RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 MRPL12P52815 198 aaKnown RBP25.68■■□□□ 1.7
SPTBN4-209ENST00000596411 CHMP4BP1P59074 171 aa25.68■■□□□ 1.7
SPTBN4-209ENST00000596411 ZBED6P86452 979 aa25.68■■□□□ 1.7
SPTBN4-209ENST00000596411 MIIPQ5JXC2 388 aa25.68■■□□□ 1.7
SPTBN4-209ENST00000596411 HYIQ5T013 277 aa25.68■■□□□ 1.7
SPTBN4-209ENST00000596411 APOBEC3HQ6NTF7 200 aaKnown RBP25.68■■□□□ 1.7
SPTBN4-209ENST00000596411 WDR59Q6PJI9 974 aa25.68■■□□□ 1.7
SPTBN4-209ENST00000596411 REXO2Q9Y3B8 237 aaKnown RBP25.68■■□□□ 1.7
SPTBN4-209ENST00000596411 B4DLN1 442 aa25.67■■□□□ 1.7
SPTBN4-209ENST00000596411 RIMBP2O15034 1052 aa25.67■■□□□ 1.7
SPTBN4-209ENST00000596411 NPM3O75607 178 aaKnown RBP25.67■■□□□ 1.7
SPTBN4-209ENST00000596411 TDP2O95551 362 aa25.67■■□□□ 1.7
SPTBN4-209ENST00000596411 FGFR1OPO95684 399 aaKnown RBP25.67■■□□□ 1.7
SPTBN4-209ENST00000596411 CCDC170Q8IYT3 715 aa25.67■■□□□ 1.7
SPTBN4-209ENST00000596411 MYMKA6NI61 221 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 PPP1R11O60927 126 aaPredicted RBP25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 FCER1AP12319 257 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 LRRC63Q05C16 580 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 TEX35Q5T0J7 233 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 KRT79Q5XKE5 535 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 MKL1Q969V6 931 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 CDK5RAP3Q96JB5 506 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 CHP1Q99653 195 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 KRT83P78385 493 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 TBC1D8BQ0IIM8 1120 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 BRD3Q15059 726 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 KIF4BQ2VIQ3 1234 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 CC2D1AQ6P1N0 951 aaPredicted RBP25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 ZDHHC15Q96MV8 337 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 SLF1Q9BQI6 1058 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 GPCPD1Q9NPB8 672 aa25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 ATF5Q9Y2D1 282 aaPredicted RBP25.66■■□□□ 1.7
SPTBN4-209ENST00000596411 ZNF646O15015 1829 aaPredicted RBP25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 CCDC151A5D8V7 595 aa25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 PSMD14O00487 310 aa25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 PDE6BP35913 854 aa25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 HDLBPQ00341 1268 aaKnown RBP25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 AMPD2Q01433 879 aa25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 KRT27Q7Z3Y8 459 aa25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 PODNQ7Z5L7 613 aa25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 MSANTD4Q8NCY6 345 aa25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 DHX36Q9H2U1 1008 aaKnown RBP25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 SEMA6BQ9H3T3 888 aa25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 PRDM4Q9UKN5 801 aa25.65■■□□□ 1.7
SPTBN4-209ENST00000596411 RASSF10A6NK89 507 aa25.64■■□□□ 1.7
SPTBN4-209ENST00000596411 HNRNPH3P31942 346 aaKnown RBP25.64■■□□□ 1.7
SPTBN4-209ENST00000596411 CYLC1P35663 651 aaPredicted RBP25.64■■□□□ 1.7
SPTBN4-209ENST00000596411 PROM2Q8N271 834 aa25.64■■□□□ 1.7
SPTBN4-209ENST00000596411 EHBP1Q8NDI1 1231 aa25.64■■□□□ 1.7
SPTBN4-209ENST00000596411 NOC4LQ9BVI4 516 aaKnown RBP25.64■■□□□ 1.7
SPTBN4-209ENST00000596411 KDM3AQ9Y4C1 1321 aa25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 MTIF2P46199 727 aaKnown RBP25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 MCM6Q14566 821 aa25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 FKBP15Q5T1M5 1219 aa25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 SNX29Q8TEQ0 813 aa25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 DCAF4Q8WV16 495 aa25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 HNRNPLLQ8WVV9 542 aaKnown RBP25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 PARD6BQ9BYG5 372 aa25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 ZNHIT6Q9NWK9 470 aaKnown RBP25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 NYAP2Q9P242 653 aa25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 RAB21Q9UL25 225 aa25.64■■□□□ 1.69
SPTBN4-209ENST00000596411 EIF3CLB5ME19 914 aaKnown RBP25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 TUBBP07437 444 aa25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 TRIM21P19474 475 aaKnown RBP25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 MCTP2Q6DN12 878 aa25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 MOXD1Q6UVY6 613 aa25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 MASTLQ96GX5 879 aa25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 EIF3CQ99613 913 aaKnown RBP25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 UBXN6Q9BZV1 441 aa25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 DDX25Q9UHL0 483 aaKnown RBP25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 MYH7BA7E2Y1 1941 aa25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 ARFGEF1Q9Y6D6 1849 aa25.63■■□□□ 1.69
SPTBN4-209ENST00000596411 F8W031 263 aaPredicted RBP25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 TNNI2P48788 182 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 ARHGAP27Q6ZUM4 889 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 HAS1Q92839 578 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 MBOAT7Q96N66 472 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 IDI2Q9BXS1 227 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 TRIM37O94972 964 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 KIF20AO95235 890 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 CRKP46108 304 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 PLA2G4AP47712 749 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 EIF6P56537 245 aaKnown RBP25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 HERVK_113P62684 666 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 CLEC10AQ8IUN9 316 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 NT5C3AQ9H0P0 336 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 QTRT2Q9H974 415 aaKnown RBP25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 ARFGAP3Q9NP61 516 aa25.62■■□□□ 1.69
SPTBN4-209ENST00000596411 POTEMA6NI47 508 aa25.61■■□□□ 1.69
SPTBN4-209ENST00000596411 PES1O00541 588 aaKnown RBP25.61■■□□□ 1.69
SPTBN4-209ENST00000596411 MAN2A1Q16706 1144 aa25.61■■□□□ 1.69
SPTBN4-209ENST00000596411 TTBK2Q6IQ55 1244 aa25.61■■□□□ 1.69
SPTBN4-209ENST00000596411 MSL3Q8N5Y2 521 aaKnown RBP25.61■■□□□ 1.69
SPTBN4-209ENST00000596411 AKT1S1Q96B36 256 aa25.61■■□□□ 1.69
SPTBN4-209ENST00000596411 TMX4Q9H1E5 349 aaPredicted RBP25.61■■□□□ 1.69
SPTBN4-209ENST00000596411 SLC39A2Q9NP94 309 aa25.61■■□□□ 1.69
SPTBN4-209ENST00000596411 CYP3A7-CYP3A51PA0A087WV96 503 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 TBC1D8O95759 1140 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 CYP3A7P24462 503 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 USP11P51784 963 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms