RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 PPP2R5BQ15173 497 aa25.64■■□□□ 1.7
SYNGR3-206ENST00000618464 OR6J1Q8NGC5 347 aa25.64■■□□□ 1.7
SYNGR3-206ENST00000618464 PIBF1Q8WXW3 757 aa25.64■■□□□ 1.7
SYNGR3-206ENST00000618464 PIGSQ96S52 555 aa25.64■■□□□ 1.7
SYNGR3-206ENST00000618464 RMDN3Q96TC7 470 aa25.64■■□□□ 1.7
SYNGR3-206ENST00000618464 LY9Q9HBG7 655 aa25.64■■□□□ 1.7
SYNGR3-206ENST00000618464 OPLAHO14841 1288 aa25.63■■□□□ 1.69
SYNGR3-206ENST00000618464 NECTIN1Q15223 517 aa25.63■■□□□ 1.69
SYNGR3-206ENST00000618464 ZNF654Q8IZM8 581 aa25.63■■□□□ 1.69
SYNGR3-206ENST00000618464 NSUN6Q8TEA1 469 aaKnown RBP25.63■■□□□ 1.69
SYNGR3-206ENST00000618464 SCFD2Q8WU76 684 aa25.63■■□□□ 1.69
SYNGR3-206ENST00000618464 RIOX1Q9H6W3 641 aa25.63■■□□□ 1.69
SYNGR3-206ENST00000618464 PCDHA1Q9Y5I3 950 aa25.63■■□□□ 1.69
SYNGR3-206ENST00000618464 A0A0C4DFX4 3053 aa25.63■■□□□ 1.69
SYNGR3-206ENST00000618464 CYTH3O43739 400 aa25.62■■□□□ 1.69
SYNGR3-206ENST00000618464 MCM5P33992 734 aa25.62■■□□□ 1.69
SYNGR3-206ENST00000618464 PSMC6P62333 389 aa25.62■■□□□ 1.69
SYNGR3-206ENST00000618464 SMAD3P84022 425 aaKnown RBP25.62■■□□□ 1.69
SYNGR3-206ENST00000618464 NFXL1Q6ZNB6 911 aa25.62■■□□□ 1.69
SYNGR3-206ENST00000618464 COPS5Q92905 334 aa25.62■■□□□ 1.69
SYNGR3-206ENST00000618464 MAF1Q9H063 256 aa25.62■■□□□ 1.69
SYNGR3-206ENST00000618464 SEMA6BQ9H3T3 888 aa25.62■■□□□ 1.69
SYNGR3-206ENST00000618464 BAZ2BQ9UIF8 2168 aaKnown RBP25.61■■□□□ 1.69
SYNGR3-206ENST00000618464 CABYRO75952 493 aa25.61■■□□□ 1.69
SYNGR3-206ENST00000618464 EIF2AK2P19525 551 aaKnown RBP25.61■■□□□ 1.69
SYNGR3-206ENST00000618464 FPGSQ05932 587 aa25.61■■□□□ 1.69
SYNGR3-206ENST00000618464 ITGA7Q13683 1181 aa25.61■■□□□ 1.69
SYNGR3-206ENST00000618464 ARHGEF16Q5VV41 709 aa25.61■■□□□ 1.69
SYNGR3-206ENST00000618464 FAM126BQ8IXS8 530 aa25.61■■□□□ 1.69
SYNGR3-206ENST00000618464 TBX21Q9UL17 535 aa25.61■■□□□ 1.69
SYNGR3-206ENST00000618464 SH2B2O14492 632 aaPredicted RBP25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 CDC45O75419 566 aa25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 ARIH2O95376 493 aa25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 MYL3P08590 195 aa25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 TXNP10599 105 aaKnown RBP25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 SEPT14Q6ZU15 432 aa25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 RNPC3Q96LT9 517 aaKnown RBP25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 CDX2Q99626 313 aaPredicted RBP25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 LRRC2Q9BYS8 371 aa25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 TTYH1Q9H313 450 aaPredicted RBP25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 GRIN2DO15399 1336 aa25.6■■□□□ 1.69
SYNGR3-206ENST00000618464 TLR3O15455 904 aaKnown RBP25.59■■□□□ 1.69
SYNGR3-206ENST00000618464 DDAH1O94760 285 aa25.59■■□□□ 1.69
SYNGR3-206ENST00000618464 HOXA13P31271 388 aaPredicted RBP25.59■■□□□ 1.69
SYNGR3-206ENST00000618464 CPT1AP50416 773 aa25.59■■□□□ 1.69
SYNGR3-206ENST00000618464 HSD17B4P51659 736 aa25.59■■□□□ 1.69
SYNGR3-206ENST00000618464 TTLL4Q14679 1199 aa25.59■■□□□ 1.69
SYNGR3-206ENST00000618464 CTCFLQ8NI51 663 aaPredicted RBP25.59■■□□□ 1.69
SYNGR3-206ENST00000618464 TMEM87BQ96K49 555 aa25.59■■□□□ 1.69
SYNGR3-206ENST00000618464 PXMP2Q9NR77 195 aa25.59■■□□□ 1.69
SYNGR3-206ENST00000618464 PNMA6FA0A0J9YX94 578 aa25.58■■□□□ 1.69
SYNGR3-206ENST00000618464 CCDC69A6NI79 296 aa25.58■■□□□ 1.69
SYNGR3-206ENST00000618464 NKRFO15226 690 aaKnown RBP eCLIP25.58■■□□□ 1.69
SYNGR3-206ENST00000618464 TIMP1P01033 207 aa25.58■■□□□ 1.69
SYNGR3-206ENST00000618464 STXBP2Q15833 593 aa25.58■■□□□ 1.69
SYNGR3-206ENST00000618464 RAB11FIP4Q86YS3 637 aa25.58■■□□□ 1.69
SYNGR3-206ENST00000618464 SLC43A3Q8NBI5 491 aa25.58■■□□□ 1.69
SYNGR3-206ENST00000618464 IWS1Q96ST2 819 aa25.58■■□□□ 1.69
SYNGR3-206ENST00000618464 PPP1R12CQ9BZL4 782 aa25.58■■□□□ 1.69
SYNGR3-206ENST00000618464 POLR3EQ9NVU0 708 aa25.58■■□□□ 1.69
SYNGR3-206ENST00000618464 UNC80Q8N2C7 3258 aa25.57■■□□□ 1.68
SYNGR3-206ENST00000618464 RXRAP19793 462 aa25.57■■□□□ 1.68
SYNGR3-206ENST00000618464 RNF20Q5VTR2 975 aa25.57■■□□□ 1.68
SYNGR3-206ENST00000618464 MTA3Q9BTC8 594 aa25.57■■□□□ 1.68
SYNGR3-206ENST00000618464 NR3C2P08235 984 aa25.56■■□□□ 1.68
SYNGR3-206ENST00000618464 KIF5BP33176 963 aa25.56■■□□□ 1.68
SYNGR3-206ENST00000618464 PURAQ00577 322 aaKnown RBP25.56■■□□□ 1.68
SYNGR3-206ENST00000618464 LY6KQ17RY6 165 aa25.56■■□□□ 1.68
SYNGR3-206ENST00000618464 PLEKHA8P1O95397 391 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 CD4P01730 458 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 MYCLP12524 364 aaPredicted RBP25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 GHRHRQ02643 423 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 TRAF1Q13077 416 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 BRDTQ58F21 947 aaPredicted RBP25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 MFSD5Q6N075 450 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 CCDC62Q6P9F0 684 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 TMTC2Q8N394 836 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 PPP1R13LQ8WUF5 828 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 MAP3K14Q99558 947 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 TRPV6Q9H1D0 765 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 CDH23Q9H251 3354 aa25.55■■□□□ 1.68
SYNGR3-206ENST00000618464 GCOM1H8Y6P7 765 aaPredicted RBP25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 POLR2MP0CAP2 368 aa25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 C16orf59Q7L2K0 433 aa25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 FCHSD1Q86WN1 690 aa25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 CMTR1Q8N1G2 835 aaKnown RBP25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 MYLIPQ8WY64 445 aa25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 RRP36Q96EU6 259 aaKnown RBP25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 MTG1Q9BT17 334 aaPredicted RBP25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 SPZ1Q9BXG8 430 aa25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 EYSQ5T1H1 3165 aa25.54■■□□□ 1.68
SYNGR3-206ENST00000618464 B4GALT4O60513 344 aa25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 EIF3JO75822 258 aaKnown RBP25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 NEFLP07196 543 aa25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 LIFRP42702 1097 aa25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 IL31RAQ8NI17 732 aa25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 AFG1LQ8WV93 481 aa25.53■■□□□ 1.68
SYNGR3-206ENST00000618464 TCEANC2Q96MN5 208 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms