RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 CNOT6LQ96LI5 555 aaKnown RBP16.16■□□□□ 0.18
SNPH-203ENST00000614659 DESI2Q9BSY9 194 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 CCDC160A6NGH7 325 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 ATF7P17544 494 aaPredicted RBP16.16■□□□□ 0.18
SNPH-203ENST00000614659 ZNF827Q17R98 1081 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 CCDC170Q8IYT3 715 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 SEC31BQ9NQW1 1179 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 GAP43P17677 238 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 COPB2P35606 906 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 ZBTB16Q05516 673 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 LCORLQ8N3X6 602 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 TTLL11Q8NHH1 800 aa16.16■□□□□ 0.18
SNPH-203ENST00000614659 INPP5BP32019 993 aa16.15■□□□□ 0.18
SNPH-203ENST00000614659 LONRF3Q496Y0 759 aa16.15■□□□□ 0.18
SNPH-203ENST00000614659 ODR4Q5SWX8 454 aa16.15■□□□□ 0.18
SNPH-203ENST00000614659 NRBP1Q9UHY1 535 aa16.15■□□□□ 0.18
SNPH-203ENST00000614659 SPATA31A5Q5VU36 1347 aa16.15■□□□□ 0.18
SNPH-203ENST00000614659 SPATA31A7Q8IWB4 1347 aa16.15■□□□□ 0.18
SNPH-203ENST00000614659 GPKOWQ92917 476 aaPredicted RBP eCLIP16.15■□□□□ 0.18
SNPH-203ENST00000614659 TUBGCP2Q9BSJ2 902 aa16.15■□□□□ 0.18
SNPH-203ENST00000614659 ORC2Q13416 577 aaPredicted RBP16.15■□□□□ 0.18
SNPH-203ENST00000614659 KIF2CQ99661 725 aa16.15■□□□□ 0.18
SNPH-203ENST00000614659 PIH1D3Q9NQM4 214 aaKnown RBP16.15■□□□□ 0.18
SNPH-203ENST00000614659 ASNSP08243 561 aa16.15■□□□□ 0.18
SNPH-203ENST00000614659 INTS8Q75QN2 995 aaKnown RBP16.15■□□□□ 0.18
SNPH-203ENST00000614659 LARP4BQ92615 738 aaKnown RBP16.15■□□□□ 0.18
SNPH-203ENST00000614659 STRBPQ96SI9 672 aaKnown RBP16.15■□□□□ 0.18
SNPH-203ENST00000614659 CASP14P31944 242 aa16.14■□□□□ 0.18
SNPH-203ENST00000614659 FYB2Q5VWT5 728 aa16.14■□□□□ 0.18
SNPH-203ENST00000614659 ZNF526Q8TF50 670 aaPredicted RBP16.14■□□□□ 0.18
SNPH-203ENST00000614659 GRK7Q8WTQ7 553 aa16.14■□□□□ 0.18
SNPH-203ENST00000614659 STIM2Q9P246 746 aa16.14■□□□□ 0.18
SNPH-203ENST00000614659 SUGT1Q9Y2Z0 365 aa16.14■□□□□ 0.18
SNPH-203ENST00000614659 DDX39AO00148 427 aaKnown RBP16.14■□□□□ 0.17
SNPH-203ENST00000614659 TBC1D7Q9P0N9 293 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 GINS2Q9Y248 185 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 FAM193BQ96PV7 902 aaPredicted RBP16.14■□□□□ 0.17
SNPH-203ENST00000614659 ZSWIM5Q9P217 1185 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 CPSF2Q9P2I0 782 aaKnown RBP16.14■□□□□ 0.17
SNPH-203ENST00000614659 FBXO40Q9UH90 709 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 HARSP12081 509 aaKnown RBP16.14■□□□□ 0.17
SNPH-203ENST00000614659 MAN2A1Q16706 1144 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 C10orf76Q5T2E6 689 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 ELMSAN1Q6PJG2 1045 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 AGTPBP1Q9UPW5 1226 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 KIDINS220Q9ULH0 1771 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 KLHL7Q8IXQ5 586 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 PPFIBP2Q8ND30 876 aa16.14■□□□□ 0.17
SNPH-203ENST00000614659 DPH6Q7L8W6 267 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 PLA2G4DQ86XP0 818 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 XPOTO43592 962 aaKnown RBP16.13■□□□□ 0.17
SNPH-203ENST00000614659 YARSP54577 528 aaKnown RBP16.13■□□□□ 0.17
SNPH-203ENST00000614659 RBL2Q08999 1139 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 CRAMP1Q96RY5 1269 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 NLRC4Q9NPP4 1024 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 SERPINA10Q9UK55 444 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 SMIM23A6NLE4 172 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 ECE2O60344 883 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 GAS8O95995 478 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 BMP3P12645 472 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 HPDP32754 393 aaPredicted RBP16.13■□□□□ 0.17
SNPH-203ENST00000614659 DGKHQ86XP1 1220 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 MB21D2Q8IYB1 491 aaPredicted RBP16.13■□□□□ 0.17
SNPH-203ENST00000614659 LRRC47Q8N1G4 583 aaKnown RBP16.13■□□□□ 0.17
SNPH-203ENST00000614659 PPP2R5AQ15172 486 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 RABL6Q3YEC7 729 aaPredicted RBP16.13■□□□□ 0.17
SNPH-203ENST00000614659 DENND2CQ68D51 928 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 ATP6V0A1Q93050 837 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 CFAP57Q96MR6 1250 aa16.13■□□□□ 0.17
SNPH-203ENST00000614659 CCND2P30279 289 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 KCNQ4P56696 695 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 LONRF2Q1L5Z9 754 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 TXNDC16Q9P2K2 825 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 AXIN2Q9Y2T1 843 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 VIMP08670 466 aaKnown RBP16.12■□□□□ 0.17
SNPH-203ENST00000614659 ATP11AP98196 1134 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 U2AF1L4Q8WU68 220 aaKnown RBP16.12■□□□□ 0.17
SNPH-203ENST00000614659 PAGE5Q96GU1 130 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 CPS1P31327 1500 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 TSC1Q92574 1164 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 CD2APQ9Y5K6 639 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 ARHGEF37A1IGU5 675 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 ADAM9Q13443 819 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 TMEM179Q6ZVK1 233 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 TPH2Q8IWU9 490 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 FNBP4Q8N3X1 1017 aaPredicted RBP16.12■□□□□ 0.17
SNPH-203ENST00000614659 FAM81BQ96LP2 452 aa16.12■□□□□ 0.17
SNPH-203ENST00000614659 FRMPD2Q68DX3 1309 aaPredicted RBP16.12■□□□□ 0.17
SNPH-203ENST00000614659 H2AFZP0C0S5 128 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 LMNB1P20700 586 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 PTPREP23469 700 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 CCNE1P24864 410 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 MCAMP43121 646 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 RASGRF1Q13972 1273 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 H2AFVQ71UI9 128 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 ISCA1Q9BUE6 129 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 ADGRB1O14514 1584 aa16.11■□□□□ 0.17
SNPH-203ENST00000614659 STAT2P52630 851 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms