RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 CHD9Q3L8U1 2897 aa25.89■■□□□ 1.73
NEDD4L-237ENST00000617539 IFIT3O14879 490 aaKnown RBP25.88■■□□□ 1.73
NEDD4L-237ENST00000617539 CPT1AP50416 773 aa25.88■■□□□ 1.73
NEDD4L-237ENST00000617539 GRM4Q14833 912 aa25.88■■□□□ 1.73
NEDD4L-237ENST00000617539 ZNF697Q5TEC3 545 aa25.88■■□□□ 1.73
NEDD4L-237ENST00000617539 CCDC62Q6P9F0 684 aa25.88■■□□□ 1.73
NEDD4L-237ENST00000617539 TTYH1Q9H313 450 aaPredicted RBP25.88■■□□□ 1.73
NEDD4L-237ENST00000617539 RBM8AQ9Y5S9 174 aaKnown RBP25.88■■□□□ 1.73
NEDD4L-237ENST00000617539 NKRFO15226 690 aaKnown RBP eCLIP25.87■■□□□ 1.737e-8■■■□□ 15.3
NEDD4L-237ENST00000617539 TXNP10599 105 aaKnown RBP25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 GHRHRQ02643 423 aa25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 TROAPQ12815 778 aa25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 PPIGQ13427 754 aaKnown RBP eCLIP25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 TMEM240Q5SV17 173 aa25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 RALYLQ86SE5 291 aaKnown RBP25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 MCF2L2Q86YR7 1114 aa25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 MB21D2Q8IYB1 491 aaPredicted RBP25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 NCOA7Q8NI08 942 aa25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 NSUN6Q8TEA1 469 aaKnown RBP25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 RMDN3Q96TC7 470 aa25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 AMNQ9BXJ7 453 aa25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 SEZ6LQ9BYH1 1024 aa25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 ALDH8A1Q9H2A2 487 aaPredicted RBP25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 POLR3EQ9NVU0 708 aa25.87■■□□□ 1.73
NEDD4L-237ENST00000617539 A6NJR5 290 aa25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 B4DLN1 442 aa25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 ZBTB5O15062 677 aa25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 CYTH3O43739 400 aa25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 MYL3P08590 195 aa25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 HSD17B4P51659 736 aa25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 MRPL12P52815 198 aaKnown RBP25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 SKAP1Q86WV1 359 aa25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 TMEM199Q8N511 208 aa25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 NOC4LQ9BVI4 516 aaKnown RBP25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 HIPK3Q9H422 1215 aa25.86■■□□□ 1.73
NEDD4L-237ENST00000617539 PRUNE2Q8WUY3 3088 aa25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 CFBP00751 764 aa25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 ACRP10323 421 aa25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 COL9A3Q14050 684 aaPredicted RBP25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 WTAPQ15007 396 aa25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 RASIP1Q5U651 963 aa25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 IGDCC4Q8TDY8 1250 aa25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 MTG1Q9BT17 334 aaPredicted RBP25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 WNT8AQ9H1J5 351 aa25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 SEMA6BQ9H3T3 888 aa25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 RIOX1Q9H6W3 641 aa25.85■■□□□ 1.73
NEDD4L-237ENST00000617539 EIF2AK2P19525 551 aaKnown RBP25.84■■□□□ 1.73
NEDD4L-237ENST00000617539 TTLL4Q14679 1199 aa25.84■■□□□ 1.73
NEDD4L-237ENST00000617539 SLC17A8Q8NDX2 589 aa25.84■■□□□ 1.73
NEDD4L-237ENST00000617539 PPP1R13LQ8WUF5 828 aa25.84■■□□□ 1.73
NEDD4L-237ENST00000617539 IWS1Q96ST2 819 aa25.84■■□□□ 1.73
NEDD4L-237ENST00000617539 LSG1Q9H089 658 aaKnown RBP25.84■■□□□ 1.73
NEDD4L-237ENST00000617539 PXMP2Q9NR77 195 aa25.84■■□□□ 1.73
NEDD4L-237ENST00000617539 TRMT13Q9NUP7 481 aaKnown RBP25.84■■□□□ 1.73
NEDD4L-237ENST00000617539 LY6KQ17RY6 165 aa25.83■■□□□ 1.73
NEDD4L-237ENST00000617539 TMEM67Q5HYA8 995 aa25.83■■□□□ 1.73
NEDD4L-237ENST00000617539 SEPT14Q6ZU15 432 aa25.83■■□□□ 1.73
NEDD4L-237ENST00000617539 ZNF365Q70YC5 407 aa25.83■■□□□ 1.73
NEDD4L-237ENST00000617539 HOMER1Q86YM7 354 aa25.83■■□□□ 1.73
NEDD4L-237ENST00000617539 VWCEQ96DN2 955 aa25.83■■□□□ 1.73
NEDD4L-237ENST00000617539 PIGSQ96S52 555 aa25.83■■□□□ 1.73
NEDD4L-237ENST00000617539 GPHNQ9NQX3 736 aaPredicted RBP25.83■■□□□ 1.73
NEDD4L-237ENST00000617539 PCDHA1Q9Y5I3 950 aa25.83■■□□□ 1.73
NEDD4L-237ENST00000617539 ERICH2A1L162 156 aa25.82■■□□□ 1.72
NEDD4L-237ENST00000617539 CCL23P55773 120 aa25.82■■□□□ 1.72
NEDD4L-237ENST00000617539 ARHGAP1Q07960 439 aa25.82■■□□□ 1.72
NEDD4L-237ENST00000617539 STXBP2Q15833 593 aa25.82■■□□□ 1.72
NEDD4L-237ENST00000617539 ARHGEF16Q5VV41 709 aa25.82■■□□□ 1.72
NEDD4L-237ENST00000617539 CDX2Q99626 313 aaPredicted RBP25.82■■□□□ 1.72
NEDD4L-237ENST00000617539 ESYT1Q9BSJ8 1104 aa25.82■■□□□ 1.72
NEDD4L-237ENST00000617539 IL23AQ9NPF7 189 aa25.82■■□□□ 1.72
NEDD4L-237ENST00000617539 GBF1Q92538 1859 aa25.82■■□□□ 1.72
NEDD4L-237ENST00000617539 SCN5AQ14524 2016 aa25.81■■□□□ 1.72
NEDD4L-237ENST00000617539 MYH7BA7E2Y1 1941 aa25.81■■□□□ 1.72
NEDD4L-237ENST00000617539 CYP2C9P11712 490 aa25.81■■□□□ 1.72
NEDD4L-237ENST00000617539 SART3Q15020 963 aaKnown RBP25.81■■□□□ 1.72
NEDD4L-237ENST00000617539 NBPF20Q3BBV1 942 aa25.81■■□□□ 1.72
NEDD4L-237ENST00000617539 LY9Q9HBG7 655 aa25.81■■□□□ 1.72
NEDD4L-237ENST00000617539 TANC1Q9C0D5 1861 aa25.81■■□□□ 1.72
NEDD4L-237ENST00000617539 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.8■■□□□ 1.72
NEDD4L-237ENST00000617539 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.8■■□□□ 1.72
NEDD4L-237ENST00000617539 NR3C2P08235 984 aa25.8■■□□□ 1.72
NEDD4L-237ENST00000617539 HOXA13P31271 388 aaPredicted RBP25.8■■□□□ 1.72
NEDD4L-237ENST00000617539 BRDTQ58F21 947 aaPredicted RBP25.8■■□□□ 1.72
NEDD4L-237ENST00000617539 PSRC1Q6PGN9 363 aaPredicted RBP25.8■■□□□ 1.72
NEDD4L-237ENST00000617539 AFG1LQ8WV93 481 aa25.8■■□□□ 1.72
NEDD4L-237ENST00000617539 CHD7Q9P2D1 2997 aa25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 GRXCR1A8MXD5 290 aa25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 KPNA6O60684 536 aa25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 EIF3JO75822 258 aaKnown RBP25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 RGS20O76081 388 aa25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 MMP3P08254 477 aa25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 DNAJB2P25686 324 aa25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 CATIPQ7Z7H3 387 aa25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 IL31RAQ8NI17 732 aa25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 PDCD2LQ9BRP1 358 aa25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 MYL10Q9BUA6 226 aa25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 CXXC1Q9P0U4 656 aaPredicted RBP25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 DDX41Q9UJV9 622 aaKnown RBP25.79■■□□□ 1.72
NEDD4L-237ENST00000617539 SLC27A2O14975 620 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms