RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 EPHB4P54760 987 aa25.03■■□□□ 1.6
C19orf54-205ENST00000596809 FPGSQ05932 587 aa25.03■■□□□ 1.6
C19orf54-205ENST00000596809 CREB3L3Q68CJ9 461 aa25.03■■□□□ 1.6
C19orf54-205ENST00000596809 CASC1Q6TDU7 716 aa25.03■■□□□ 1.6
C19orf54-205ENST00000596809 IWS1Q96ST2 819 aa25.03■■□□□ 1.6
C19orf54-205ENST00000596809 MTA3Q9BTC8 594 aa25.03■■□□□ 1.6
C19orf54-205ENST00000596809 LY9Q9HBG7 655 aa25.03■■□□□ 1.6
C19orf54-205ENST00000596809 GPHNQ9NQX3 736 aaPredicted RBP25.03■■□□□ 1.6
C19orf54-205ENST00000596809 CD4P01730 458 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 MCM5P33992 734 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 CPT1AP50416 773 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 HSD17B4P51659 736 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 PSMC6P62333 389 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 TRAF1Q13077 416 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 TTLL4Q14679 1199 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 STXBP2Q15833 593 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 ARHGEF16Q5VV41 709 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 COPS5Q92905 334 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 SEZ6LQ9BYH1 1024 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 POLR3EQ9NVU0 708 aa25.02■■□□□ 1.6
C19orf54-205ENST00000596809 MAP3K20Q9NYL2 800 aaKnown RBP25.02■■□□□ 1.6
C19orf54-205ENST00000596809 PNMA6FA0A0J9YX94 578 aa25.01■■□□□ 1.59
C19orf54-205ENST00000596809 GHRHRQ02643 423 aa25.01■■□□□ 1.59
C19orf54-205ENST00000596809 TMTC2Q8N394 836 aa25.01■■□□□ 1.59
C19orf54-205ENST00000596809 DEFB123Q8N688 67 aa25.01■■□□□ 1.59
C19orf54-205ENST00000596809 MAP3K14Q99558 947 aa25.01■■□□□ 1.59
C19orf54-205ENST00000596809 ARIH2O95376 493 aa25■■□□□ 1.59
C19orf54-205ENST00000596809 MYL3P08590 195 aa25■■□□□ 1.59
C19orf54-205ENST00000596809 EIF2AK2P19525 551 aaKnown RBP25■■□□□ 1.59
C19orf54-205ENST00000596809 PURAQ00577 322 aaKnown RBP25■■□□□ 1.59
C19orf54-205ENST00000596809 COL9A3Q14050 684 aaPredicted RBP25■■□□□ 1.59
C19orf54-205ENST00000596809 BRDTQ58F21 947 aaPredicted RBP25■■□□□ 1.59
C19orf54-205ENST00000596809 MFSD5Q6N075 450 aa25■■□□□ 1.59
C19orf54-205ENST00000596809 CCDC62Q6P9F0 684 aa25■■□□□ 1.59
C19orf54-205ENST00000596809 SEPT14Q6ZU15 432 aa25■■□□□ 1.59
C19orf54-205ENST00000596809 Q7L0L9 218 aa25■■□□□ 1.59
C19orf54-205ENST00000596809 ZNF654Q8IZM8 581 aa25■■□□□ 1.59
C19orf54-205ENST00000596809 SAMD3Q8N6K7 520 aa25■■□□□ 1.59
C19orf54-205ENST00000596809 TMEM87BQ96K49 555 aa25■■□□□ 1.59
C19orf54-205ENST00000596809 PXMP2Q9NR77 195 aa25■■□□□ 1.59
C19orf54-205ENST00000596809 DDAH1O94760 285 aa24.99■■□□□ 1.59
C19orf54-205ENST00000596809 NR3C2P08235 984 aa24.99■■□□□ 1.59
C19orf54-205ENST00000596809 CTCFLQ8NI51 663 aaPredicted RBP24.99■■□□□ 1.59
C19orf54-205ENST00000596809 MYL10Q9BUA6 226 aa24.99■■□□□ 1.59
C19orf54-205ENST00000596809 A6NJR5 290 aa24.98■■□□□ 1.59
C19orf54-205ENST00000596809 SH2B2O14492 632 aaPredicted RBP24.98■■□□□ 1.59
C19orf54-205ENST00000596809 EIF3JO75822 258 aaKnown RBP24.98■■□□□ 1.59
C19orf54-205ENST00000596809 HOXA13P31271 388 aaPredicted RBP24.98■■□□□ 1.59
C19orf54-205ENST00000596809 KIF5BP33176 963 aa24.98■■□□□ 1.59
C19orf54-205ENST00000596809 NFXL1Q6ZNB6 911 aa24.98■■□□□ 1.59
C19orf54-205ENST00000596809 CCDC136Q96JN2 1154 aa24.98■■□□□ 1.59
C19orf54-205ENST00000596809 MTG1Q9BT17 334 aaPredicted RBP24.98■■□□□ 1.59
C19orf54-205ENST00000596809 PPP1R12CQ9BZL4 782 aa24.98■■□□□ 1.59
C19orf54-205ENST00000596809 TRPV6Q9H1D0 765 aa24.98■■□□□ 1.59
C19orf54-205ENST00000596809 CCDC69A6NI79 296 aa24.97■■□□□ 1.59
C19orf54-205ENST00000596809 KPNA6O60684 536 aa24.97■■□□□ 1.59
C19orf54-205ENST00000596809 LY6KQ17RY6 165 aa24.97■■□□□ 1.59
C19orf54-205ENST00000596809 TMEM199Q8N511 208 aa24.97■■□□□ 1.59
C19orf54-205ENST00000596809 PIBF1Q8WXW3 757 aa24.97■■□□□ 1.59
C19orf54-205ENST00000596809 SZT2Q5T011 3432 aa24.97■■□□□ 1.59
C19orf54-205ENST00000596809 GCOM1H8Y6P7 765 aaPredicted RBP24.96■■□□□ 1.59
C19orf54-205ENST00000596809 B4GALT4O60513 344 aa24.96■■□□□ 1.59
C19orf54-205ENST00000596809 CDC45O75419 566 aa24.96■■□□□ 1.59
C19orf54-205ENST00000596809 POLR2MP0CAP2 368 aa24.96■■□□□ 1.59
C19orf54-205ENST00000596809 LIFRP42702 1097 aa24.96■■□□□ 1.59
C19orf54-205ENST00000596809 RNF20Q5VTR2 975 aa24.96■■□□□ 1.59
C19orf54-205ENST00000596809 RNPC3Q96LT9 517 aaKnown RBP24.96■■□□□ 1.59
C19orf54-205ENST00000596809 PDCD2LQ9BRP1 358 aa24.96■■□□□ 1.59
C19orf54-205ENST00000596809 MTMR10Q9NXD2 777 aa24.96■■□□□ 1.59
C19orf54-205ENST00000596809 GH1P01241 217 aa24.95■■□□□ 1.58
C19orf54-205ENST00000596809 CSF2RAP15509 400 aa24.95■■□□□ 1.58
C19orf54-205ENST00000596809 SMARCA1P28370 1054 aa24.95■■□□□ 1.58
C19orf54-205ENST00000596809 CYP2C18P33260 490 aa24.95■■□□□ 1.58
C19orf54-205ENST00000596809 PPIGQ13427 754 aaKnown RBP eCLIP24.95■■□□□ 1.589e-7■□□□□ 10.9
C19orf54-205ENST00000596809 FAM109BQ6ICB4 259 aaPredicted RBP24.95■■□□□ 1.58
C19orf54-205ENST00000596809 LZTS2Q9BRK4 669 aa24.95■■□□□ 1.58
C19orf54-205ENST00000596809 SPZ1Q9BXG8 430 aa24.95■■□□□ 1.58
C19orf54-205ENST00000596809 ALDH8A1Q9H2A2 487 aaPredicted RBP24.95■■□□□ 1.58
C19orf54-205ENST00000596809 HIPK3Q9H422 1215 aa24.95■■□□□ 1.58
C19orf54-205ENST00000596809 LAMA3Q16787 3333 aa24.94■■□□□ 1.58
C19orf54-205ENST00000596809 MYCLP12524 364 aaPredicted RBP24.94■■□□□ 1.58
C19orf54-205ENST00000596809 GNAQP50148 359 aa24.94■■□□□ 1.58
C19orf54-205ENST00000596809 C16orf59Q7L2K0 433 aa24.94■■□□□ 1.58
C19orf54-205ENST00000596809 FCHSD1Q86WN1 690 aa24.94■■□□□ 1.58
C19orf54-205ENST00000596809 AFG1LQ8WV93 481 aa24.94■■□□□ 1.58
C19orf54-205ENST00000596809 RRP36Q96EU6 259 aaKnown RBP24.94■■□□□ 1.58
C19orf54-205ENST00000596809 LRRC2Q9BYS8 371 aa24.94■■□□□ 1.58
C19orf54-205ENST00000596809 DDX41Q9UJV9 622 aaKnown RBP24.94■■□□□ 1.58
C19orf54-205ENST00000596809 CALM1P0DP23 149 aa24.93■■□□□ 1.58
C19orf54-205ENST00000596809 CALM2P0DP24 149 aa24.93■■□□□ 1.58
C19orf54-205ENST00000596809 CALM3P0DP25 149 aa24.93■■□□□ 1.58
C19orf54-205ENST00000596809 SMAD3P84022 425 aaKnown RBP24.93■■□□□ 1.58
C19orf54-205ENST00000596809 ARHGAP1Q07960 439 aa24.93■■□□□ 1.58
C19orf54-205ENST00000596809 PGM5Q15124 567 aa24.93■■□□□ 1.58
C19orf54-205ENST00000596809 NBPF20Q3BBV1 942 aa24.93■■□□□ 1.58
C19orf54-205ENST00000596809 VSIG10LQ86VR7 867 aa24.93■■□□□ 1.58
C19orf54-205ENST00000596809 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.93■■□□□ 1.584e-7■□□□□ 9
C19orf54-205ENST00000596809 SLC12A7Q9Y666 1083 aa24.93■■□□□ 1.58
C19orf54-205ENST00000596809 MRVI1Q9Y6F6 885 aa24.93■■□□□ 1.58
C19orf54-205ENST00000596809 SUPT20HL2P0C7V6 817 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms