RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 CEBPZQ03701 1054 aaKnown RBP13.34□□□□□ -0.27
PDPN-211ENST00000617617 ZNF174Q15697 407 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 MUM1L1Q5H9M0 696 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 SNRNP48Q6IEG0 339 aaKnown RBP13.34□□□□□ -0.27
PDPN-211ENST00000617617 AK8Q96MA6 479 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 RNF146Q9NTX7 359 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 DDX19AQ9NUU7 478 aaKnown RBP13.34□□□□□ -0.27
PDPN-211ENST00000617617 FAM155AB1AL88 458 aaPredicted RBP13.33□□□□□ -0.28
PDPN-211ENST00000617617 NEMFO60524 1076 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDPN-211ENST00000617617 FAM160A1Q05DH4 1040 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 SYTL5Q8TDW5 730 aaPredicted RBP13.33□□□□□ -0.28
PDPN-211ENST00000617617 CCDC102AQ96A19 550 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 BTBD7Q9P203 1132 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 CCL15-CCL14A0A0B4J2E2 113 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 GOLGA6L4A6NEF3 574 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 BTBD19C9JJ37 291 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 NFIBO00712 420 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 OR52Z1P0C646 297 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 BCRP11274 1271 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 ALAS1P13196 640 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 SNW1Q13573 536 aaKnown RBP13.33□□□□□ -0.28
PDPN-211ENST00000617617 CCL15Q16663 113 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 SHC4Q6S5L8 630 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 RBM43Q6ZSC3 357 aaKnown RBP13.33□□□□□ -0.28
PDPN-211ENST00000617617 FMR1NBQ8N0W7 255 aaPredicted RBP13.33□□□□□ -0.28
PDPN-211ENST00000617617 PYM1Q9BRP8 204 aaKnown RBP13.33□□□□□ -0.28
PDPN-211ENST00000617617 SPATC1LQ9H0A9 340 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 KCNMB3Q9NPA1 279 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 RBPJLQ9UBG7 517 aa13.33□□□□□ -0.28
PDPN-211ENST00000617617 CCNT1O60563 726 aaKnown RBP13.32□□□□□ -0.28
PDPN-211ENST00000617617 LETM1O95202 739 aaPredicted RBP13.32□□□□□ -0.28
PDPN-211ENST00000617617 MCM7P33993 719 aa13.32□□□□□ -0.28
PDPN-211ENST00000617617 PDIA5Q14554 519 aa13.32□□□□□ -0.28
PDPN-211ENST00000617617 PCNX4Q63HM2 1172 aa13.32□□□□□ -0.28
PDPN-211ENST00000617617 CCAR1Q8IX12 1150 aaKnown RBP13.32□□□□□ -0.28
PDPN-211ENST00000617617 USP25Q9UHP3 1055 aa13.32□□□□□ -0.28
PDPN-211ENST00000617617 RIPK3Q9Y572 518 aa13.32□□□□□ -0.28
PDPN-211ENST00000617617 TMEM88BA6NKF7 163 aa13.32□□□□□ -0.28
PDPN-211ENST00000617617 CCDC183Q5T5S1 534 aa13.32□□□□□ -0.28
PDPN-211ENST00000617617 RNF207Q6ZRF8 634 aa13.32□□□□□ -0.28
PDPN-211ENST00000617617 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
PDPN-211ENST00000617617 LENG9Q96B70 501 aa13.32□□□□□ -0.28
PDPN-211ENST00000617617 MROH8Q9H579 483 aa13.32□□□□□ -0.28
PDPN-211ENST00000617617 STAM2O75886 525 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 CFBP00751 764 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 IL17AQ16552 155 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 LETM2Q2VYF4 491 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 CPXCR1Q8N123 301 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 DNERQ8NFT8 737 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 TBC1D5Q92609 795 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 GOLPH3LQ9H4A5 285 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 DDX25Q9UHL0 483 aaKnown RBP13.31□□□□□ -0.28
PDPN-211ENST00000617617 IGLV3-22A0A075B6J6 115 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 PDHXO00330 501 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 MARCKSP29966 332 aaPredicted RBP13.31□□□□□ -0.28
PDPN-211ENST00000617617 SETQ01105 290 aaPredicted RBP13.31□□□□□ -0.28
PDPN-211ENST00000617617 SLFN12Q8IYM2 578 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 IGSF22Q8N9C0 903 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 FAM20AQ96MK3 541 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 PARK7Q99497 189 aaKnown RBP13.31□□□□□ -0.28
PDPN-211ENST00000617617 TMEM60Q9H2L4 133 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 STK24Q9Y6E0 443 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 TAL1P17542 331 aaPredicted RBP13.31□□□□□ -0.28
PDPN-211ENST00000617617 LIG1P18858 919 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 HOXA13P31271 388 aaPredicted RBP13.31□□□□□ -0.28
PDPN-211ENST00000617617 RPS6P62753 249 aaKnown RBP13.31□□□□□ -0.28
PDPN-211ENST00000617617 CCDC73Q6ZRK6 1079 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 ETNPPLQ8TBG4 499 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 IWS1Q96ST2 819 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 CCSER1Q9C0I3 900 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 COL20A1Q9P218 1284 aa13.31□□□□□ -0.28
PDPN-211ENST00000617617 CTAGE5O15320 804 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 SLC37A4O43826 429 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 ZNF445P59923 1031 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 CALCRLQ16602 461 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 DTHD1Q6ZMT9 781 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 ABRAQ8N0Z2 381 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 FSIP1Q8NA03 581 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 PTPN18Q99952 460 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 MOV10L1Q9BXT6 1211 aaKnown RBP13.3□□□□□ -0.28
PDPN-211ENST00000617617 CSRNP2Q9H175 543 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 CLSTN2Q9H4D0 955 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 PXMP2Q9NR77 195 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 TMEM63CQ9P1W3 806 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 MEIS1O00470 390 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 TDP2O95551 362 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 PFKFB1P16118 471 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 TM4SF4P48230 202 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 ZNF157P51786 506 aaPredicted RBP13.3□□□□□ -0.28
PDPN-211ENST00000617617 SLC30A10Q6XR72 485 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 KCTD17Q8N5Z5 321 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 HAS1Q92839 578 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 A1CFQ9NQ94 594 aaKnown RBP13.3□□□□□ -0.28
PDPN-211ENST00000617617 FAM13BQ9NYF5 915 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 UBIAD1Q9Y5Z9 338 aa13.3□□□□□ -0.28
PDPN-211ENST00000617617 ERVK-9P63128 1117 aa13.29□□□□□ -0.28
PDPN-211ENST00000617617 ERVK-24P63145 666 aa13.29□□□□□ -0.28
PDPN-211ENST00000617617 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms