RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 MRPL11Q9Y3B7 192 aaKnown RBP12.4□□□□□ -0.42
TUBE1-210ENST00000604967 SNX14Q9Y5W7 946 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 LOC102724159A0A0B4J2E5 919 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 ERICH2A1L162 156 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 MOXD2PA6NHM9 499 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 KIAA0355O15063 1070 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 ADAMTS3O15072 1205 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 HSPA4P34932 840 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 PDE4DQ08499 809 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 PWP2Q15269 919 aaKnown RBP12.39□□□□□ -0.43
TUBE1-210ENST00000604967 C9orf50Q5SZB4 431 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 TYW1BQ6NUM6 668 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 APOA5Q6Q788 366 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
TUBE1-210ENST00000604967 BADQ92934 168 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 VWCEQ96DN2 955 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 TMEM87BQ96K49 555 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 RMDN3Q96TC7 470 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 PRDM5Q9NQX1 630 aaPredicted RBP12.39□□□□□ -0.43
TUBE1-210ENST00000604967 STARD7Q9NQZ5 370 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 PXMP2Q9NR77 195 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 PNMA2Q9UL42 364 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 TELO2Q9Y4R8 837 aa12.39□□□□□ -0.43
TUBE1-210ENST00000604967 ELP1O95163 1332 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 UMODL1Q5DID0 1318 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 MEIS2O14770 477 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 CD4P01730 458 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 CLTBP09497 229 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 PURAQ00577 322 aaKnown RBP12.38□□□□□ -0.43
TUBE1-210ENST00000604967 SP2Q02086 613 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 ARHGAP1Q07960 439 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 SART3Q15020 963 aaKnown RBP12.38□□□□□ -0.43
TUBE1-210ENST00000604967 LY6KQ17RY6 165 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 USP17L6PQ6QN14 398 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 CASC1Q6TDU7 716 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 SEPT14Q6ZU15 432 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 C16orf59Q7L2K0 433 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 FAM126BQ8IXS8 530 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 CCDC82Q8N4S0 544 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 PPP4R2Q9NY27 417 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 Q9Y3F1 56 aa12.38□□□□□ -0.43
TUBE1-210ENST00000604967 ARVCFO00192 962 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 NR3C2P08235 984 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 CDC27P30260 824 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 MRPS9P82933 396 aaKnown RBP12.37□□□□□ -0.43
TUBE1-210ENST00000604967 SEMA3FQ13275 785 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 PGM5Q15124 567 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 SHHQ15465 462 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 DHX32Q7L7V1 743 aaKnown RBP12.37□□□□□ -0.43
TUBE1-210ENST00000604967 MICU3Q86XE3 530 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 FANCBQ8NB91 859 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 PCSK9Q8NBP7 692 aaKnown RBP12.37□□□□□ -0.43
TUBE1-210ENST00000604967 NSUN6Q8TEA1 469 aaKnown RBP12.37□□□□□ -0.43
TUBE1-210ENST00000604967 TOX2Q96NM4 488 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 PDCD2LQ9BRP1 358 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 UBE2OQ9C0C9 1292 aaKnown RBP12.37□□□□□ -0.43
TUBE1-210ENST00000604967 MAF1Q9H063 256 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 TRPV6Q9H1D0 765 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 DDX41Q9UJV9 622 aaKnown RBP12.37□□□□□ -0.43
TUBE1-210ENST00000604967 FRMPD4Q14CM0 1322 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
TUBE1-210ENST00000604967 A0A0U1RQG5 324 aaPredicted RBP12.36□□□□□ -0.43
TUBE1-210ENST00000604967 A0A1W2PPC1 479 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 CCDC69A6NI79 296 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 A6NJR5 290 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 TXNP10599 105 aaKnown RBP12.36□□□□□ -0.43
TUBE1-210ENST00000604967 SMARCA1P28370 1054 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 ARHGEF16Q5VV41 709 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 VSIG10LQ86VR7 867 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 MCF2L2Q86YR7 1114 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 TDHQ8IZJ6 230 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 OR6J1Q8NGC5 347 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 CTCFLQ8NI51 663 aaPredicted RBP12.36□□□□□ -0.43
TUBE1-210ENST00000604967 SCFD2Q8WU76 684 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 AFG1LQ8WV93 481 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 KAT2BQ92831 832 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 GLT1D1Q96MS3 346 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 CTAGE1Q96RT6 745 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 KIAA1217Q5T5P2 1943 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 SCN10AQ9Y5Y9 1956 aa12.36□□□□□ -0.43
TUBE1-210ENST00000604967 SORBS3O60504 671 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 B4GALT4O60513 344 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 APOBRQ0VD83 1088 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 ITGA7Q13683 1181 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 HIC1Q14526 733 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 PPP2R5BQ15173 497 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 LRIT3Q3SXY7 679 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
TUBE1-210ENST00000604967 IWS1Q96ST2 819 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 USP26Q9BXU7 913 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 SPC25Q9HBM1 224 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 TRMT13Q9NUP7 481 aaKnown RBP12.35□□□□□ -0.43
TUBE1-210ENST00000604967 TMEM39AQ9NV64 488 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 SLC12A7Q9Y666 1083 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms