RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 FTOQ9C0B1 505 aaKnown RBP eCLIP14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 MTMR10Q9NXD2 777 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 ELP1O95163 1332 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 EYSQ5T1H1 3165 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 CCL15-CCL14A0A0B4J2E2 113 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 SPTLC2O15270 562 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 TRAK2O60296 914 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 BMP15O95972 392 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 CFBP00751 764 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 TAL1P17542 331 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 STAT3P40763 770 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 CLK2P49760 499 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 UBE2HP62256 183 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 AP3B2Q13367 1082 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 MOGSQ13724 837 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 PLS1Q14651 629 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 TMEM132BQ14DG7 1078 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 CCL15Q16663 113 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 TKFCQ3LXA3 575 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 SAMD3Q8N6K7 520 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 MB21D1Q8N884 522 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 TRERF1Q96PN7 1200 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 ASCC2Q9H1I8 757 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 ZFYVE28Q9HCC9 887 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 PNMA3Q9UL41 463 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 PCDHB6Q9Y5E3 794 aa14.87□□□□□ -0.03
SHKBP1-209ENST00000595803 SPDYE3A6NKU9 549 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 PIK3CDO00329 1044 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 MEIS2O14770 477 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 ATP2A1O14983 1001 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 EVI5O60447 810 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 PPP6R2O75170 966 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 GADD45BO75293 160 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 FARP2O94887 1054 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 ME1P48163 572 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 LACTBP83111 547 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 SNRNP48Q6IEG0 339 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 NEK8Q86SG6 692 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 REPS2Q8NFH8 660 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 TBCKQ8TEA7 893 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 BRI3BPQ8WY22 251 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 TBC1D5Q92609 795 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 MS4A4AQ96JQ5 239 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 PGBD1Q96JS3 809 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 MAP3K20Q9NYL2 800 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 DDX49Q9Y6V7 483 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 MYH15Q9Y2K3 1946 aa14.86□□□□□ -0.03
SHKBP1-209ENST00000595803 GJB1P08034 283 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 HOXA13P31271 388 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 MCM7P33993 719 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 HERVK_113P62684 666 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 KIF22Q14807 665 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 PTPAQ15257 358 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 LETM2Q2VYF4 491 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 LBX2Q6XYB7 198 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 ANKRD23Q86SG2 305 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 FCHSD1Q86WN1 690 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 GTF3C2Q8WUA4 911 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 CLEC4DQ8WXI8 215 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 NAP1L4Q99733 375 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 TEX13BQ9BXU2 312 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 ANO3Q9BYT9 981 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 EHMT1Q9H9B1 1298 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 HOMER2Q9NSB8 354 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 RNF146Q9NTX7 359 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 SLC45A1Q9Y2W3 748 aa14.85□□□□□ -0.03
SHKBP1-209ENST00000595803 PTPRFP10586 1907 aa14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 BTBD19C9JJ37 291 aa14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 PDHXO00330 501 aa14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 OPLAHO14841 1288 aa14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 CCNT1O60563 726 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 MBD3O95983 291 aa14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 CCL5P13501 91 aa14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 MARCKSP29966 332 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 FAM43AQ8N2R8 423 aa14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 ZNF214Q9UL59 606 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 PCDHA7Q9UN72 937 aa14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 RIPK3Q9Y572 518 aa14.84□□□□□ -0.03
SHKBP1-209ENST00000595803 GNRH1P01148 92 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 USP11P51784 963 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 PRMT2P55345 433 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 PTGDRQ13258 359 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 ORC2Q13416 577 aaPredicted RBP14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 MUM1L1Q5H9M0 696 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 ADALQ6DHV7 355 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 RNF207Q6ZRF8 634 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 CHST13Q8NET6 341 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 PAGR1Q9BTK6 254 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 BTBD7Q9P203 1132 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 RABGAP1Q9Y3P9 1069 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 LOC285556D6RIA3 1793 aa14.83□□□□□ -0.04
SHKBP1-209ENST00000595803 NFIBO00712 420 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 TLR2O60603 784 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 CUTAO60888 179 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 SLC25A27O95847 323 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 GRK4P32298 578 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 COPB2P35606 906 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 ZNF76P36508 570 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 HSD17B4P51659 736 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms