RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CABS1Q96KC9 395 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 SDF4Q9BRK5 362 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 TMOD2Q9NZR1 351 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 PPP2R2CQ9Y2T4 447 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 FRMD3A2A2Y4 597 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 PFKFB1P16118 471 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 FAM160A1Q05DH4 1040 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 CIAPIN1Q6FI81 312 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 SPICE1Q8N0Z3 855 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 ENGASEQ8NFI3 743 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 COA7Q96BR5 231 aa17.83■□□□□ 0.44
RTN1-209ENST00000611068 DHX36Q9H2U1 1008 aaKnown RBP17.83■□□□□ 0.44
RTN1-209ENST00000611068 VSNL1P62760 191 aa17.82■□□□□ 0.44
RTN1-209ENST00000611068 USP49Q70CQ1 688 aa17.82■□□□□ 0.44
RTN1-209ENST00000611068 PDILTQ8N807 584 aa17.82■□□□□ 0.44
RTN1-209ENST00000611068 PLCD4Q9BRC7 762 aa17.82■□□□□ 0.44
RTN1-209ENST00000611068 TACO1Q9BSH4 297 aaKnown RBP17.82■□□□□ 0.44
RTN1-209ENST00000611068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.82■□□□□ 0.44
RTN1-209ENST00000611068 RAB21Q9UL25 225 aa17.82■□□□□ 0.44
RTN1-209ENST00000611068 FOCADQ5VW36 1801 aa17.82■□□□□ 0.44
RTN1-209ENST00000611068 EME2A4GXA9 379 aaPredicted RBP17.82■□□□□ 0.44
RTN1-209ENST00000611068 MCM7P33993 719 aa17.82■□□□□ 0.44
RTN1-209ENST00000611068 NF2P35240 595 aa17.82■□□□□ 0.44
RTN1-209ENST00000611068 KIRREL3Q8IZU9 778 aa17.82■□□□□ 0.44
RTN1-209ENST00000611068 FMR1NBQ8N0W7 255 aaPredicted RBP17.82■□□□□ 0.44
RTN1-209ENST00000611068 MSL3Q8N5Y2 521 aaKnown RBP17.82■□□□□ 0.44
RTN1-209ENST00000611068 IGKV6D-41A0A0C4DH26 115 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 BIN1O00499 593 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 TFRCP02786 760 aaKnown RBP17.81■□□□□ 0.44
RTN1-209ENST00000611068 IRX1P78414 480 aaPredicted RBP17.81■□□□□ 0.44
RTN1-209ENST00000611068 EBAG9O00559 213 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 WNT10BO00744 389 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 SYF2O95926 243 aaKnown RBP17.81■□□□□ 0.44
RTN1-209ENST00000611068 RHOXF2BP0C7M4 288 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 TAL1P17542 331 aaPredicted RBP17.81■□□□□ 0.44
RTN1-209ENST00000611068 GNAQP50148 359 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 NAPAP54920 295 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 ZYXQ15942 572 aaKnown RBP17.81■□□□□ 0.44
RTN1-209ENST00000611068 ABCB5Q2M3G0 1257 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 TBC1D10BQ4KMP7 808 aaPredicted RBP17.81■□□□□ 0.44
RTN1-209ENST00000611068 RILPL1Q5EBL4 403 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 RHOXF2Q9BQY4 288 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 ODF2LQ9ULJ1 636 aa17.81■□□□□ 0.44
RTN1-209ENST00000611068 ZNF202O95125 648 aa17.8■□□□□ 0.44
RTN1-209ENST00000611068 DPCR1Q3MIW9 517 aa17.8■□□□□ 0.44
RTN1-209ENST00000611068 SOGA3Q5TF21 947 aa17.8■□□□□ 0.44
RTN1-209ENST00000611068 SIAH1Q8IUQ4 282 aa17.8■□□□□ 0.44
RTN1-209ENST00000611068 IRX2Q9BZI1 471 aaPredicted RBP17.8■□□□□ 0.44
RTN1-209ENST00000611068 TRIM6Q9C030 488 aaPredicted RBP17.8■□□□□ 0.44
RTN1-209ENST00000611068 ZNF646O15015 1829 aaPredicted RBP17.8■□□□□ 0.44
RTN1-209ENST00000611068 STXBP3O00186 592 aa17.8■□□□□ 0.44
RTN1-209ENST00000611068 SKAP2O75563 359 aaPredicted RBP17.8■□□□□ 0.44
RTN1-209ENST00000611068 PRPF6O94906 941 aaKnown RBP17.8■□□□□ 0.44
RTN1-209ENST00000611068 PREPLQ4J6C6 727 aaPredicted RBP17.8■□□□□ 0.44
RTN1-209ENST00000611068 PRAMEF18Q5VWM3 479 aa17.8■□□□□ 0.44
RTN1-209ENST00000611068 BLIDQ8IZY5 108 aa17.8■□□□□ 0.44
RTN1-209ENST00000611068 RIN2Q8WYP3 895 aaPredicted RBP17.8■□□□□ 0.44
RTN1-209ENST00000611068 RRP36Q96EU6 259 aaKnown RBP17.8■□□□□ 0.44
RTN1-209ENST00000611068 FNTAP49354 379 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 ICA1Q05084 483 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 TNFRSF25Q93038 417 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 TATDN2Q93075 761 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 MYOZ2Q9NPC6 264 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
RTN1-209ENST00000611068 MYH8P13535 1937 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 TRIM75PA6NK02 468 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 USP17L10C9JJH3 530 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 CTAGE5O15320 804 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 CUTAO60888 179 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 ERLIN1O75477 346 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 RDXP35241 583 aaKnown RBP17.79■□□□□ 0.44
RTN1-209ENST00000611068 ECE1P42892 770 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 ARHGAP27Q6ZUM4 889 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 SRGAP1Q7Z6B7 1085 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 MSANTD4Q8NCY6 345 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 BIN2Q9UBW5 565 aaPredicted RBP17.79■□□□□ 0.44
RTN1-209ENST00000611068 FZD1Q9UP38 647 aa17.79■□□□□ 0.44
RTN1-209ENST00000611068 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.79■□□□□ 0.44
RTN1-209ENST00000611068 MYO3BQ8WXR4 1341 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 ANKRD33BA6NCL7 494 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 ZSCAN12O43309 604 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 RTN2O75298 545 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 ATP1A3P13637 1013 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 SSR1P43307 286 aaKnown RBP17.78■□□□□ 0.44
RTN1-209ENST00000611068 GMPSP49915 693 aaPredicted RBP17.78■□□□□ 0.44
RTN1-209ENST00000611068 INF2Q27J81 1249 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 FOXP4Q8IVH2 680 aaPredicted RBP17.78■□□□□ 0.44
RTN1-209ENST00000611068 ADGRF4Q8IZF3 695 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 IGSF22Q8N9C0 903 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 KRI1Q8N9T8 703 aaKnown RBP17.78■□□□□ 0.44
RTN1-209ENST00000611068 ZNF483Q8TF39 744 aaPredicted RBP17.78■□□□□ 0.44
RTN1-209ENST00000611068 CCDC12Q8WUD4 166 aaPredicted RBP17.78■□□□□ 0.44
RTN1-209ENST00000611068 UIMC1Q96RL1 719 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 TMEM260Q9NX78 707 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 BARHL2Q9NY43 387 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 SMCO2A6NFE2 343 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 FOXN1O15353 648 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 ERCC3P19447 782 aa17.78■□□□□ 0.44
RTN1-209ENST00000611068 CMA1P23946 247 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms