RNA–Protein interactions for RNA: ENST00000611527.1

FGFR2-223, Transcript of fibroblast growth factor receptor 2, human

TSL 3 BASIC

Gene FGFR2, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-223	ENST00000611527	MRPL11	Q9Y3B7	192 aa	Known RBP	12.91	□□□□□ -0.34
FGFR2-223	ENST00000611527	PCDHA1	Q9Y5I3	950 aa		12.91	□□□□□ -0.34
FGFR2-223	ENST00000611527	CUL9	Q8IWT3	2517 aa		12.91	□□□□□ -0.34
FGFR2-223	ENST00000611527	DNAJC25-GNG10	A0A024R161	153 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	PTPDC1	A2A3K4	754 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	CD2BP2	O95400	341 aa	Known RBP	12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	IFNAR1	P17181	557 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	ST3GAL1	Q11201	340 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	SNX17	Q15036	470 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	WWC2	Q6AWC2	1192 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	LENG1	Q96BZ8	264 aa	Predicted RBP	12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	DDX11	Q96FC9	970 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	FGD4	Q96M96	766 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	TINF2	Q9BSI4	451 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	SLC26A6	Q9BXS9	759 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	PDLIM7	Q9NR12	457 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	CYP39A1	Q9NYL5	469 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	NRBP1	Q9UHY1	535 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	LIMCH1	Q9UPQ0	1083 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	STXBP5L	Q9Y2K9	1186 aa		12.9	□□□□□ -0.34
FGFR2-223	ENST00000611527	POTEB2	H3BUK9	544 aa		12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	OPLAH	O14841	1288 aa		12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	PGK1	P00558	417 aa		12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	RARB	P10826	455 aa		12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	CALML3	P27482	149 aa		12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	TRAF1	Q13077	416 aa		12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	BAAT	Q14032	418 aa	Predicted RBP	12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	CPLX2	Q6PUV4	134 aa	Known RBP	12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	RNF207	Q6ZRF8	634 aa		12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	FAM133A	Q8N9E0	248 aa		12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	RNF26	Q9BY78	433 aa	Predicted RBP	12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	PHF24	Q9UPV7	400 aa		12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	DIS3	Q9Y2L1	958 aa	Known RBP	12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527		V9GY48	417 aa	Predicted RBP	12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527		A0A0C4DFX4	3053 aa		12.89	□□□□□ -0.35
FGFR2-223	ENST00000611527	STXBP3	O00186	592 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	DTNB	O60941	627 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	CDKL5	O76039	1030 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	SCG2	P13521	617 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	RPS6	P62753	249 aa	Known RBP	12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	AKAP17A	Q02040	695 aa	Known RBP	12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	CNTN2	Q02246	1040 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	PFKFB3	Q16875	520 aa	Predicted RBP	12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	C9orf50	Q5SZB4	431 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	PPP1R18	Q6NYC8	613 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	SH3RF1	Q7Z6J0	888 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	TRIM22	Q8IYM9	498 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	BAD	Q92934	168 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	PURB	Q96QR8	312 aa	Known RBP	12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	CNPY2	Q9Y2B0	182 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	ASTN1	O14525	1302 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	STK36	Q9NRP7	1315 aa		12.88	□□□□□ -0.35
FGFR2-223	ENST00000611527	TRIM43B	A6NCK2	446 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	hCG_1984214	I3L0E3	225 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	DLL1	O00548	723 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	PRPF3	O43395	683 aa	Known RBP	12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	CTDNEP1	O95476	244 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	CFB	P00751	764 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	ZNF865	P0CJ78	1059 aa	Predicted RBP	12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	AKR1A1	P14550	325 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	HSD17B4	P51659	736 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	NAPA	P54920	295 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	TLE2	Q04725	743 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	SSRP1	Q08945	709 aa	Known RBP	12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	SHH	Q15465	462 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	PKN1	Q16512	942 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	C1orf53	Q5VUE5	145 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	TYW1B	Q6NUM6	668 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	RNF180	Q86T96	592 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	MCF2L2	Q86YR7	1114 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	CCDC83	Q8IWF9	413 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	ZNF713	Q8N859	430 aa	Predicted RBP	12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	NSUN7	Q8NE18	718 aa	Known RBP	12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	TBC1D5	Q92609	795 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	FAM161B	Q96MY7	647 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	GUCD1	Q96NT3	240 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	COL20A1	Q9P218	1284 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527	SYNRG	Q9UMZ2	1314 aa		12.87	□□□□□ -0.35
FGFR2-223	ENST00000611527		A0A1W2PQ45	241 aa	Predicted RBP	12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527		A0A1W2PQY0	241 aa		12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	SOWAHB	A6NEL2	793 aa		12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	JAK2	O60674	1132 aa		12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	ADAMTS4	O75173	837 aa		12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	HOXA13	P31271	388 aa	Predicted RBP	12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	GHRHR	Q02643	423 aa		12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	RGS22	Q8NE09	1264 aa		12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	IL27	Q8NEV9	243 aa		12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	ZSCAN31	Q96LW9	406 aa	Predicted RBP	12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	BARHL2	Q9NY43	387 aa		12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	DDX49	Q9Y6V7	483 aa	Known RBP	12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	SYNGAP1	Q96PV0	1343 aa		12.86	□□□□□ -0.35
FGFR2-223	ENST00000611527	UNC80	Q8N2C7	3258 aa		12.85	□□□□□ -0.35
FGFR2-223	ENST00000611527	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.85	□□□□□ -0.35
FGFR2-223	ENST00000611527	PQBP1	O60828	265 aa	Known RBP	12.85	□□□□□ -0.35
FGFR2-223	ENST00000611527	DEXI	O95424	95 aa		12.85	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms