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 SMCR8Q8TEV9 937 aaPredicted RBP9.14□□□□□ -0.95
ALMS1-208ENST00000620466 EPB41L5Q9HCM4 733 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 MRFAP1Q9Y605 127 aa9.14□□□□□ -0.95
ALMS1-208ENST00000620466 NBPF26B4DH59 902 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 HGSO14964 777 aaPredicted RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 RGS16O15492 202 aaPredicted RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 TEX33O43247 280 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 CTDNEP1O95476 244 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 GUCY1A2P33402 732 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 APBA1Q02410 837 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 NBPF10Q6P3W6 841 aaKnown RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 VPS52Q8N1B4 723 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 NBPF15Q8N660 670 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 MED10Q9BTT4 135 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 TMEM131LA2VDJ0 1609 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 SRGAP2O75044 1071 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 CYP2D6P10635 497 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 HNRNPH2P55795 449 aaKnown RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 EXOC3L4Q17RC7 722 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 XDHP47989 1333 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 HEXIM1O94992 359 aaKnown RBP9.13□□□□□ -0.95
ALMS1-208ENST00000620466 FTCDO95954 541 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 SLC7A5Q01650 507 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 CYP27A1Q02318 531 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 BIRC2Q13490 618 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 ASPRV1Q53RT3 343 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 TEKT1Q969V4 418 aa9.13□□□□□ -0.95
ALMS1-208ENST00000620466 COA7Q96BR5 231 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms