RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 GPR153Q6NV75 609 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 Q7L0L9 218 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 ZNF654Q8IZM8 581 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 OR6J1Q8NGC5 347 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 MAF1Q9H063 256 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 ANO2Q9NQ90 1003 aa15.18■□□□□ 0.02
LIG1-212ENST00000596549 MRPL11Q9Y3B7 192 aaKnown RBP15.18■□□□□ 0.02
LIG1-212ENST00000596549 SH2B2O14492 632 aaPredicted RBP15.17■□□□□ 0.02
LIG1-212ENST00000596549 PRC1O43663 620 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 CABYRO75952 493 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 CFBP00751 764 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 EIF2AK2P19525 551 aaKnown RBP15.17■□□□□ 0.02
LIG1-212ENST00000596549 PURAQ00577 322 aaKnown RBP15.17■□□□□ 0.02
LIG1-212ENST00000596549 ITGA7Q13683 1181 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 CCDC62Q6P9F0 684 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 MCF2L2Q86YR7 1114 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 SCFD2Q8WU76 684 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 VTI1AQ96AJ9 217 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 MPHOSPH6Q99547 160 aaKnown RBP15.17■□□□□ 0.02
LIG1-212ENST00000596549 PXMP2Q9NR77 195 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 PTPRSQ13332 1948 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 UMODL1Q5DID0 1318 aa15.17■□□□□ 0.02
LIG1-212ENST00000596549 B4GALT4O60513 344 aa15.16■□□□□ 0.02
LIG1-212ENST00000596549 DDAH1O94760 285 aa15.16■□□□□ 0.02
LIG1-212ENST00000596549 TIMP1P01033 207 aa15.16■□□□□ 0.02
LIG1-212ENST00000596549 FPGSQ05932 587 aa15.16■□□□□ 0.02
LIG1-212ENST00000596549 CATIPQ7Z7H3 387 aa15.16■□□□□ 0.02
LIG1-212ENST00000596549 IL31RAQ8NI17 732 aa15.16■□□□□ 0.02
LIG1-212ENST00000596549 NSUN6Q8TEA1 469 aaKnown RBP15.16■□□□□ 0.02
LIG1-212ENST00000596549 RMDN3Q96TC7 470 aa15.16■□□□□ 0.02
LIG1-212ENST00000596549 MTA3Q9BTC8 594 aa15.16■□□□□ 0.02
LIG1-212ENST00000596549 PPP1R12CQ9BZL4 782 aa15.16■□□□□ 0.02
LIG1-212ENST00000596549 PCDHA1Q9Y5I3 950 aa15.16■□□□□ 0.02
LIG1-212ENST00000596549 NKRFO15226 690 aaKnown RBP eCLIP15.15■□□□□ 0.02
LIG1-212ENST00000596549 ZEB2O60315 1214 aa15.15■□□□□ 0.02
LIG1-212ENST00000596549 TXNP10599 105 aaKnown RBP15.15■□□□□ 0.02
LIG1-212ENST00000596549 RXRAP19793 462 aa15.15■□□□□ 0.02
LIG1-212ENST00000596549 HOXA13P31271 388 aaPredicted RBP15.15■□□□□ 0.02
LIG1-212ENST00000596549 CPT1AP50416 773 aa15.15■□□□□ 0.02
LIG1-212ENST00000596549 TMEM87BQ96K49 555 aa15.15■□□□□ 0.02
LIG1-212ENST00000596549 PDCD2LQ9BRP1 358 aa15.15■□□□□ 0.02
LIG1-212ENST00000596549 CDH23Q9H251 3354 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 A6NJR5 290 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 TLR3O15455 904 aaKnown RBP15.14■□□□□ 0.01
LIG1-212ENST00000596549 CDC45O75419 566 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 RGS20O76081 388 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 PLEKHA8P1O95397 391 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 MYL3P08590 195 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 MCM5P33992 734 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 ARHGAP1Q07960 439 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 TTLL4Q14679 1199 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 LY6KQ17RY6 165 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 ARHGEF16Q5VV41 709 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 MFSD5Q6N075 450 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 CASC1Q6TDU7 716 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 SEPT14Q6ZU15 432 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 RAB11FIP4Q86YS3 637 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 DEFB123Q8N688 67 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 PPP1R13LQ8WUF5 828 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 IWS1Q96ST2 819 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 MAP3K14Q99558 947 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 SPZ1Q9BXG8 430 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 LRRC2Q9BYS8 371 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 POLR3EQ9NVU0 708 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 FRMPD4Q14CM0 1322 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 COL6A3P12111 3177 aa15.14■□□□□ 0.01
LIG1-212ENST00000596549 PNMA6FA0A0J9YX94 578 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 B4DLN1 442 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 NR3C2P08235 984 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 MMP3P08254 477 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 CSF2RAP15509 400 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 MRPL12P52815 198 aaKnown RBP15.13■□□□□ 0.01
LIG1-212ENST00000596549 PGM5Q15124 567 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 STXBP2Q15833 593 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 CTCFLQ8NI51 663 aaPredicted RBP15.13■□□□□ 0.01
LIG1-212ENST00000596549 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 RNPC3Q96LT9 517 aaKnown RBP15.13■□□□□ 0.01
LIG1-212ENST00000596549 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.13■□□□□ 0.019e-7■■■□□ 19.2
LIG1-212ENST00000596549 TRPV6Q9H1D0 765 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 WNT8AQ9H1J5 351 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 ALDH8A1Q9H2A2 487 aaPredicted RBP15.13■□□□□ 0.01
LIG1-212ENST00000596549 MTMR10Q9NXD2 777 aa15.13■□□□□ 0.01
LIG1-212ENST00000596549 TRIP12Q14669 1992 aaPredicted RBP15.13■□□□□ 0.01
LIG1-212ENST00000596549 CYP2C18P33260 490 aa15.12■□□□□ 0.01
LIG1-212ENST00000596549 LIFRP42702 1097 aa15.12■□□□□ 0.01
LIG1-212ENST00000596549 ADCK5Q3MIX3 580 aa15.12■□□□□ 0.01
LIG1-212ENST00000596549 C16orf59Q7L2K0 433 aa15.12■□□□□ 0.01
LIG1-212ENST00000596549 RASEFQ8IZ41 740 aa15.12■□□□□ 0.01
LIG1-212ENST00000596549 CMTR1Q8N1G2 835 aaKnown RBP15.12■□□□□ 0.01
LIG1-212ENST00000596549 SRBD1Q8N5C6 995 aaKnown RBP15.12■□□□□ 0.01
LIG1-212ENST00000596549 CCDC136Q96JN2 1154 aa15.12■□□□□ 0.01
LIG1-212ENST00000596549 MTG1Q9BT17 334 aaPredicted RBP15.12■□□□□ 0.01
LIG1-212ENST00000596549 NOC4LQ9BVI4 516 aaKnown RBP15.12■□□□□ 0.01
LIG1-212ENST00000596549 HIPK3Q9H422 1215 aa15.12■□□□□ 0.01
LIG1-212ENST00000596549 TRMT13Q9NUP7 481 aaKnown RBP15.12■□□□□ 0.01
LIG1-212ENST00000596549 MAP3K20Q9NYL2 800 aaKnown RBP15.12■□□□□ 0.01
LIG1-212ENST00000596549 SIP14410 1827 aa15.11■□□□□ 0.01
LIG1-212ENST00000596549 CCDC69A6NI79 296 aa15.11■□□□□ 0.01
LIG1-212ENST00000596549 GH1P01241 217 aa15.11■□□□□ 0.01
LIG1-212ENST00000596549 NFXL1Q6ZNB6 911 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms