RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 PHF12Q96QT6 1004 aa11.12□□□□□ -0.63
CTCFL-220ENST00000608858 RIF1Q5UIP0 2472 aaKnown RBP11.12□□□□□ -0.63
CTCFL-220ENST00000608858 MYH8P13535 1937 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 NAV1Q8NEY1 1877 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 ABHD14A-ACY1A0A1B0GW23 586 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 MED19A0JLT2 244 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-220ENST00000608858 TMEM232C9JQI7 657 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 H3BNC9 293 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 GOLIM4O00461 696 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 KDM4AO75164 1064 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 MBD4O95243 580 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 SELPP16109 830 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 CPT1AP50416 773 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 SLFN5Q08AF3 891 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 HYAL1Q12794 435 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 IKQ13123 557 aaPredicted RBP11.11□□□□□ -0.63
CTCFL-220ENST00000608858 NFRKBQ6P4R8 1299 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 NSMFQ6X4W1 530 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 C16orf86Q6ZW13 317 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 LRRC8DQ7L1W4 858 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 FSD1Q9BTV5 496 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 NSUN3Q9H649 340 aaKnown RBP11.11□□□□□ -0.63
CTCFL-220ENST00000608858 C1orf115Q9H7X2 142 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 FEM1BQ9UK73 627 aa11.11□□□□□ -0.63
CTCFL-220ENST00000608858 BAZ2AQ9UIF9 1905 aaKnown RBP11.11□□□□□ -0.63
CTCFL-220ENST00000608858 DCHS1Q96JQ0 3298 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 SIP14410 1827 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 TCRBV5S4A2TA0A5A2 114 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 IGSF3O75054 1194 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 PDGFBP01127 241 aaPredicted RBP11.1□□□□□ -0.63
CTCFL-220ENST00000608858 CKBP12277 381 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 TIGD5Q53EQ6 642 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 CTR9Q6PD62 1173 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 TMEM192Q8IY95 271 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 LRRC47Q8N1G4 583 aaKnown RBP11.1□□□□□ -0.63
CTCFL-220ENST00000608858 DHX38Q92620 1227 aaKnown RBP11.1□□□□□ -0.63
CTCFL-220ENST00000608858 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 CTAGE1Q96RT6 745 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 DNAJC2Q99543 621 aaKnown RBP11.1□□□□□ -0.63
CTCFL-220ENST00000608858 POP1Q99575 1024 aaKnown RBP11.1□□□□□ -0.63
CTCFL-220ENST00000608858 MKNK2Q9HBH9 465 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 CYP39A1Q9NYL5 469 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 WDR87Q6ZQQ6 2873 aa11.1□□□□□ -0.63
CTCFL-220ENST00000608858 PRR23AA6NEV1 266 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 ZNF200P98182 395 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-220ENST00000608858 ATP8B2P98198 1209 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 BAATQ14032 418 aaPredicted RBP11.09□□□□□ -0.63
CTCFL-220ENST00000608858 PKN1Q16512 942 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 LRRFIP1Q32MZ4 808 aaKnown RBP11.09□□□□□ -0.63
CTCFL-220ENST00000608858 SLFN13Q68D06 897 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.09□□□□□ -0.63
CTCFL-220ENST00000608858 AACSQ86V21 672 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 AMOTL1Q8IY63 956 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 ADSSL1Q8N142 457 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 AFAP1L1Q8TED9 768 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 RPGRIP1Q96KN7 1286 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 VTA1Q9NP79 307 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 ATP8A2Q9NTI2 1148 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 NYAP2Q9P242 653 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 SLC4A4Q9Y6R1 1079 aa11.09□□□□□ -0.63
CTCFL-220ENST00000608858 MINDY4BA8MYZ0 360 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 GRM6O15303 877 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 PRDM1O75626 825 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 CXCL10P02778 98 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 BMP3P12645 472 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 CTC1Q2NKJ3 1217 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 BRDTQ58F21 947 aaPredicted RBP11.08□□□□□ -0.64
CTCFL-220ENST00000608858 ZNF618Q5T7W0 954 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 CHST3Q7LGC8 479 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 FRMD5Q7Z6J6 570 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 CCDC155Q8N6L0 562 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 DBF4BQ8NFT6 615 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 YME1L1Q96TA2 773 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 ALG1Q9BT22 464 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 IRF2BPLQ9H1B7 796 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 INCENPQ9NQS7 918 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 CD207Q9UJ71 328 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 PLXNA3P51805 1871 aa11.08□□□□□ -0.64
CTCFL-220ENST00000608858 CACNA1BQ00975 2339 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 GALR2O43603 387 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-220ENST00000608858 TBX10O75333 385 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 LGR5O75473 907 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 AMHP03971 560 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 TXNP10599 105 aaKnown RBP11.07□□□□□ -0.64
CTCFL-220ENST00000608858 RASA1P20936 1047 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 MCCP23508 829 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 OAZ1P54368 228 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 PTPN11Q06124 597 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-220ENST00000608858 PDE4BQ07343 736 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 MBTPS1Q14703 1052 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 COL19A1Q14993 1142 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 CAGE1Q8TC20 777 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 FRAT1Q92837 279 aaPredicted RBP11.07□□□□□ -0.64
CTCFL-220ENST00000608858 WNT8BQ93098 351 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 ASIC4Q96FT7 647 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 CNTNAP3BQ96NU0 1288 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 CNTNAP3Q9BZ76 1288 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 OSBPL7Q9BZF2 842 aa11.07□□□□□ -0.64
CTCFL-220ENST00000608858 IL1RAPL2Q9NP60 686 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms