RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 PDE4DQ08499 809 aa17.74■□□□□ 0.43
USE1-206ENST00000595101 LRRC41Q15345 812 aa17.74■□□□□ 0.43
USE1-206ENST00000595101 PKN1Q16512 942 aa17.74■□□□□ 0.43
USE1-206ENST00000595101 ARHGEF16Q5VV41 709 aa17.74■□□□□ 0.43
USE1-206ENST00000595101 NSUN6Q8TEA1 469 aaKnown RBP17.74■□□□□ 0.43
USE1-206ENST00000595101 ZNF274Q96GC6 653 aaPredicted RBP17.74■□□□□ 0.43
USE1-206ENST00000595101 PCDH10Q9P2E7 1040 aa17.74■□□□□ 0.43
USE1-206ENST00000595101 ADAMTS3O15072 1205 aa17.73■□□□□ 0.43
USE1-206ENST00000595101 LARGE1O95461 756 aa17.73■□□□□ 0.43
USE1-206ENST00000595101 UBE2SQ16763 222 aa17.73■□□□□ 0.43
USE1-206ENST00000595101 C22orf23Q9BZE7 217 aa17.73■□□□□ 0.43
USE1-206ENST00000595101 SYNRGQ9UMZ2 1314 aa17.72■□□□□ 0.43
USE1-206ENST00000595101 CCDC196A0A1B0GTZ2 297 aa17.72■□□□□ 0.43
USE1-206ENST00000595101 ADAMTS4O75173 837 aa17.72■□□□□ 0.43
USE1-206ENST00000595101 TNFAIP2Q03169 654 aa17.72■□□□□ 0.43
USE1-206ENST00000595101 SCRN1Q12765 414 aa17.72■□□□□ 0.43
USE1-206ENST00000595101 PPP2R5BQ15173 497 aa17.72■□□□□ 0.43
USE1-206ENST00000595101 ANKLE1Q8NAG6 615 aa17.72■□□□□ 0.43
USE1-206ENST00000595101 ALDH8A1Q9H2A2 487 aaPredicted RBP17.72■□□□□ 0.43
USE1-206ENST00000595101 PSTPIP2Q9H939 334 aa17.72■□□□□ 0.43
USE1-206ENST00000595101 GNEQ9Y223 722 aaKnown RBP17.72■□□□□ 0.43
USE1-206ENST00000595101 STXBP3O00186 592 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 EIF5BO60841 1220 aaKnown RBP17.71■□□□□ 0.43
USE1-206ENST00000595101 ARIH2O95376 493 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 NR3C2P08235 984 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 COL6A1P12109 1028 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 TRAF1Q13077 416 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 NECAB2Q7Z6G3 386 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 PDCD2LQ9BRP1 358 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 SLC26A6Q9BXS9 759 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 SENP6Q9GZR1 1112 aaPredicted RBP17.71■□□□□ 0.43
USE1-206ENST00000595101 MAF1Q9H063 256 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 C11orf49Q9H6J7 331 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 VTA1Q9NP79 307 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 CTAGE5O15320 804 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 DUSP11O75319 330 aaKnown RBP17.71■□□□□ 0.43
USE1-206ENST00000595101 RGS20O76081 388 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
USE1-206ENST00000595101 IFNAR1P17181 557 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 PGM5Q15124 567 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 ME3Q16798 604 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 SEPT14Q6ZU15 432 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 NECAB1Q8N987 351 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 COPS5Q92905 334 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 FERMT2Q96AC1 680 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 WDR11Q9BZH6 1224 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 BARHL2Q9NY43 387 aa17.71■□□□□ 0.43
USE1-206ENST00000595101 MAP3K20Q9NYL2 800 aaKnown RBP17.71■□□□□ 0.43
USE1-206ENST00000595101 DNM1LO00429 736 aa17.7■□□□□ 0.42
USE1-206ENST00000595101 PRPF3O43395 683 aaKnown RBP17.7■□□□□ 0.42
USE1-206ENST00000595101 RBM25P49756 843 aaKnown RBP17.7■□□□□ 0.42
USE1-206ENST00000595101 NAPAP54920 295 aa17.7■□□□□ 0.42
USE1-206ENST00000595101 BEX3Q00994 111 aa17.7■□□□□ 0.42
USE1-206ENST00000595101 PFKFB3Q16875 520 aaPredicted RBP17.7■□□□□ 0.42
USE1-206ENST00000595101 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
USE1-206ENST00000595101 LOC102724159A0A0B4J2E5 919 aa17.69■□□□□ 0.42
USE1-206ENST00000595101 RBM47A0AV96 593 aaKnown RBP17.69■□□□□ 0.42
USE1-206ENST00000595101 DYNC1LI2O43237 492 aaPredicted RBP17.69■□□□□ 0.42
USE1-206ENST00000595101 C6orf222P0C671 652 aaPredicted RBP17.69■□□□□ 0.42
USE1-206ENST00000595101 SCG2P13521 617 aa17.69■□□□□ 0.42
USE1-206ENST00000595101 ATN1P54259 1190 aaPredicted RBP17.69■□□□□ 0.42
USE1-206ENST00000595101 PWP2Q15269 919 aaKnown RBP17.69■□□□□ 0.42
USE1-206ENST00000595101 IQSEC1Q6DN90 963 aa17.69■□□□□ 0.42
USE1-206ENST00000595101 CCSAPQ6IQ19 270 aaPredicted RBP17.69■□□□□ 0.42
USE1-206ENST00000595101 ARRDC4Q8NCT1 418 aa17.69■□□□□ 0.42
USE1-206ENST00000595101 PGBD1Q96JS3 809 aa17.69■□□□□ 0.42
USE1-206ENST00000595101 IWS1Q96ST2 819 aa17.69■□□□□ 0.42
USE1-206ENST00000595101 PIK3CDO00329 1044 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 STXBP2Q15833 593 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 LY6KQ17RY6 165 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 TLK2Q86UE8 772 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 VSIG10LQ86VR7 867 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 SAMD3Q8N6K7 520 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 KLHDC9Q8NEP7 349 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 AIFM3Q96NN9 605 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 SLKQ9H2G2 1235 aaPredicted RBP17.68■□□□□ 0.42
USE1-206ENST00000595101 LRRC37A2A6NM11 1700 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 FRMPD3Q5JV73 1810 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 PFKFB2O60825 505 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 CTDNEP1O95476 244 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 GJA9P57773 515 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 MRPS9P82933 396 aaKnown RBP17.68■□□□□ 0.42
USE1-206ENST00000595101 KCNA10Q16322 511 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 LRRC26Q2I0M4 334 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 DUSP28Q4G0W2 176 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 DPF3Q92784 378 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 CUL5Q93034 780 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 RNF26Q9BY78 433 aaPredicted RBP17.68■□□□□ 0.42
USE1-206ENST00000595101 TMEM260Q9NX78 707 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 RTEL1Q9NZ71 1219 aa17.68■□□□□ 0.42
USE1-206ENST00000595101 KBTBD13C9JR72 458 aa17.67■□□□□ 0.42
USE1-206ENST00000595101 CPLX1O14810 134 aa17.67■□□□□ 0.42
USE1-206ENST00000595101 ST3GAL1Q11201 340 aa17.67■□□□□ 0.42
USE1-206ENST00000595101 RNF180Q86T96 592 aa17.67■□□□□ 0.42
USE1-206ENST00000595101 UPF3AQ9H1J1 476 aaKnown RBP17.67■□□□□ 0.42
USE1-206ENST00000595101 RIC8AQ9NPQ8 531 aa17.67■□□□□ 0.42
USE1-206ENST00000595101 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
USE1-206ENST00000595101 EIF3JO75822 258 aaKnown RBP17.66■□□□□ 0.42
USE1-206ENST00000595101 TXNP10599 105 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms