RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 GOLGA8BA8MQT2 603 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 ZBTB43O43298 467 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 SORBS3O60504 671 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 ADD1P35611 737 aaKnown RBP14.66□□□□□ -0.06
CSTF1-208ENST00000613138 ACLYP53396 1101 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 GJA9P57773 515 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 TOB2Q14106 344 aaPredicted RBP14.66□□□□□ -0.06
CSTF1-208ENST00000613138 RTN1Q16799 776 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 TYW1BQ6NUM6 668 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 USP17L6PQ6QN14 398 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 SEPT14Q6ZU15 432 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 SH3RF1Q7Z6J0 888 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 RNF180Q86T96 592 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 TLK2Q86UE8 772 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 RRP36Q96EU6 259 aaKnown RBP14.66□□□□□ -0.06
CSTF1-208ENST00000613138 WDR11Q9BZH6 1224 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 VTA1Q9NP79 307 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 PXMP2Q9NR77 195 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 PNMA2Q9UL42 364 aa14.66□□□□□ -0.06
CSTF1-208ENST00000613138 ADAMTS3O15072 1205 aa14.65□□□□□ -0.06
CSTF1-208ENST00000613138 ASGR1P07306 291 aa14.65□□□□□ -0.06
CSTF1-208ENST00000613138 MYCLP12524 364 aaPredicted RBP14.65□□□□□ -0.06
CSTF1-208ENST00000613138 FGD1P98174 961 aa14.65□□□□□ -0.06
CSTF1-208ENST00000613138 UBE2SQ16763 222 aa14.65□□□□□ -0.06
CSTF1-208ENST00000613138 GNASQ5JWF2 1037 aa14.65□□□□□ -0.06
CSTF1-208ENST00000613138 ARHGEF16Q5VV41 709 aa14.65□□□□□ -0.06
CSTF1-208ENST00000613138 MCF2L2Q86YR7 1114 aa14.65□□□□□ -0.06
CSTF1-208ENST00000613138 DNERQ8NFT8 737 aa14.65□□□□□ -0.06
CSTF1-208ENST00000613138 NCOA5Q9HCD5 579 aaKnown RBP14.65□□□□□ -0.06
CSTF1-208ENST00000613138 RBM47A0AV96 593 aaKnown RBP14.64□□□□□ -0.07
CSTF1-208ENST00000613138 GCOM1H8Y6P7 765 aaPredicted RBP14.64□□□□□ -0.07
CSTF1-208ENST00000613138 RGS20O76081 388 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 POLR2MP0CAP2 368 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 CALM1P0DP23 149 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 CALM2P0DP24 149 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 CALM3P0DP25 149 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 GHRHRQ02643 423 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 LY6KQ17RY6 165 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 WWC2Q6AWC2 1192 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 IQSEC1Q6DN90 963 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 CXCL17Q6UXB2 119 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 NSUN6Q8TEA1 469 aaKnown RBP14.64□□□□□ -0.07
CSTF1-208ENST00000613138 BCAS3Q9H6U6 928 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 ZSWIM6Q9HCJ5 1215 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 NR2E3Q9Y5X4 410 aa14.64□□□□□ -0.07
CSTF1-208ENST00000613138 MEIS2O14770 477 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 NR3C2P08235 984 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 HMGB1P09429 215 aaKnown RBP14.63□□□□□ -0.07
CSTF1-208ENST00000613138 CST5P28325 142 aaPredicted RBP14.63□□□□□ -0.07
CSTF1-208ENST00000613138 GNAQP50148 359 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 PSMC6P62333 389 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 CCT2P78371 535 aaKnown RBP14.63□□□□□ -0.07
CSTF1-208ENST00000613138 TLE2Q04725 743 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 SNX17Q15036 470 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 PGM5Q15124 567 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 FSCN1Q16658 493 aaKnown RBP14.63□□□□□ -0.07
CSTF1-208ENST00000613138 DUSP28Q4G0W2 176 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 SYNE3Q6ZMZ3 975 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 RUFY3Q7L099 469 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 HEATR3Q7Z4Q2 680 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 LZTS2Q9BRK4 669 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 PDCD2LQ9BRP1 358 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 AGXT2Q9BYV1 514 aa14.63□□□□□ -0.07
CSTF1-208ENST00000613138 RBM27Q9P2N5 1060 aaKnown RBP14.63□□□□□ -0.07
CSTF1-208ENST00000613138 SEC63Q9UGP8 760 aaKnown RBP14.63□□□□□ -0.07
CSTF1-208ENST00000613138 V9GY48 417 aaPredicted RBP14.63□□□□□ -0.07
CSTF1-208ENST00000613138 TRIP12Q14669 1992 aaPredicted RBP14.62□□□□□ -0.07
CSTF1-208ENST00000613138 SCN10AQ9Y5Y9 1956 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 TRIM43BA6NCK2 446 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 PQBP1O60828 265 aaKnown RBP14.62□□□□□ -0.07
CSTF1-208ENST00000613138 TXNP10599 105 aaKnown RBP14.62□□□□□ -0.07
CSTF1-208ENST00000613138 ITGB8P26012 769 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 SMARCA1P28370 1054 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 MAGEA10P43363 369 aaPredicted RBP14.62□□□□□ -0.07
CSTF1-208ENST00000613138 METAP2P50579 478 aaKnown RBP eCLIP14.62□□□□□ -0.07
CSTF1-208ENST00000613138 MDM2Q00987 491 aaPredicted RBP14.62□□□□□ -0.07
CSTF1-208ENST00000613138 CCDC62Q6P9F0 684 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 OR6J1Q8NGC5 347 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 PHKBQ93100 1093 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 TRIM43Q96BQ3 446 aaPredicted RBP14.62□□□□□ -0.07
CSTF1-208ENST00000613138 PGBD1Q96JS3 809 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 PRDM5Q9NQX1 630 aaPredicted RBP14.62□□□□□ -0.07
CSTF1-208ENST00000613138 STARD7Q9NQZ5 370 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 TELO2Q9Y4R8 837 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 GRIN2DO15399 1336 aa14.62□□□□□ -0.07
CSTF1-208ENST00000613138 PSMA5P28066 241 aa14.61□□□□□ -0.07
CSTF1-208ENST00000613138 PDIA3P30101 505 aaKnown RBP14.61□□□□□ -0.07
CSTF1-208ENST00000613138 MRPS9P82933 396 aaKnown RBP14.61□□□□□ -0.07
CSTF1-208ENST00000613138 SP2Q02086 613 aa14.61□□□□□ -0.07
CSTF1-208ENST00000613138 STK3Q13188 491 aa14.61□□□□□ -0.07
CSTF1-208ENST00000613138 PPP2R5BQ15173 497 aa14.61□□□□□ -0.07
CSTF1-208ENST00000613138 STXBP2Q15833 593 aa14.61□□□□□ -0.07
CSTF1-208ENST00000613138 VTI1AQ96AJ9 217 aa14.61□□□□□ -0.07
CSTF1-208ENST00000613138 TSEN34Q9BSV6 310 aaKnown RBP14.61□□□□□ -0.07
CSTF1-208ENST00000613138 PRO3102Q9H379 93 aa14.61□□□□□ -0.07
CSTF1-208ENST00000613138 PDLIM7Q9NR12 457 aa14.61□□□□□ -0.07
CSTF1-208ENST00000613138 RBM28Q9NW13 759 aaKnown RBP14.61□□□□□ -0.07
CSTF1-208ENST00000613138 RTEL1Q9NZ71 1219 aa14.61□□□□□ -0.07
CSTF1-208ENST00000613138 LAMA3Q16787 3333 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms