RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 UBXN1Q04323 297 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 KRT31Q15323 416 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 CCDC13Q8IYE1 715 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 STK11IPQ8N1F8 1099 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 PAGR1Q9BTK6 254 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 SLC26A6Q9BXS9 759 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 TSGA10Q9BZW7 698 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 TAB2Q9NYJ8 693 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 MARF1Q9Y4F3 1742 aaKnown RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 STK36Q9NRP7 1315 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 SETD1BQ9UPS6 1966 aaKnown RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 CCDC189A1A4V9 331 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 H3BM21 787 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 NR1D1P20393 614 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 VAV2P52735 878 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 MRPL12P52815 198 aaKnown RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 ANTXR2P58335 489 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 ERVK-9P63128 1117 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 FKBP4Q02790 459 aaKnown RBP eCLIP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 IFFO1Q0D2I5 559 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 CUL4BQ13620 913 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 NAA25Q14CX7 972 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 ZKSCAN8Q15776 578 aaPredicted RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 TTMPQ5BVD1 217 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 CFAP58Q5T655 872 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 KCTD16Q68DU8 428 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 C8orf74Q6P047 294 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 KDM7AQ6ZMT4 941 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 TRIM22Q8IYM9 498 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 OR8K1Q8NGG5 319 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 RSRC1Q96IZ7 334 aaKnown RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 CCDC85AQ96PX6 553 aaPredicted RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 MED15Q96RN5 788 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 METTL22Q9BUU2 404 aaPredicted RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 SLC40A1Q9NP59 571 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 RAB6BQ9NRW1 208 aa7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 LIMA1Q9UHB6 759 aaKnown RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 LUC7L2Q9Y383 392 aaKnown RBP7.17□□□□□ -1.26
SRGAP2-211ENST00000604423 UBN2Q6ZU65 1347 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 C5P01031 1676 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 KIF1AQ12756 1690 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 LAMB4A4D0S4 1761 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 ARFGEF2Q9Y6D5 1785 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 KCNJ18B7U540 433 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 E7EVH7 732 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 ZNF185O15231 689 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 RNMTO43148 476 aaKnown RBP7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 FGAP02671 866 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 MMP1P03956 469 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 SSBP05455 408 aaKnown RBP eCLIP7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 CDC25AP30304 524 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 RFX5P48382 616 aaPredicted RBP7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 GRIN1Q05586 938 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 KIF5AQ12840 1032 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 IFT88Q13099 833 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 PAK1Q13153 545 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 KCNJ12Q14500 433 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 TTF1Q15361 905 aaPredicted RBP7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 WLSQ5T9L3 541 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 APOA5Q6Q788 366 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 NLRP14Q86W24 1093 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 DIS3L2Q8IYB7 885 aaKnown RBP7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 SMYD4Q8IYR2 804 aaPredicted RBP7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 MMGT1Q8N4V1 131 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 SPATA20Q8TB22 786 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 RNF217Q8TC41 542 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 IRF7Q92985 503 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 CAVIN3Q969G5 261 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 ALS2CR12Q96Q35 445 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 GSDMAQ96QA5 445 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 CHP1Q99653 195 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 CSRNP2Q9H175 543 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 STIM2Q9P246 746 aa7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 SRPRBQ9Y5M8 271 aaKnown RBP7.16□□□□□ -1.26
SRGAP2-211ENST00000604423 SIPA1L3O60292 1781 aaPredicted RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 RGPD2P0DJD1 1756 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 MST1RQ04912 1400 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 MACROD2A1Z1Q3 448 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 ANKRD18BA2A2Z9 1011 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 PRAMEF22A3QJZ6 481 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 SH2B2O14492 632 aaPredicted RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 USO1O60763 962 aaKnown RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 TACC1O75410 805 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 PAX7P23759 505 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 GMPRP36959 345 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 PAFAH1B1P43034 410 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 MATR3P43243 847 aaKnown RBP eCLIP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 MCCD1P59942 119 aaPredicted RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 HERVK_113P62684 666 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 HDLBPQ00341 1268 aaKnown RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 PTGISQ16647 500 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 AMOTQ4VCS5 1084 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 TCP11X2Q5H9J9 407 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 RRAGBQ5VZM2 374 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 CYB5D1Q6P9G0 228 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 PRICKLE2Q7Z3G6 844 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 EGFL6Q8IUX8 553 aa7.15□□□□□ -1.26
SRGAP2-211ENST00000604423 SH2D3CQ8N5H7 860 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms