RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 LGALS16A8MUM7 142 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 CEP104O60308 925 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 HLA-DOAP06340 250 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 ARHGAP44Q17R89 818 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 CT47A1Q5JQC4 288 aaPredicted RBP13.75□□□□□ -0.21
USHBP1-207ENST00000597928 RCSD1Q6JBY9 416 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 C8orf74Q6P047 294 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 PDXDC2PQ6P474 469 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 TBC1D5Q92609 795 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 KIFC2Q96AC6 838 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 NDST4Q9H3R1 872 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 HAUS4Q9H6D7 363 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 HOMER2Q9NSB8 354 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 PANK4Q9NVE7 773 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 POTEB3A0JP26 581 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 GOLGA6BA6NDN3 693 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 POTECB2RU33 542 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 KLHL30Q0D2K2 578 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 BRD3Q15059 726 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 FOXR1Q6PIV2 292 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 POTEBQ6S5H4 581 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 FBXO33Q7Z6M2 555 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 AMIGO3Q86WK7 504 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 ADSSL1Q8N142 457 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 MICALL1Q8N3F8 863 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 FUT8Q9BYC5 575 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 TRIM9Q9C026 710 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 MAD2L2Q9UI95 211 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 PCDHA1Q9Y5I3 950 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 SLC37A4O43826 429 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 TRIM37O94972 964 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 RASA1P20936 1047 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 CCNE1P24864 410 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 GUCY2DQ02846 1103 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 KIAA0753Q2KHM9 967 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 SHROOM1Q2M3G4 852 aaPredicted RBP13.75□□□□□ -0.21
USHBP1-207ENST00000597928 SYCP3Q8IZU3 236 aa13.75□□□□□ -0.21
USHBP1-207ENST00000597928 MYMKA6NI61 221 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 SERPINB2P05120 415 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 KIF11P52732 1056 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 TPH2Q8IWU9 490 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 AFAP1L1Q8TED9 768 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 COG1Q8WTW3 980 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 BCL9O00512 1426 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 C5P01031 1676 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 RCCD1A6NED2 376 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 SSR1P43307 286 aaKnown RBP13.74□□□□□ -0.21
USHBP1-207ENST00000597928 CKAP4Q07065 602 aaKnown RBP13.74□□□□□ -0.21
USHBP1-207ENST00000597928 PIGOQ8TEQ8 1089 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 CEP89Q96ST8 783 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 ANKZF1Q9H8Y5 726 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 BARHL2Q9NY43 387 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 KDM3BQ7LBC6 1761 aa13.74□□□□□ -0.21
USHBP1-207ENST00000597928 GOLGA6CA6NDK9 693 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 BACH1O14867 736 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 PRPF6O94906 941 aaKnown RBP13.73□□□□□ -0.21
USHBP1-207ENST00000597928 GCNT3O95395 438 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 GOLGA6DP0CG33 693 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 ACTN1P12814 892 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 WHAMMP3Q1A5X7 153 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 MYOCDQ8IZQ8 938 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 GOLGA6AQ9NYA3 693 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 THRAP3Q9Y2W1 955 aaKnown RBP13.73□□□□□ -0.21
USHBP1-207ENST00000597928 CTDP1Q9Y5B0 961 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-207ENST00000597928 POTEFA5A3E0 1075 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 SPDYE3A6NKU9 549 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 STXBP3O00186 592 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 KCNK3O14649 394 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 FUT2Q10981 343 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 ADAM9Q13443 819 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 FAM26FQ5R3K3 315 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 POTEEQ6S8J3 1075 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 CPXCR1Q8N123 301 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 HDAC7Q8WUI4 952 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 KRT12Q99456 494 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 AP1M1Q9BXS5 423 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 LRRIQ3A6PVS8 624 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-207ENST00000597928 TBCAO75347 108 aaKnown RBP13.73□□□□□ -0.21
USHBP1-207ENST00000597928 GGCXP38435 758 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 CYP2J2P51589 502 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 MRPL12P52815 198 aaKnown RBP13.73□□□□□ -0.21
USHBP1-207ENST00000597928 TRIM14Q14142 442 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 CDKAL1Q5VV42 579 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 LRRC1Q9BTT6 524 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 CHORDC1Q9UHD1 332 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-207ENST00000597928 NARFQ9UHQ1 456 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 PCDHA13Q9Y5I0 950 aa13.73□□□□□ -0.21
USHBP1-207ENST00000597928 CLRN2A0PK11 232 aa13.72□□□□□ -0.21
USHBP1-207ENST00000597928 EPHB6O15197 1021 aa13.72□□□□□ -0.21
USHBP1-207ENST00000597928 FGFR1OPO95684 399 aaKnown RBP13.72□□□□□ -0.21
USHBP1-207ENST00000597928 TRAPPC10P48553 1259 aa13.72□□□□□ -0.21
USHBP1-207ENST00000597928 CCT5P48643 541 aa13.72□□□□□ -0.21
USHBP1-207ENST00000597928 PCDHAC2Q9Y5I4 1007 aa13.72□□□□□ -0.21
USHBP1-207ENST00000597928 HSF2BPO75031 334 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms