RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 BACE1P56817 501 aa19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 TMEM266Q2M3C6 531 aa19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 AXDND1Q5T1B0 1012 aaPredicted RBP19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 JAKMIP3Q5VZ66 844 aa19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 GPAT2Q6NUI2 795 aa19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 SAMD3Q8N6K7 520 aa19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 SHISA4Q96DD7 197 aa19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 TANGO6Q9C0B7 1094 aa19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 GRPEL1Q9HAV7 217 aa19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 FBXO2Q9UK22 296 aaPredicted RBP19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 MKI67P46013 3256 aaKnown RBP19.02■□□□□ 0.64
TRAPPC3-210ENST00000617904 FAM237AA0A1B0GTK4 181 aa19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 CCNT1O60563 726 aaKnown RBP19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 ECM2O94769 699 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 PTPRAP18433 802 aa19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 SPP2Q13103 211 aa19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 LETM2Q2VYF4 491 aa19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 FMR1NBQ8N0W7 255 aaPredicted RBP19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 TBCKQ8TEA7 893 aa19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 TRIM47Q96LD4 638 aa19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 RANBP17Q9H2T7 1088 aaKnown RBP19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 KCNH3Q9ULD8 1083 aa19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 BRCA2P51587 3418 aa19.01■□□□□ 0.63
TRAPPC3-210ENST00000617904 FSD2A1L4K1 749 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 NEMFO60524 1076 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 ZNF202O95125 648 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 MYCP01106 439 aaPredicted RBP19■□□□□ 0.63
TRAPPC3-210ENST00000617904 PSMC4P43686 418 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 NDUFA8P51970 172 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 MCF2L2Q86YR7 1114 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 ELOA2Q8IYF1 753 aaPredicted RBP19■□□□□ 0.63
TRAPPC3-210ENST00000617904 ENGASEQ8NFI3 743 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 RASGRP4Q8TDF6 673 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 AK8Q96MA6 479 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 SRRDQ9UH36 339 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 RABGAP1Q9Y3P9 1069 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 ZHX2Q9Y6X8 837 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 USP11P51784 963 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 MTMR2Q13614 643 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 CAMK4Q16566 473 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 USH1GQ495M9 461 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 EARS2Q5JPH6 523 aaKnown RBP19■□□□□ 0.63
TRAPPC3-210ENST00000617904 CEP57L1Q8IYX8 460 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 CNNM3Q8NE01 707 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 C12orf42Q96LP6 360 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 NAT10Q9H0A0 1025 aaKnown RBP19■□□□□ 0.63
TRAPPC3-210ENST00000617904 GOLPH3LQ9H4A5 285 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 CCDC39Q9UFE4 941 aa19■□□□□ 0.63
TRAPPC3-210ENST00000617904 A0A0G2JLL6 359 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 VWA3AA6NCI4 1184 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 FAM205CA6NFA0 338 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 GCOM1H8Y6P7 765 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 FLOT1O75955 427 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 OR52Z1P0C646 297 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 POLR2MP0CAP2 368 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 BCRP11274 1271 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 OSBPP22059 807 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 CLK2P49760 499 aaKnown RBP18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 SNW1Q13573 536 aaKnown RBP18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 PPP4R3AQ6IN85 833 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 SHC4Q6S5L8 630 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 MOXD1Q6UVY6 613 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 PRRT2Q7Z6L0 340 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 RASSF8Q8NHQ8 419 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 CSRNP2Q9H175 543 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 MAP3K20Q9NYL2 800 aaKnown RBP18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 HPSEQ9Y251 543 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 AFG3L2Q9Y4W6 797 aa18.99■□□□□ 0.63
TRAPPC3-210ENST00000617904 PPP1R11O60927 126 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 ICAM1P05362 532 aa18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 CYP2C8P10632 490 aa18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 UVSSAQ2YD98 709 aa18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 CCDC174Q6PII3 467 aa18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 SAMD1Q6SPF0 538 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 RBM43Q6ZSC3 357 aaKnown RBP18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 PARK7Q99497 189 aaKnown RBP18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 ANO10Q9NW15 660 aa18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 CCPG1Q9ULG6 757 aa18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 STK24Q9Y6E0 443 aa18.98■□□□□ 0.63
TRAPPC3-210ENST00000617904 PIK3CDO00329 1044 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 VCAM1P19320 739 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 HOXD10P28358 340 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 UBA7P41226 1012 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 MTFR1Q15390 333 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 CALCRLQ16602 461 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 HABP4Q5JVS0 413 aaKnown RBP18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 FASTKD5Q7L8L6 764 aaKnown RBP18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 IQUBQ8NA54 791 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 CLIC6Q96NY7 704 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 ANO3Q9BYT9 981 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 MAF1Q9H063 256 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 RPAP3Q9H6T3 665 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 HOXC10Q9NYD6 342 aa18.97■□□□□ 0.63
TRAPPC3-210ENST00000617904 PHIPQ8WWQ0 1821 aa18.96■□□□□ 0.63
TRAPPC3-210ENST00000617904 BAZ2BQ9UIF8 2168 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-210ENST00000617904 MYPNQ86TC9 1320 aa18.96■□□□□ 0.63
TRAPPC3-210ENST00000617904 USP17L15C9J2P7 530 aa18.96■□□□□ 0.63
TRAPPC3-210ENST00000617904 USP17L13C9JLJ4 530 aa18.96■□□□□ 0.63
TRAPPC3-210ENST00000617904 USP17L11C9JVI0 530 aa18.96■□□□□ 0.63
TRAPPC3-210ENST00000617904 USP17L18D6R9N7 530 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms