RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 TOP1P11387 765 aaKnown RBP17.26■□□□□ 0.35
UBXN1-218ENST00000616865 SMPD1P17405 629 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 EXOSC10Q01780 885 aaKnown RBP17.26■□□□□ 0.35
UBXN1-218ENST00000616865 SYNE3Q6ZMZ3 975 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 Q6ZUG5 572 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 DGKHQ86XP1 1220 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 ENAHQ8N8S7 591 aaPredicted RBP17.26■□□□□ 0.35
UBXN1-218ENST00000616865 HERVK_113Q902F9 699 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 CHMP4CQ96CF2 233 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 IL17RAQ96F46 866 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 HIPK3Q9H422 1215 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 PRDM6Q9NQX0 595 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 PRR12Q9ULL5 1215 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 DDX49Q9Y6V7 483 aaKnown RBP17.26■□□□□ 0.35
UBXN1-218ENST00000616865 CHD9Q3L8U1 2897 aa17.26■□□□□ 0.35
UBXN1-218ENST00000616865 UMODL1Q5DID0 1318 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 ST18O60284 1047 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 PTGS1P23219 599 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 ITGA7Q13683 1181 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 ANKRD1Q15327 319 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 RAB30Q15771 203 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 MUM1L1Q5H9M0 696 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 RCSD1Q6JBY9 416 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 FBXO16Q8IX29 292 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-218ENST00000616865 AP5M1Q9H0R1 490 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 MTIF3Q9H2K0 278 aaKnown RBP17.25■□□□□ 0.35
UBXN1-218ENST00000616865 PRDM12Q9H4Q4 367 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 PDGFCQ9NRA1 345 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 CYP39A1Q9NYL5 469 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 CXXC1Q9P0U4 656 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-218ENST00000616865 MTMR7Q9Y216 660 aa17.25■□□□□ 0.35
UBXN1-218ENST00000616865 GRIN2DO15399 1336 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 SH2B2O14492 632 aaPredicted RBP17.24■□□□□ 0.35
UBXN1-218ENST00000616865 ZEB2O60315 1214 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 SNAP25P60880 206 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 TAPT1Q6NXT6 567 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 EEPD1Q7L9B9 569 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 CATIPQ7Z7H3 387 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 IGDCC4Q8TDY8 1250 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 KIF2CQ99661 725 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 TMEM47Q9BQJ4 181 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 SEZ6LQ9BYH1 1024 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 VTA1Q9NP79 307 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 CCPG1Q9ULG6 757 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 Q9Y3F1 56 aa17.24■□□□□ 0.35
UBXN1-218ENST00000616865 DYNC1LI2O43237 492 aaPredicted RBP17.23■□□□□ 0.35
UBXN1-218ENST00000616865 B4GALT4O60513 344 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 FGBP02675 491 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 LIFRP42702 1097 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 NOVP48745 357 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 COL9A3Q14050 684 aaPredicted RBP17.23■□□□□ 0.35
UBXN1-218ENST00000616865 SEC23AQ15436 765 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 TMEM63BQ5T3F8 832 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 IQSEC1Q6DN90 963 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 NSMFQ6X4W1 530 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 PNMA1Q8ND90 353 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 MORC4Q8TE76 937 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 BRF1Q92994 677 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 NOC4LQ9BVI4 516 aaKnown RBP17.23■□□□□ 0.35
UBXN1-218ENST00000616865 WNT8AQ9H1J5 351 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 LY9Q9HBG7 655 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 GPHNQ9NQX3 736 aaPredicted RBP17.23■□□□□ 0.35
UBXN1-218ENST00000616865 MSRAQ9UJ68 235 aa17.23■□□□□ 0.35
UBXN1-218ENST00000616865 ICAM1P05362 532 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 CCL23P55773 120 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 PSMC6P62333 389 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 DCAF4Q8WV16 495 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 PPM1EQ8WY54 764 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 ANKS1AQ92625 1134 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 PURBQ96QR8 312 aaKnown RBP17.22■□□□□ 0.35
UBXN1-218ENST00000616865 TRPV6Q9H1D0 765 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 RANBP17Q9H2T7 1088 aaKnown RBP17.22■□□□□ 0.35
UBXN1-218ENST00000616865 NKX2-4Q9H2Z4 354 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 THEGQ9P2T0 379 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 TANC1Q9C0D5 1861 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 CHD7Q9P2D1 2997 aa17.22■□□□□ 0.35
UBXN1-218ENST00000616865 KLF18A0A0U1RQI7 1052 aa17.21■□□□□ 0.35
UBXN1-218ENST00000616865 APOBRQ0VD83 1088 aa17.21■□□□□ 0.35
UBXN1-218ENST00000616865 ADGRE1Q14246 886 aa17.21■□□□□ 0.35
UBXN1-218ENST00000616865 CCDC96Q2M329 555 aa17.21■□□□□ 0.35
UBXN1-218ENST00000616865 OTOP2Q7RTS6 562 aa17.21■□□□□ 0.35
UBXN1-218ENST00000616865 YBX2Q9Y2T7 364 aaKnown RBP17.21■□□□□ 0.35
UBXN1-218ENST00000616865 TNFRSF10AO00220 468 aa17.2■□□□□ 0.34
UBXN1-218ENST00000616865 CALM1P0DP23 149 aa17.2■□□□□ 0.34
UBXN1-218ENST00000616865 CALM2P0DP24 149 aa17.2■□□□□ 0.34
UBXN1-218ENST00000616865 CALM3P0DP25 149 aa17.2■□□□□ 0.34
UBXN1-218ENST00000616865 ALDH5A1P51649 535 aaPredicted RBP17.2■□□□□ 0.34
UBXN1-218ENST00000616865 AK2P54819 239 aa17.2■□□□□ 0.34
UBXN1-218ENST00000616865 DUSP28Q4G0W2 176 aa17.2■□□□□ 0.34
UBXN1-218ENST00000616865 ZNF654Q8IZM8 581 aa17.2■□□□□ 0.34
UBXN1-218ENST00000616865 ATXN2LQ8WWM7 1075 aaKnown RBP17.2■□□□□ 0.34
UBXN1-218ENST00000616865 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
UBXN1-218ENST00000616865 SLC28A3Q9HAS3 691 aa17.2■□□□□ 0.34
UBXN1-218ENST00000616865 ADD3Q9UEY8 706 aaKnown RBP17.2■□□□□ 0.34
UBXN1-218ENST00000616865 LOC102724159A0A0B4J2E5 919 aa17.19■□□□□ 0.34
UBXN1-218ENST00000616865 GOLGA8BA8MQT2 603 aa17.19■□□□□ 0.34
UBXN1-218ENST00000616865 NFIBO00712 420 aa17.19■□□□□ 0.34
UBXN1-218ENST00000616865 ZBTB43O43298 467 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms