RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 COL9A3Q14050 684 aaPredicted RBP18.63■□□□□ 0.57
USHBP1-205ENST00000595993 CREB3L3Q68CJ9 461 aa18.63■□□□□ 0.57
USHBP1-205ENST00000595993 TTBK2Q6IQ55 1244 aa18.63■□□□□ 0.57
USHBP1-205ENST00000595993 ADD3Q9UEY8 706 aaKnown RBP18.63■□□□□ 0.57
USHBP1-205ENST00000595993 PURAQ00577 322 aaKnown RBP18.62■□□□□ 0.57
USHBP1-205ENST00000595993 SYDE2Q5VT97 1194 aa18.62■□□□□ 0.57
USHBP1-205ENST00000595993 OTOP2Q7RTS6 562 aa18.62■□□□□ 0.57
USHBP1-205ENST00000595993 ENAHQ8N8S7 591 aaPredicted RBP18.62■□□□□ 0.57
USHBP1-205ENST00000595993 CLEC4DQ8WXI8 215 aa18.62■□□□□ 0.57
USHBP1-205ENST00000595993 ZSCAN10Q96SZ4 725 aaPredicted RBP18.62■□□□□ 0.57
USHBP1-205ENST00000595993 NKX2-4Q9H2Z4 354 aa18.62■□□□□ 0.57
USHBP1-205ENST00000595993 SLC28A3Q9HAS3 691 aa18.62■□□□□ 0.57
USHBP1-205ENST00000595993 POLR3EQ9NVU0 708 aa18.62■□□□□ 0.57
USHBP1-205ENST00000595993 THEGQ9P2T0 379 aa18.62■□□□□ 0.57
USHBP1-205ENST00000595993 MTMR7Q9Y216 660 aa18.62■□□□□ 0.57
USHBP1-205ENST00000595993 TNKSO95271 1327 aa18.62■□□□□ 0.57
USHBP1-205ENST00000595993 TANC1Q9C0D5 1861 aa18.62■□□□□ 0.57
USHBP1-205ENST00000595993 TNFRSF10AO00220 468 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 PFKMP08237 780 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 SNHG28P0DPA3 235 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 EDNRBP24530 442 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 SLC16A2P36021 539 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 CCDC96Q2M329 555 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 IQCA1Q86XH1 822 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 DGKHQ86XP1 1220 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 RPUSD2Q8IZ73 545 aaKnown RBP18.61■□□□□ 0.57
USHBP1-205ENST00000595993 TTC14Q96N46 770 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 ASB2Q96Q27 587 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 WDR11Q9BZH6 1224 aa18.61■□□□□ 0.57
USHBP1-205ENST00000595993 WDR19Q8NEZ3 1342 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 MYO9BQ13459 2157 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 PDHBP11177 359 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 CPT1AP50416 773 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 ANTXR2P58335 489 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 TRDNQ13061 729 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 SEC23AQ15436 765 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 SLC30A10Q6XR72 485 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 MB21D2Q8IYB1 491 aaPredicted RBP18.6■□□□□ 0.57
USHBP1-205ENST00000595993 NCOA7Q8NI08 942 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 ANKS1AQ92625 1134 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 PNMA2Q9UL42 364 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 PCDHA11Q9Y5I1 949 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 SLC4A7Q9Y6M7 1214 aa18.6■□□□□ 0.57
USHBP1-205ENST00000595993 SCN5AQ14524 2016 aa18.59■□□□□ 0.57
USHBP1-205ENST00000595993 SUPT20HL2P0C7V6 817 aa18.59■□□□□ 0.57
USHBP1-205ENST00000595993 CHST3Q7LGC8 479 aa18.59■□□□□ 0.57
USHBP1-205ENST00000595993 RALYLQ86SE5 291 aaKnown RBP18.59■□□□□ 0.57
USHBP1-205ENST00000595993 SCLYQ96I15 445 aa18.59■□□□□ 0.57
USHBP1-205ENST00000595993 UBAC1Q9BSL1 405 aa18.59■□□□□ 0.57
USHBP1-205ENST00000595993 TRMT13Q9NUP7 481 aaKnown RBP18.59■□□□□ 0.57
USHBP1-205ENST00000595993 FRMPD2Q68DX3 1309 aaPredicted RBP18.58■□□□□ 0.57
USHBP1-205ENST00000595993 NCOR1O75376 2440 aa18.58■□□□□ 0.57
USHBP1-205ENST00000595993 A6NJR5 290 aa18.58■□□□□ 0.56
USHBP1-205ENST00000595993 NKRFO15226 690 aaKnown RBP eCLIP18.58■□□□□ 0.56
USHBP1-205ENST00000595993 RABGGTBP53611 331 aa18.58■□□□□ 0.56
USHBP1-205ENST00000595993 ZNF543Q08ER8 600 aa18.58■□□□□ 0.56
USHBP1-205ENST00000595993 CCDC178Q5BJE1 867 aa18.58■□□□□ 0.56
USHBP1-205ENST00000595993 RASEFQ8IZ41 740 aa18.58■□□□□ 0.56
USHBP1-205ENST00000595993 PNMA1Q8ND90 353 aa18.58■□□□□ 0.56
USHBP1-205ENST00000595993 MTG1Q9BT17 334 aaPredicted RBP18.58■□□□□ 0.56
USHBP1-205ENST00000595993 SENP2Q9HC62 589 aa18.58■□□□□ 0.56
USHBP1-205ENST00000595993 CYP2C9P11712 490 aa18.57■□□□□ 0.56
USHBP1-205ENST00000595993 POU3F3P20264 500 aaPredicted RBP18.57■□□□□ 0.56
USHBP1-205ENST00000595993 RPS6P62753 249 aaKnown RBP18.57■□□□□ 0.56
USHBP1-205ENST00000595993 MRPS5P82675 430 aaKnown RBP18.57■□□□□ 0.56
USHBP1-205ENST00000595993 TTLL4Q14679 1199 aa18.57■□□□□ 0.56
USHBP1-205ENST00000595993 NFRKBQ6P4R8 1299 aa18.57■□□□□ 0.56
USHBP1-205ENST00000595993 RNF207Q6ZRF8 634 aa18.57■□□□□ 0.56
USHBP1-205ENST00000595993 DNERQ8NFT8 737 aa18.57■□□□□ 0.56
USHBP1-205ENST00000595993 PPM1EQ8WY54 764 aa18.57■□□□□ 0.56
USHBP1-205ENST00000595993 KAT14Q9H8E8 782 aa18.57■□□□□ 0.56
USHBP1-205ENST00000595993 GPCPD1Q9NPB8 672 aa18.57■□□□□ 0.56
USHBP1-205ENST00000595993 PTPDC1A2A3K4 754 aa18.56■□□□□ 0.56
USHBP1-205ENST00000595993 PITPNM1O00562 1244 aa18.56■□□□□ 0.56
USHBP1-205ENST00000595993 MYOGP15173 224 aa18.56■□□□□ 0.56
USHBP1-205ENST00000595993 ATP2A2P16615 1042 aaKnown RBP18.56■□□□□ 0.56
USHBP1-205ENST00000595993 RFC2P35250 354 aa18.56■□□□□ 0.56
USHBP1-205ENST00000595993 PTPN11Q06124 597 aaPredicted RBP18.56■□□□□ 0.56
USHBP1-205ENST00000595993 PPP2R2DQ66LE6 453 aa18.56■□□□□ 0.56
USHBP1-205ENST00000595993 RGS22Q8NE09 1264 aa18.56■□□□□ 0.56
USHBP1-205ENST00000595993 OR6J1Q8NGC5 347 aa18.56■□□□□ 0.56
USHBP1-205ENST00000595993 SCFD2Q8WU76 684 aa18.56■□□□□ 0.56
USHBP1-205ENST00000595993 MAF1Q9H063 256 aa18.56■□□□□ 0.56
USHBP1-205ENST00000595993 GPHNQ9NQX3 736 aaPredicted RBP18.56■□□□□ 0.56
USHBP1-205ENST00000595993 IFIT3O14879 490 aaKnown RBP18.55■□□□□ 0.56
USHBP1-205ENST00000595993 PRC1O43663 620 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 KPNA6O60684 536 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 IGFBP4P22692 258 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 CALML3P27482 149 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 HSPA4P34932 840 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 PPP2R5BQ15173 497 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 NBPF20Q3BBV1 942 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 ADCK5Q3MIX3 580 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 IFIT1BQ5T764 474 aaKnown RBP18.55■□□□□ 0.56
USHBP1-205ENST00000595993 RNF20Q5VTR2 975 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 ADAMTS19Q8TE59 1207 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 KCNB2Q92953 911 aa18.55■□□□□ 0.56
USHBP1-205ENST00000595993 REC8O95072 547 aa18.54■□□□□ 0.56
USHBP1-205ENST00000595993 MYL3P08590 195 aa18.54■□□□□ 0.56
USHBP1-205ENST00000595993 GOLGA8HP0CJ92 632 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms