RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 PLCG1P19174 1290 aa20.66■□□□□ 0.9
ARHGEF1-221ENST00000600387 ASIC1P78348 528 aa20.66■□□□□ 0.9
ARHGEF1-221ENST00000600387 CHRNDQ07001 517 aa20.66■□□□□ 0.9
ARHGEF1-221ENST00000600387 CABP7Q86V35 215 aa20.66■□□□□ 0.9
ARHGEF1-221ENST00000600387 DAGLBQ8NCG7 672 aa20.66■□□□□ 0.9
ARHGEF1-221ENST00000600387 CCDC43Q96MW1 224 aaKnown RBP20.66■□□□□ 0.9
ARHGEF1-221ENST00000600387 PSMB7Q99436 277 aa20.66■□□□□ 0.9
ARHGEF1-221ENST00000600387 NDST4Q9H3R1 872 aa20.66■□□□□ 0.9
ARHGEF1-221ENST00000600387 SRRM3A6NNA2 597 aaPredicted RBP20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 KRT14P02533 472 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 IL6STP40189 918 aaPredicted RBP20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 ATP1A2P50993 1020 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 NAP1L1P55209 391 aaKnown RBP20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 DDR1Q08345 913 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 RASGRP4Q8TDF6 673 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 SMARCAL1Q9NZC9 954 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 EHD2Q9NZN4 543 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 GGA2Q9UJY4 613 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 PCDHA6Q9UN73 950 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 PCDHA8Q9Y5H6 950 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 FLT1P17948 1338 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 LOC102724159A0A0B4J2E5 919 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 FGFR1OPO95684 399 aaKnown RBP20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 PWP2Q15269 919 aaKnown RBP20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 KLHDC7AQ5VTJ3 777 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 KCTD16Q68DU8 428 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 CADPS2Q86UW7 1296 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 SH2D3CQ8N5H7 860 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 LRRC15Q8TF66 581 aa20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 GPKOWQ92917 476 aaPredicted RBP eCLIP20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 RNPC3Q96LT9 517 aaKnown RBP20.65■□□□□ 0.9
ARHGEF1-221ENST00000600387 ZNF233A6NK53 670 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 MAN2A1Q16706 1144 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 SUSD4Q5VX71 490 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 NAA35Q5VZE5 725 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 CENPPQ6IPU0 288 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 A1CFQ9NQ94 594 aaKnown RBP20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 FAM207AQ9NSI2 230 aaPredicted RBP20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 LAMB2P55268 1798 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 SSU72P8A0A1W2PR75 194 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 LRRC53A6NM62 1247 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 NCK2O43639 380 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 PPP1R37O75864 691 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 FCER1AP12319 257 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 NR1D1P20393 614 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 INF2Q27J81 1249 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 FAM47AQ5JRC9 791 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 RPAINQ86UA6 219 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 EDEM3Q9BZQ6 932 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 MMRN2Q9H8L6 949 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 NFU1Q9UMS0 254 aa20.64■□□□□ 0.89
ARHGEF1-221ENST00000600387 GRID2IPA4D2P6 1211 aa20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 EPHB6O15197 1021 aa20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 HEXIM1O94992 359 aaKnown RBP20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 GLI1P08151 1106 aa20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 MAP2K2P36507 400 aa20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 CARSP49589 748 aaKnown RBP20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 ASTE1Q2TB18 679 aaPredicted RBP20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 ARHGAP27Q6ZUM4 889 aa20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 RRAGAQ7L523 313 aa20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 GPATCH11Q8N954 259 aa20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 WHAMMQ8TF30 809 aa20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 EPB41L5Q9HCM4 733 aa20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 SALL4Q9UJQ4 1053 aa20.63■□□□□ 0.89
ARHGEF1-221ENST00000600387 PHLPP1O60346 1717 aa20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 HMGB1P1B2RPK0 211 aaPredicted RBP20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 PTGISQ16647 500 aa20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 ZNF473Q8WTR7 871 aaKnown RBP20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 SEMA6BQ9H3T3 888 aa20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 TSPY2A6NKD2 308 aa20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 GNAQP50148 359 aa20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 KIAA0895Q8NCT3 520 aa20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 MTMR8Q96EF0 704 aa20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 ATP6V1G3Q96LB4 118 aa20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 SLC4A9Q96Q91 983 aa20.62■□□□□ 0.89
ARHGEF1-221ENST00000600387 COL1A1P02452 1464 aaPredicted RBP20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 RBAK-RBAKDNI3L0D1 243 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 GUCY1A3Q02108 690 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 RASSF7Q02833 373 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 GUCY2DQ02846 1103 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 PLCB4Q15147 1175 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 TXNRD1Q16881 649 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 PDXDC1Q6P996 788 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 IFT81Q8WYA0 676 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 PIK3R5Q8WYR1 880 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 BAP1Q92560 729 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 KIAA1551Q9HCM1 1747 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 MYO1FO00160 1098 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 NKRFO15226 690 aaKnown RBP eCLIP20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 OR52Z1P0C646 297 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 FAM153BP0C7A2 387 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 MDH1P40925 334 aaKnown RBP20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 FAM153CQ494X1 144 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 RCSD1Q6JBY9 416 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 MS4A14Q96JA4 679 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 TACO1Q9BSH4 297 aaKnown RBP20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 LUC7LQ9NQ29 371 aaKnown RBP20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 FAM153AQ9UHL3 310 aa20.61■□□□□ 0.89
ARHGEF1-221ENST00000600387 GYG1P46976 350 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms