RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 Q9Y3F1 56 aa18.16■□□□□ 0.5
LINC00221-202ENST00000619530 PNMA6FA0A0J9YX94 578 aa18.15■□□□□ 0.5
LINC00221-202ENST00000619530 A0A0U1RQG5 324 aaPredicted RBP18.15■□□□□ 0.5
LINC00221-202ENST00000619530 RBM47A0AV96 593 aaKnown RBP18.15■□□□□ 0.5
LINC00221-202ENST00000619530 EIF2AK2P19525 551 aaKnown RBP18.15■□□□□ 0.5
LINC00221-202ENST00000619530 RXRAP19793 462 aa18.15■□□□□ 0.5
LINC00221-202ENST00000619530 EDNRBP24530 442 aa18.15■□□□□ 0.5
LINC00221-202ENST00000619530 HOXA13P31271 388 aaPredicted RBP18.15■□□□□ 0.5
LINC00221-202ENST00000619530 NKX3-2P78367 333 aa18.15■□□□□ 0.5
LINC00221-202ENST00000619530 FAAP100Q0VG06 881 aa18.15■□□□□ 0.5
LINC00221-202ENST00000619530 SEPT14Q6ZU15 432 aa18.15■□□□□ 0.5
LINC00221-202ENST00000619530 OR6J1Q8NGC5 347 aa18.15■□□□□ 0.5
LINC00221-202ENST00000619530 LRCH3Q96II8 777 aa18.15■□□□□ 0.5
LINC00221-202ENST00000619530 DAXXQ9UER7 740 aaPredicted RBP18.15■□□□□ 0.5
LINC00221-202ENST00000619530 ARVCFO00192 962 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 OPLAHO14841 1288 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 DDAH1O94760 285 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 MYL3P08590 195 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 TXNP10599 105 aaKnown RBP18.14■□□□□ 0.5
LINC00221-202ENST00000619530 RAG1P15918 1043 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 ITGB8P26012 769 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 KIF5BP33176 963 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 PSMC6P62333 389 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 PPP2R5BQ15173 497 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 ANKRD33Q7Z3H0 272 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 CMTR1Q8N1G2 835 aaKnown RBP18.14■□□□□ 0.5
LINC00221-202ENST00000619530 SCFD2Q8WU76 684 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 COPS5Q92905 334 aa18.14■□□□□ 0.5
LINC00221-202ENST00000619530 CDK7P50613 346 aa18.14■□□□□ 0.49
LINC00221-202ENST00000619530 TRAF1Q13077 416 aa18.14■□□□□ 0.49
LINC00221-202ENST00000619530 STXBP2Q15833 593 aa18.14■□□□□ 0.49
LINC00221-202ENST00000619530 TCEANC2Q96MN5 208 aa18.14■□□□□ 0.49
LINC00221-202ENST00000619530 TOX2Q96NM4 488 aa18.14■□□□□ 0.49
LINC00221-202ENST00000619530 NEK1Q96PY6 1258 aa18.14■□□□□ 0.49
LINC00221-202ENST00000619530 IWS1Q96ST2 819 aa18.14■□□□□ 0.49
LINC00221-202ENST00000619530 MAF1Q9H063 256 aa18.14■□□□□ 0.49
LINC00221-202ENST00000619530 SLC12A7Q9Y666 1083 aa18.14■□□□□ 0.49
LINC00221-202ENST00000619530 KIAA0355O15063 1070 aa18.13■□□□□ 0.49
LINC00221-202ENST00000619530 CABYRO75952 493 aa18.13■□□□□ 0.49
LINC00221-202ENST00000619530 MYCLP12524 364 aaPredicted RBP18.13■□□□□ 0.49
LINC00221-202ENST00000619530 HSD17B4P51659 736 aa18.13■□□□□ 0.49
LINC00221-202ENST00000619530 ITGA7Q13683 1181 aa18.13■□□□□ 0.49
LINC00221-202ENST00000619530 TTLL4Q14679 1199 aa18.13■□□□□ 0.49
LINC00221-202ENST00000619530 FCHSD1Q86WN1 690 aa18.13■□□□□ 0.49
LINC00221-202ENST00000619530 RASEFQ8IZ41 740 aa18.13■□□□□ 0.49
LINC00221-202ENST00000619530 RRP36Q96EU6 259 aaKnown RBP18.13■□□□□ 0.49
LINC00221-202ENST00000619530 MTA3Q9BTC8 594 aa18.13■□□□□ 0.49
LINC00221-202ENST00000619530 UPF2Q9HAU5 1272 aaKnown RBP18.13■□□□□ 0.49
LINC00221-202ENST00000619530 PXMP2Q9NR77 195 aa18.13■□□□□ 0.49
LINC00221-202ENST00000619530 GCOM1H8Y6P7 765 aaPredicted RBP18.12■□□□□ 0.49
LINC00221-202ENST00000619530 ARIH2O95376 493 aa18.12■□□□□ 0.49
LINC00221-202ENST00000619530 PLEKHA8P1O95397 391 aa18.12■□□□□ 0.49
LINC00221-202ENST00000619530 NR3C2P08235 984 aa18.12■□□□□ 0.49
LINC00221-202ENST00000619530 POLR2MP0CAP2 368 aa18.12■□□□□ 0.49
LINC00221-202ENST00000619530 CPT1AP50416 773 aa18.12■□□□□ 0.49
LINC00221-202ENST00000619530 CCDC82Q8N4S0 544 aa18.12■□□□□ 0.49
LINC00221-202ENST00000619530 MAP3K14Q99558 947 aa18.12■□□□□ 0.49
LINC00221-202ENST00000619530 MROH7Q68CQ1 1323 aa18.12■□□□□ 0.49
LINC00221-202ENST00000619530 NKRFO15226 690 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC00221-202ENST00000619530 TLR3O15455 904 aaKnown RBP18.11■□□□□ 0.49
LINC00221-202ENST00000619530 CALM1P0DP23 149 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 CALM2P0DP24 149 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 CALM3P0DP25 149 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 LIFRP42702 1097 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 GNAQP50148 359 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 CHMP4BP1P59074 171 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 SHHQ15465 462 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 LY6KQ17RY6 165 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 ADCK5Q3MIX3 580 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 SYNE3Q6ZMZ3 975 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 SRBD1Q8N5C6 995 aaKnown RBP18.11■□□□□ 0.49
LINC00221-202ENST00000619530 ZFP91Q96JP5 570 aaPredicted RBP18.11■□□□□ 0.49
LINC00221-202ENST00000619530 LZTS2Q9BRK4 669 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 POLR3EQ9NVU0 708 aa18.11■□□□□ 0.49
LINC00221-202ENST00000619530 SEC63Q9UGP8 760 aaKnown RBP18.11■□□□□ 0.49
LINC00221-202ENST00000619530 LTBP2Q14767 1821 aa18.1■□□□□ 0.49
LINC00221-202ENST00000619530 hCG_1642624A0A1W2PR95 340 aa18.1■□□□□ 0.49
LINC00221-202ENST00000619530 EIF3JO75822 258 aaKnown RBP18.1■□□□□ 0.49
LINC00221-202ENST00000619530 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
LINC00221-202ENST00000619530 DHX32Q7L7V1 743 aaKnown RBP18.1■□□□□ 0.49
LINC00221-202ENST00000619530 FANCBQ8NB91 859 aa18.1■□□□□ 0.49
LINC00221-202ENST00000619530 PPP1R13LQ8WUF5 828 aa18.1■□□□□ 0.49
LINC00221-202ENST00000619530 SPZ1Q9BXG8 430 aa18.1■□□□□ 0.49
LINC00221-202ENST00000619530 MAP3K20Q9NYL2 800 aaKnown RBP18.1■□□□□ 0.49
LINC00221-202ENST00000619530 GRIN2DO15399 1336 aa18.1■□□□□ 0.49
LINC00221-202ENST00000619530 TIMP1P01033 207 aa18.09■□□□□ 0.49
LINC00221-202ENST00000619530 EXOSC10Q01780 885 aaKnown RBP18.09■□□□□ 0.49
LINC00221-202ENST00000619530 LRIT3Q3SXY7 679 aa18.09■□□□□ 0.49
LINC00221-202ENST00000619530 C9orf50Q5SZB4 431 aa18.09■□□□□ 0.49
LINC00221-202ENST00000619530 CCDC62Q6P9F0 684 aa18.09■□□□□ 0.49
LINC00221-202ENST00000619530 MICU3Q86XE3 530 aa18.09■□□□□ 0.49
LINC00221-202ENST00000619530 FAM126BQ8IXS8 530 aa18.09■□□□□ 0.49
LINC00221-202ENST00000619530 PPP1R12CQ9BZL4 782 aa18.09■□□□□ 0.49
LINC00221-202ENST00000619530 TRPV6Q9H1D0 765 aa18.09■□□□□ 0.49
LINC00221-202ENST00000619530 NAP1L2Q9ULW6 460 aaPredicted RBP18.09■□□□□ 0.49
LINC00221-202ENST00000619530 SEC24BO95487 1268 aa18.08■□□□□ 0.49
LINC00221-202ENST00000619530 SMARCA1P28370 1054 aa18.08■□□□□ 0.49
LINC00221-202ENST00000619530 PURAQ00577 322 aaKnown RBP18.08■□□□□ 0.49
LINC00221-202ENST00000619530 FPGSQ05932 587 aa18.08■□□□□ 0.49
LINC00221-202ENST00000619530 KRT32Q14532 448 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms