RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 V9GY48 417 aaPredicted RBP14.77□□□□□ -0.05
USE1-209ENST00000601592 DUSP11O75319 330 aaKnown RBP14.76□□□□□ -0.05
USE1-209ENST00000601592 MYCLP12524 364 aaPredicted RBP14.76□□□□□ -0.05
USE1-209ENST00000601592 STK3Q13188 491 aa14.76□□□□□ -0.05
USE1-209ENST00000601592 PPP2R5BQ15173 497 aa14.76□□□□□ -0.05
USE1-209ENST00000601592 SMARCC2Q8TAQ2 1214 aa14.76□□□□□ -0.05
USE1-209ENST00000601592 MORC4Q8TE76 937 aa14.76□□□□□ -0.05
USE1-209ENST00000601592 FERMT2Q96AC1 680 aa14.76□□□□□ -0.05
USE1-209ENST00000601592 NCOA5Q9HCD5 579 aaKnown RBP14.76□□□□□ -0.05
USE1-209ENST00000601592 PXMP2Q9NR77 195 aa14.76□□□□□ -0.05
USE1-209ENST00000601592 MAP3K20Q9NYL2 800 aaKnown RBP14.76□□□□□ -0.05
USE1-209ENST00000601592 NID2Q14112 1375 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 PPFIA3O75145 1194 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 EDNRBP24530 442 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 PDIA3P30101 505 aaKnown RBP14.75□□□□□ -0.05
USE1-209ENST00000601592 ATN1P54259 1190 aaPredicted RBP14.75□□□□□ -0.05
USE1-209ENST00000601592 NAPAP54920 295 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 AKAP17AQ02040 695 aaKnown RBP14.75□□□□□ -0.05
USE1-209ENST00000601592 STXBP2Q15833 593 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 WWC2Q6AWC2 1192 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 TAPT1Q6NXT6 567 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 SEPT14Q6ZU15 432 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 TLK2Q86UE8 772 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 SAMD3Q8N6K7 520 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 IWS1Q96ST2 819 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 WDR11Q9BZH6 1224 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 AP5M1Q9H0R1 490 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 DOCK5Q9H7D0 1870 aa14.75□□□□□ -0.05
USE1-209ENST00000601592 MYADML2A6NDP7 307 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 CPLX1O14810 134 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 DYNC1LI2O43237 492 aaPredicted RBP14.74□□□□□ -0.05
USE1-209ENST00000601592 EVI5O60447 810 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 ADAMTS4O75173 837 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 NR3C2P08235 984 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 SMPD1P17405 629 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 PTGS1P23219 599 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 IRX5P78411 483 aaPredicted RBP14.74□□□□□ -0.05
USE1-209ENST00000601592 GHRHRQ02643 423 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 FUT2Q10981 343 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 IQSEC1Q6DN90 963 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 USP17L6PQ6QN14 398 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 SCFD2Q8WU76 684 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 PHKBQ93100 1093 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 PDCD2LQ9BRP1 358 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 SLC26A6Q9BXS9 759 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 PSTPIP2Q9H939 334 aa14.74□□□□□ -0.05
USE1-209ENST00000601592 COL6A1P12109 1028 aa14.73□□□□□ -0.05
USE1-209ENST00000601592 CCND2P30279 289 aa14.73□□□□□ -0.05
USE1-209ENST00000601592 NEK4P51957 841 aa14.73□□□□□ -0.05
USE1-209ENST00000601592 BEX3Q00994 111 aa14.73□□□□□ -0.05
USE1-209ENST00000601592 UBE2SQ16763 222 aa14.73□□□□□ -0.05
USE1-209ENST00000601592 GNASQ5JWF2 1037 aa14.73□□□□□ -0.05
USE1-209ENST00000601592 TMEM63BQ5T3F8 832 aa14.73□□□□□ -0.05
USE1-209ENST00000601592 C7orf61Q8IZ16 206 aa14.73□□□□□ -0.05
USE1-209ENST00000601592 IL31RAQ8NI17 732 aa14.73□□□□□ -0.05
USE1-209ENST00000601592 CEP290O15078 2479 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 STXBP3O00186 592 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 TXNP10599 105 aaKnown RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 SCG2P13521 617 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 ADCY7P51828 1080 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 AK2P54819 239 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 EVCP57679 992 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 GJA9P57773 515 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 TTLL4Q14679 1199 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 PGM5Q15124 567 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 ANKRD1Q15327 319 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 KCNA10Q16322 511 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 FSCN1Q16658 493 aaKnown RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 PFKFB3Q16875 520 aaPredicted RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 LRRC26Q2I0M4 334 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 DUSP28Q4G0W2 176 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 CPLX2Q6PUV4 134 aaKnown RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 PCSK9Q8NBP7 692 aaKnown RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 OR6J1Q8NGC5 347 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 VTI1AQ96AJ9 217 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 ZNF274Q96GC6 653 aaPredicted RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 ZFP91Q96JP5 570 aaPredicted RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 UPF3AQ9H1J1 476 aaKnown RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 SLKQ9H2G2 1235 aaPredicted RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 UPF2Q9HAU5 1272 aaKnown RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 RBM27Q9P2N5 1060 aaKnown RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 GNEQ9Y223 722 aaKnown RBP14.72□□□□□ -0.05
USE1-209ENST00000601592 NR2E3Q9Y5X4 410 aa14.72□□□□□ -0.05
USE1-209ENST00000601592 A0A1W2PQ45 241 aaPredicted RBP14.71□□□□□ -0.05
USE1-209ENST00000601592 A0A1W2PQY0 241 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 SPDYE3A6NKU9 549 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 hCG_1984214I3L0E3 225 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 PIK3CDO00329 1044 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 MEIS2O14770 477 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 EIF3JO75822 258 aaKnown RBP14.71□□□□□ -0.05
USE1-209ENST00000601592 ACLYP53396 1101 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 TYW1BQ6NUM6 668 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 PPP1R18Q6NYC8 613 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 TRIM22Q8IYM9 498 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 ZNF713Q8N859 430 aaPredicted RBP14.71□□□□□ -0.05
USE1-209ENST00000601592 KLHDC9Q8NEP7 349 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 COPS5Q92905 334 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 TSEN34Q9BSV6 310 aaKnown RBP14.71□□□□□ -0.05
USE1-209ENST00000601592 C22orf23Q9BZE7 217 aa14.71□□□□□ -0.05
USE1-209ENST00000601592 BARHL2Q9NY43 387 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms