RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 STXBP3O00186 592 aa13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 GJB2P29033 226 aa13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 MAP2K5Q13163 448 aa13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 SNRNP48Q6IEG0 339 aaKnown RBP13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 CCDC174Q6PII3 467 aa13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 FAM184AQ8NB25 1140 aa13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 NPLOC4Q8TAT6 608 aa13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 AGBL1Q96MI9 1066 aa13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 ALG1Q9BT22 464 aa13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 COL25A1Q9BXS0 654 aaPredicted RBP13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 MOV10L1Q9BXT6 1211 aaKnown RBP13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 ZMYND12Q9H0C1 365 aa13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 RAVER2Q9HCJ3 691 aaKnown RBP13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 MCM3APO60318 1980 aa13.39□□□□□ -0.27
CHMP2A-207ENST00000600804 GBF1Q92538 1859 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 PIK3CDO00329 1044 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 HSP90AA1P07900 732 aaKnown RBP13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 SNAP25P60880 206 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 TYW1BQ6NUM6 668 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 HEATR3Q7Z4Q2 680 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 TRMT44Q8IYL2 757 aaKnown RBP13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 ABRAQ8N0Z2 381 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 CPXCR1Q8N123 301 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 DAGLBQ8NCG7 672 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 CLEC4DQ8WXI8 215 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 DDX11Q96FC9 970 aa13.38□□□□□ -0.27
CHMP2A-207ENST00000600804 REV3LO60673 3130 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 OPLAHO14841 1288 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 STRNO43815 780 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 PTPREP23469 700 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 CALML3P27482 149 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 GNA11P29992 359 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 GRB14Q14449 540 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 MCF2L2Q86YR7 1114 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 PIBF1Q8WXW3 757 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 TRERF1Q96PN7 1200 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 PHF20Q9BVI0 1012 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 SENP6Q9GZR1 1112 aaPredicted RBP13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 ACAD9Q9H845 621 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 RIC8AQ9NPQ8 531 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 RNF146Q9NTX7 359 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 RIPK3Q9Y572 518 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 CHD9Q3L8U1 2897 aa13.37□□□□□ -0.27
CHMP2A-207ENST00000600804 HOXC6P09630 235 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 ALAS1P13196 640 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 ERCC3P19447 782 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 CYP2C19P33261 490 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 HSD17B4P51659 736 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 MRPL12P52815 198 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 NAPAP54920 295 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 PLS1Q14651 629 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 NPY5RQ15761 445 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 MCTP2Q6DN12 878 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 BICD2Q8TD16 824 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 GPKOWQ92917 476 aaPredicted RBP eCLIP13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 C8orf76Q96K31 380 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 FAM161BQ96MY7 647 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 AIFM3Q96NN9 605 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 VPS54Q9P1Q0 977 aa13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 DDX20Q9UHI6 824 aaKnown RBP13.36□□□□□ -0.27
CHMP2A-207ENST00000600804 SMCO2A6NFE2 343 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 SLC15A5A6NIM6 579 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 PPFIA3O75145 1194 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 MMP1P03956 469 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 CYBAP13498 195 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 DDIT3P35638 169 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 TRIM29Q14134 588 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 USH1GQ495M9 461 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 LARP1BQ659C4 914 aaKnown RBP13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 CUL5Q93034 780 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 PSTPIP2Q9H939 334 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 C6orf50Q9HD87 102 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 PCDHA4Q9UN74 947 aa13.35□□□□□ -0.27
CHMP2A-207ENST00000600804 LOC102724159A0A0B4J2E5 919 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 M0R2N6 131 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 MEIS2O14770 477 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 ADCY7P51828 1080 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 RTP1P59025 263 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 NLRP5P59047 1200 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 AP3B2Q13367 1082 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 PWP2Q15269 919 aaKnown RBP13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 MUM1L1Q5H9M0 696 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 C9orf50Q5SZB4 431 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 ANO1Q5XXA6 986 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 KRT40Q6A162 431 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 FAM109BQ6ICB4 259 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 NCAPG2Q86XI2 1143 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 BRMS1Q9HCU9 246 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 A1CFQ9NQ94 594 aaKnown RBP13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 DAXXQ9UER7 740 aaPredicted RBP13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 MYO9BQ13459 2157 aa13.34□□□□□ -0.27
CHMP2A-207ENST00000600804 LCTP09848 1927 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms