RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 IDH1O75874 414 aaKnown RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 MMP1P03956 469 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 PRR29P0C7W0 189 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 RASA1P20936 1047 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 SSTR3P32745 418 aaPredicted RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 IRS1P35568 1242 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 ALDH5A1P51649 535 aaPredicted RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 KLRC3Q07444 240 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 FAM26DQ5JW98 314 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 ZSCAN25Q6NSZ9 544 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 LRRC47Q8N1G4 583 aaKnown RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 DHX38Q92620 1227 aaKnown RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 DDRGK1Q96HY6 314 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 RC3H2Q9HBD1 1191 aaKnown RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 ZNF532Q9HCE3 1301 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 PLXNA4Q9HCM2 1894 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 LCHNA4D1U4 455 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 LGR5O75473 907 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 ICAM1P05362 532 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 LINC00271P0C7V0 271 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 IKBKEQ14164 716 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 CTR9Q6PD62 1173 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 RNF135Q8IUD6 432 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 SAMD3Q8N6K7 520 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 CLP1Q92989 425 aaKnown RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 P2RX5Q93086 422 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 EAF2Q96CJ1 260 aaPredicted RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.48□□□□□ -1.53
SNCA-213ENST00000618500 SEMA4AQ9H3S1 761 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 RNF146Q9NTX7 359 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 TRMT13Q9NUP7 481 aaKnown RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 PRR23AA6NEV1 266 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 TTLL1O95922 423 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 CYP2D6P10635 497 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 GNAT2P19087 354 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 ICAM3P32942 547 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 TICAM2Q86XR7 235 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 SUGP1Q8IWZ8 645 aaKnown RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 SPICE1Q8N0Z3 855 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 BANK1Q8NDB2 785 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 OR6J1Q8NGC5 347 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 DCAF4Q8WV16 495 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 CDCA3Q99618 268 aaPredicted RBP5.48□□□□□ -1.53
SNCA-213ENST00000618500 GTF2IRD1Q9UHL9 959 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 CD207Q9UJ71 328 aa5.48□□□□□ -1.53
SNCA-213ENST00000618500 FANCMQ8IYD8 2048 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 DYNC1LI2O43237 492 aaPredicted RBP5.47□□□□□ -1.53
SNCA-213ENST00000618500 RPLP2P05387 115 aaKnown RBP5.47□□□□□ -1.53
SNCA-213ENST00000618500 BMP3P12645 472 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 KCNA5P22460 613 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 LTBRP36941 435 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 STAT2P52630 851 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 PSMC6P62333 389 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 IRX5P78411 483 aaPredicted RBP5.47□□□□□ -1.53
SNCA-213ENST00000618500 EPC2Q52LR7 807 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 PLEKHG4Q58EX7 1191 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 KRT40Q6A162 431 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 TMEM184AQ6ZMB5 413 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 NEDD1Q8NHV4 660 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 SCFD2Q8WU76 684 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 MTMR4Q9NYA4 1195 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 TLR7Q9NYK1 1049 aaKnown RBP5.47□□□□□ -1.53
SNCA-213ENST00000618500 NBNO60934 754 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 CYP2C9P11712 490 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 CKBP12277 381 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 ATP5JP18859 108 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 DEFB103AP81534 67 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 ADAM15Q13444 863 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 SLC9C2Q5TAH2 1124 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 PDE12Q6L8Q7 609 aaKnown RBP5.47□□□□□ -1.53
SNCA-213ENST00000618500 CCDC62Q6P9F0 684 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 EFHBQ8N7U6 833 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 DYNLL2Q96FJ2 89 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 HAUS7Q99871 368 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 RAVER2Q9HCJ3 691 aaKnown RBP5.47□□□□□ -1.53
SNCA-213ENST00000618500 CTDP1Q9Y5B0 961 aaPredicted RBP5.47□□□□□ -1.53
SNCA-213ENST00000618500 PATJQ8NI35 1801 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 REV3LO60673 3130 aa5.47□□□□□ -1.53
SNCA-213ENST00000618500 F2P00734 622 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 MMP3P08254 477 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 CNTN2Q02246 1040 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 PTGISQ16647 500 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 TCEAL5Q5H9L2 206 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 TMEM192Q8IY95 271 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 UBALD2Q8IYN6 164 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 SUSD6Q92537 303 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 TRERF1Q96PN7 1200 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 C11orf84Q9BUA3 381 aaPredicted RBP5.46□□□□□ -1.53
SNCA-213ENST00000618500 WDR11Q9BZH6 1224 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 FTOQ9C0B1 505 aaKnown RBP eCLIP5.46□□□□□ -1.53
SNCA-213ENST00000618500 ANTXR1Q9H6X2 564 aa5.46□□□□□ -1.53
SNCA-213ENST00000618500 FARP1Q9Y4F1 1045 aaPredicted RBP5.46□□□□□ -1.53
SNCA-213ENST00000618500 EYSQ5T1H1 3165 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 MYH7BA7E2Y1 1941 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 TRIP12Q14669 1992 aaPredicted RBP5.46□□□□□ -1.54
SNCA-213ENST00000618500 RAB11FIP3O75154 756 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 UBE3AQ05086 875 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 HYAL1Q12794 435 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 GPM6BQ13491 265 aa5.46□□□□□ -1.54
SNCA-213ENST00000618500 PPP2R5BQ15173 497 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms