RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 A0A1B0GTH6 734 aa21.49■■□□□ 1.03
MMP28-204ENST00000615136 TBC1D12O60347 775 aa21.49■■□□□ 1.03
MMP28-204ENST00000615136 FXR2P51116 673 aaKnown RBP eCLIP21.49■■□□□ 1.03
MMP28-204ENST00000615136 GRB10Q13322 594 aa21.49■■□□□ 1.03
MMP28-204ENST00000615136 SPATA1Q5VX52 437 aa21.49■■□□□ 1.03
MMP28-204ENST00000615136 FBXO11Q86XK2 927 aa21.49■■□□□ 1.03
MMP28-204ENST00000615136 PNMA5Q96PV4 448 aa21.49■■□□□ 1.03
MMP28-204ENST00000615136 ANO3Q9BYT9 981 aa21.49■■□□□ 1.03
MMP28-204ENST00000615136 ARHGEF10LQ9HCE6 1279 aa21.49■■□□□ 1.03
MMP28-204ENST00000615136 LRWD1Q9UFC0 647 aa21.49■■□□□ 1.03
MMP28-204ENST00000615136 ARHGAP6O43182 974 aa21.48■■□□□ 1.03
MMP28-204ENST00000615136 CAP2P40123 477 aa21.48■■□□□ 1.03
MMP28-204ENST00000615136 RASA3Q14644 834 aa21.48■■□□□ 1.03
MMP28-204ENST00000615136 KMT5BQ4FZB7 885 aa21.48■■□□□ 1.03
MMP28-204ENST00000615136 ZNF658Q5TYW1 1059 aaPredicted RBP21.48■■□□□ 1.03
MMP28-204ENST00000615136 APTXQ7Z2E3 356 aaKnown RBP21.48■■□□□ 1.03
MMP28-204ENST00000615136 L2HGDHQ9H9P8 463 aa21.48■■□□□ 1.03
MMP28-204ENST00000615136 GOLGA8FQ08AF8 430 aa21.48■■□□□ 1.03
MMP28-204ENST00000615136 GOLGA8DPQ0D2H9 430 aa21.48■■□□□ 1.03
MMP28-204ENST00000615136 NR1I3Q14994 352 aa21.48■■□□□ 1.03
MMP28-204ENST00000615136 SAMD7Q7Z3H4 446 aa21.48■■□□□ 1.03
MMP28-204ENST00000615136 PRCPP42785 496 aa21.47■■□□□ 1.03
MMP28-204ENST00000615136 CDKAL1Q5VV42 579 aa21.47■■□□□ 1.03
MMP28-204ENST00000615136 TC2NQ8N9U0 490 aa21.47■■□□□ 1.03
MMP28-204ENST00000615136 NLGN2Q8NFZ4 835 aa21.47■■□□□ 1.03
MMP28-204ENST00000615136 ERO1AQ96HE7 468 aa21.47■■□□□ 1.03
MMP28-204ENST00000615136 BLOC1S4Q9NUP1 217 aa21.47■■□□□ 1.03
MMP28-204ENST00000615136 ZNF215Q9UL58 517 aaPredicted RBP21.47■■□□□ 1.03
MMP28-204ENST00000615136 ZNF280AP59817 542 aaPredicted RBP21.46■■□□□ 1.03
MMP28-204ENST00000615136 TNIP1Q15025 636 aa21.46■■□□□ 1.03
MMP28-204ENST00000615136 TEPSINQ96N21 525 aa21.46■■□□□ 1.03
MMP28-204ENST00000615136 HOXA13P31271 388 aaPredicted RBP21.46■■□□□ 1.03
MMP28-204ENST00000615136 PTGER2P43116 358 aa21.46■■□□□ 1.03
MMP28-204ENST00000615136 GMPSP49915 693 aaPredicted RBP21.46■■□□□ 1.03
MMP28-204ENST00000615136 STAT2P52630 851 aa21.46■■□□□ 1.03
MMP28-204ENST00000615136 MAP3K10Q02779 954 aa21.46■■□□□ 1.03
MMP28-204ENST00000615136 ECM1Q16610 540 aa21.46■■□□□ 1.03
MMP28-204ENST00000615136 SYT10Q6XYQ8 523 aa21.46■■□□□ 1.03
MMP28-204ENST00000615136 CRYGNQ8WXF5 182 aa21.46■■□□□ 1.03
MMP28-204ENST00000615136 TRIM9Q9C026 710 aa21.46■■□□□ 1.03
MMP28-204ENST00000615136 SYNPO2Q9UMS6 1093 aa21.46■■□□□ 1.03
MMP28-204ENST00000615136 PHLPP2Q6ZVD8 1323 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 STX10O60499 249 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 ETF1P62495 437 aaKnown RBP21.45■■□□□ 1.02
MMP28-204ENST00000615136 KCNK18Q7Z418 384 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 RMND1Q9NWS8 449 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 GJA3Q9Y6H8 435 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 PHF20L1A8MW92 1017 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 SLU7O95391 586 aaKnown RBP21.45■■□□□ 1.02
MMP28-204ENST00000615136 NAA30Q147X3 362 aaPredicted RBP21.45■■□□□ 1.02
MMP28-204ENST00000615136 TBC1D10BQ4KMP7 808 aaPredicted RBP21.45■■□□□ 1.02
MMP28-204ENST00000615136 REXO1L1PQ8IX06 675 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 MICALL2Q8IY33 904 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 NELFBQ8WX92 580 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 TBC1D5Q92609 795 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 BAG1Q99933 345 aaPredicted RBP21.45■■□□□ 1.02
MMP28-204ENST00000615136 VCPKMTQ9H867 229 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 GOPCQ9HD26 462 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 FBXO28Q9NVF7 368 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 CD2APQ9Y5K6 639 aa21.45■■□□□ 1.02
MMP28-204ENST00000615136 TRIM49BA6NDI0 452 aa21.44■■□□□ 1.02
MMP28-204ENST00000615136 MMP14P50281 582 aa21.44■■□□□ 1.02
MMP28-204ENST00000615136 PMS1P54277 932 aaKnown RBP21.44■■□□□ 1.02
MMP28-204ENST00000615136 PAK1Q13153 545 aa21.44■■□□□ 1.02
MMP28-204ENST00000615136 PDIA5Q14554 519 aa21.44■■□□□ 1.02
MMP28-204ENST00000615136 TMEM266Q2M3C6 531 aa21.44■■□□□ 1.02
MMP28-204ENST00000615136 CALML4Q96GE6 196 aa21.44■■□□□ 1.02
MMP28-204ENST00000615136 GLT8D2Q9H1C3 349 aa21.44■■□□□ 1.02
MMP28-204ENST00000615136 CUEDC2Q9H467 287 aa21.44■■□□□ 1.02
MMP28-204ENST00000615136 CGNQ9P2M7 1197 aaKnown RBP21.44■■□□□ 1.02
MMP28-204ENST00000615136 RWDD2AQ9UIY3 292 aa21.44■■□□□ 1.02
MMP28-204ENST00000615136 ATAD5Q96QE3 1844 aa21.44■■□□□ 1.02
MMP28-204ENST00000615136 TEX33O43247 280 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 ZSCAN12O43309 604 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 RHOBTB3O94955 611 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 DGKZQ13574 1117 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 MCM6Q14566 821 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 KCNB1Q14721 858 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 CCDC174Q6PII3 467 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 TRIM65Q6PJ69 517 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 SAMD1Q6SPF0 538 aaPredicted RBP21.43■■□□□ 1.02
MMP28-204ENST00000615136 ADSSL1Q8N142 457 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 SNX29Q8TEQ0 813 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 KIFC2Q96AC6 838 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 GCFC2P16383 781 aaKnown RBP21.43■■□□□ 1.02
MMP28-204ENST00000615136 PBX1P40424 430 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 ARHGAP4P98171 946 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 HPS3Q969F9 1004 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 CTAGE1Q96RT6 745 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 ARID3AQ99856 593 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 C7orf25Q9BPX7 421 aa21.43■■□□□ 1.02
MMP28-204ENST00000615136 ADD3Q9UEY8 706 aaKnown RBP21.43■■□□□ 1.02
MMP28-204ENST00000615136 MYL1P05976 194 aa21.42■■□□□ 1.02
MMP28-204ENST00000615136 USP11P51784 963 aa21.42■■□□□ 1.02
MMP28-204ENST00000615136 AP3B2Q13367 1082 aa21.42■■□□□ 1.02
MMP28-204ENST00000615136 MBOAT7Q96N66 472 aa21.42■■□□□ 1.02
MMP28-204ENST00000615136 MAGEF1Q9HAY2 307 aa21.42■■□□□ 1.02
MMP28-204ENST00000615136 KCNMB3Q9NPA1 279 aa21.42■■□□□ 1.02
MMP28-204ENST00000615136 PPP2R2CQ9Y2T4 447 aa21.42■■□□□ 1.02
MMP28-204ENST00000615136 ZNF541Q9H0D2 1346 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms