RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 FBXO11Q86XK2 927 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 MCF2L2Q86YR7 1114 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 TTYH1Q9H313 450 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-207ENST00000611426 JMJD4Q9H9V9 463 aa25.31■■□□□ 1.64
CBWD3-207ENST00000611426 U3KPZ7 1027 aaPredicted RBP25.31■■□□□ 1.64
CBWD3-207ENST00000611426 B4GALT4O60513 344 aa25.3■■□□□ 1.64
CBWD3-207ENST00000611426 ACRP10323 421 aa25.3■■□□□ 1.64
CBWD3-207ENST00000611426 PURAQ00577 322 aaKnown RBP25.3■■□□□ 1.64
CBWD3-207ENST00000611426 CYB5R4Q7L1T6 521 aa25.3■■□□□ 1.64
CBWD3-207ENST00000611426 MRPL11Q9Y3B7 192 aaKnown RBP25.3■■□□□ 1.64
CBWD3-207ENST00000611426 TXNP10599 105 aaKnown RBP25.29■■□□□ 1.64
CBWD3-207ENST00000611426 PTH1RQ03431 593 aa25.29■■□□□ 1.64
CBWD3-207ENST00000611426 SEC23AQ15436 765 aa25.29■■□□□ 1.64
CBWD3-207ENST00000611426 PSRC1Q6PGN9 363 aaPredicted RBP25.29■■□□□ 1.64
CBWD3-207ENST00000611426 ZNF365Q70YC5 407 aa25.29■■□□□ 1.64
CBWD3-207ENST00000611426 STAG2Q8N3U4 1231 aa25.29■■□□□ 1.64
CBWD3-207ENST00000611426 SYTL5Q8TDW5 730 aaPredicted RBP25.29■■□□□ 1.64
CBWD3-207ENST00000611426 TAAR1Q96RJ0 339 aa25.29■■□□□ 1.64
CBWD3-207ENST00000611426 MTG1Q9BT17 334 aaPredicted RBP25.29■■□□□ 1.64
CBWD3-207ENST00000611426 MYH6P13533 1939 aa25.29■■□□□ 1.64
CBWD3-207ENST00000611426 CDH23Q9H251 3354 aa25.28■■□□□ 1.64
CBWD3-207ENST00000611426 DLL1O00548 723 aa25.28■■□□□ 1.64
CBWD3-207ENST00000611426 TTLL4Q14679 1199 aa25.28■■□□□ 1.64
CBWD3-207ENST00000611426 NSUN6Q8TEA1 469 aaKnown RBP25.28■■□□□ 1.64
CBWD3-207ENST00000611426 COPS5Q92905 334 aa25.28■■□□□ 1.64
CBWD3-207ENST00000611426 ALDH8A1Q9H2A2 487 aaPredicted RBP25.28■■□□□ 1.64
CBWD3-207ENST00000611426 IL23AQ9NPF7 189 aa25.28■■□□□ 1.64
CBWD3-207ENST00000611426 UMODL1Q5DID0 1318 aa25.27■■□□□ 1.64
CBWD3-207ENST00000611426 TMEM265A0A087WTH1 108 aa25.27■■□□□ 1.64
CBWD3-207ENST00000611426 KLRF2D3W0D1 207 aa25.27■■□□□ 1.64
CBWD3-207ENST00000611426 CYP21A2P08686 494 aa25.27■■□□□ 1.64
CBWD3-207ENST00000611426 RBM25P49756 843 aaKnown RBP25.27■■□□□ 1.64
CBWD3-207ENST00000611426 NOC4LQ9BVI4 516 aaKnown RBP25.27■■□□□ 1.64
CBWD3-207ENST00000611426 AMNQ9BXJ7 453 aa25.27■■□□□ 1.64
CBWD3-207ENST00000611426 COL20A1Q9P218 1284 aa25.27■■□□□ 1.64
CBWD3-207ENST00000611426 EPB41L2O43491 1005 aaKnown RBP25.26■■□□□ 1.63
CBWD3-207ENST00000611426 KPNA6O60684 536 aa25.26■■□□□ 1.63
CBWD3-207ENST00000611426 DNAJB2P25686 324 aa25.26■■□□□ 1.63
CBWD3-207ENST00000611426 CCL23P55773 120 aa25.26■■□□□ 1.63
CBWD3-207ENST00000611426 IWS1Q96ST2 819 aa25.26■■□□□ 1.63
CBWD3-207ENST00000611426 RMDN3Q96TC7 470 aa25.26■■□□□ 1.63
CBWD3-207ENST00000611426 MAD2L2Q9UI95 211 aa25.26■■□□□ 1.63
CBWD3-207ENST00000611426 UNC80Q8N2C7 3258 aa25.26■■□□□ 1.63
CBWD3-207ENST00000611426 A6NJR5 290 aa25.25■■□□□ 1.63
CBWD3-207ENST00000611426 SUPT20HL2P0C7V6 817 aa25.25■■□□□ 1.63
CBWD3-207ENST00000611426 STXBP2Q15833 593 aa25.25■■□□□ 1.63
CBWD3-207ENST00000611426 RASIP1Q5U651 963 aa25.25■■□□□ 1.63
CBWD3-207ENST00000611426 SEPT14Q6ZU15 432 aa25.25■■□□□ 1.63
CBWD3-207ENST00000611426 MYLIPQ8WY64 445 aa25.25■■□□□ 1.63
CBWD3-207ENST00000611426 TRMT13Q9NUP7 481 aaKnown RBP25.25■■□□□ 1.63
CBWD3-207ENST00000611426 ERICH2A1L162 156 aa25.24■■□□□ 1.63
CBWD3-207ENST00000611426 IFIT3O14879 490 aaKnown RBP25.24■■□□□ 1.63
CBWD3-207ENST00000611426 ARIH2O95376 493 aa25.24■■□□□ 1.63
CBWD3-207ENST00000611426 CFBP00751 764 aa25.24■■□□□ 1.63
CBWD3-207ENST00000611426 FGBP02675 491 aa25.24■■□□□ 1.63
CBWD3-207ENST00000611426 ARHGEF16Q5VV41 709 aa25.24■■□□□ 1.63
CBWD3-207ENST00000611426 RALYLQ86SE5 291 aaKnown RBP25.24■■□□□ 1.63
CBWD3-207ENST00000611426 C22orf23Q9BZE7 217 aa25.24■■□□□ 1.63
CBWD3-207ENST00000611426 PALM3A6NDB9 673 aaPredicted RBP25.23■■□□□ 1.63
CBWD3-207ENST00000611426 SGSM2O43147 1006 aa25.23■■□□□ 1.63
CBWD3-207ENST00000611426 NBPF20Q3BBV1 942 aa25.23■■□□□ 1.63
CBWD3-207ENST00000611426 FAM47CQ5HY64 1035 aa25.23■■□□□ 1.63
CBWD3-207ENST00000611426 CCDC62Q6P9F0 684 aa25.23■■□□□ 1.63
CBWD3-207ENST00000611426 NCOA7Q8NI08 942 aa25.23■■□□□ 1.63
CBWD3-207ENST00000611426 HERVK_113Q902F9 699 aa25.23■■□□□ 1.63
CBWD3-207ENST00000611426 MTIF3Q9H2K0 278 aaKnown RBP25.23■■□□□ 1.63
CBWD3-207ENST00000611426 GRXCR1A8MXD5 290 aa25.22■■□□□ 1.63
CBWD3-207ENST00000611426 E7EWF7 191 aa25.22■■□□□ 1.63
CBWD3-207ENST00000611426 ZBTB5O15062 677 aa25.22■■□□□ 1.63
CBWD3-207ENST00000611426 REC8O95072 547 aa25.22■■□□□ 1.63
CBWD3-207ENST00000611426 EIF2AK2P19525 551 aaKnown RBP25.22■■□□□ 1.63
CBWD3-207ENST00000611426 LY6KQ17RY6 165 aa25.22■■□□□ 1.63
CBWD3-207ENST00000611426 RPUSD2Q8IZ73 545 aaKnown RBP25.22■■□□□ 1.63
CBWD3-207ENST00000611426 TIFAQ96CG3 184 aa25.22■■□□□ 1.63
CBWD3-207ENST00000611426 MTMR8Q96EF0 704 aa25.22■■□□□ 1.63
CBWD3-207ENST00000611426 ESYT1Q9BSJ8 1104 aa25.22■■□□□ 1.63
CBWD3-207ENST00000611426 WNT8AQ9H1J5 351 aa25.22■■□□□ 1.63
CBWD3-207ENST00000611426 EYSQ5T1H1 3165 aa25.21■■□□□ 1.63
CBWD3-207ENST00000611426 CYP2C9P11712 490 aa25.21■■□□□ 1.63
CBWD3-207ENST00000611426 FOSL2P15408 326 aa25.21■■□□□ 1.63
CBWD3-207ENST00000611426 GRM4Q14833 912 aa25.21■■□□□ 1.63
CBWD3-207ENST00000611426 WTAPQ15007 396 aa25.21■■□□□ 1.63
CBWD3-207ENST00000611426 SART3Q15020 963 aaKnown RBP25.21■■□□□ 1.63
CBWD3-207ENST00000611426 NFRKBQ6P4R8 1299 aa25.21■■□□□ 1.63
CBWD3-207ENST00000611426 IPO9Q96P70 1041 aaKnown RBP25.21■■□□□ 1.63
CBWD3-207ENST00000611426 ZNF576Q9H609 170 aa25.21■■□□□ 1.63
CBWD3-207ENST00000611426 PCDHA1Q9Y5I3 950 aa25.21■■□□□ 1.63
CBWD3-207ENST00000611426 PPP1R11O60927 126 aaPredicted RBP25.2■■□□□ 1.63
CBWD3-207ENST00000611426 EIF3JO75822 258 aaKnown RBP25.2■■□□□ 1.63
CBWD3-207ENST00000611426 GH1P01241 217 aa25.2■■□□□ 1.63
CBWD3-207ENST00000611426 GRIN2CQ14957 1233 aa25.2■■□□□ 1.63
CBWD3-207ENST00000611426 CHST3Q7LGC8 479 aa25.2■■□□□ 1.63
CBWD3-207ENST00000611426 OTOP2Q7RTS6 562 aa25.2■■□□□ 1.63
CBWD3-207ENST00000611426 HOMER1Q86YM7 354 aa25.2■■□□□ 1.63
CBWD3-207ENST00000611426 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.2■■□□□ 1.63
CBWD3-207ENST00000611426 MAFAQ8NHW3 353 aaPredicted RBP25.2■■□□□ 1.63
CBWD3-207ENST00000611426 PPP1R13LQ8WUF5 828 aa25.2■■□□□ 1.63
CBWD3-207ENST00000611426 AFG1LQ8WV93 481 aa25.2■■□□□ 1.63
CBWD3-207ENST00000611426 SCLYQ96I15 445 aa25.2■■□□□ 1.63
CBWD3-207ENST00000611426 PBX4Q9BYU1 374 aa25.2■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms