RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 CALM1P0DP23 149 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 CALM2P0DP24 149 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 CALM3P0DP25 149 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 CPA1P15085 419 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 BMP8BP34820 402 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 GNAQP50148 359 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 FXR1P51114 621 aaKnown RBP eCLIP17.09■□□□□ 0.33
USE1-205ENST00000594724 KRT32Q14532 448 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 CXCL17Q6UXB2 119 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 SGMS1Q86VZ5 419 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 FANCBQ8NB91 859 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 COPS5Q92905 334 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 KCNB2Q92953 911 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 RRP36Q96EU6 259 aaKnown RBP17.09■□□□□ 0.33
USE1-205ENST00000594724 UBE2OQ9C0C9 1292 aaKnown RBP17.09■□□□□ 0.33
USE1-205ENST00000594724 PDLIM7Q9NR12 457 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 PXMP2Q9NR77 195 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 SNX14Q9Y5W7 946 aa17.09■□□□□ 0.33
USE1-205ENST00000594724 ELP1O95163 1332 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 TRIM43BA6NCK2 446 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 ARIH2O95376 493 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 TXNP10599 105 aaKnown RBP17.08■□□□□ 0.32
USE1-205ENST00000594724 SMARCA1P28370 1054 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 HSPA4P34932 840 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 GHRHRQ02643 423 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 TRAF1Q13077 416 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 STXBP2Q15833 593 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 SEPT14Q6ZU15 432 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 MICU3Q86XE3 530 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 SCFD2Q8WU76 684 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.32
USE1-205ENST00000594724 IWS1Q96ST2 819 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 LBHD1Q9BQE6 289 aaPredicted RBP17.08■□□□□ 0.32
USE1-205ENST00000594724 LZTS2Q9BRK4 669 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 BRPF3Q9ULD4 1205 aa17.08■□□□□ 0.32
USE1-205ENST00000594724 hCG_1642624A0A1W2PR95 340 aa17.07■□□□□ 0.32
USE1-205ENST00000594724 GCOM1H8Y6P7 765 aaPredicted RBP17.07■□□□□ 0.32
USE1-205ENST00000594724 ZEB2O60315 1214 aa17.07■□□□□ 0.32
USE1-205ENST00000594724 REC8O95072 547 aa17.07■□□□□ 0.32
USE1-205ENST00000594724 NR3C2P08235 984 aa17.07■□□□□ 0.32
USE1-205ENST00000594724 CLTBP09497 229 aa17.07■□□□□ 0.32
USE1-205ENST00000594724 POLR2MP0CAP2 368 aa17.07■□□□□ 0.32
USE1-205ENST00000594724 PPP2R5BQ15173 497 aa17.07■□□□□ 0.32
USE1-205ENST00000594724 APOA5Q6Q788 366 aa17.07■□□□□ 0.32
USE1-205ENST00000594724 FCHSD1Q86WN1 690 aa17.07■□□□□ 0.32
USE1-205ENST00000594724 OR6J1Q8NGC5 347 aa17.07■□□□□ 0.32
USE1-205ENST00000594724 JAKMIP1Q96N16 626 aaKnown RBP17.07■□□□□ 0.32
USE1-205ENST00000594724 MAP3K20Q9NYL2 800 aaKnown RBP17.07■□□□□ 0.32
USE1-205ENST00000594724 A0A0U1RQG5 324 aaPredicted RBP17.06■□□□□ 0.32
USE1-205ENST00000594724 DCDC2CA8MYV0 355 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 ARVCFO00192 962 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 SLC34A2O95436 690 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
USE1-205ENST00000594724 MYCLP12524 364 aaPredicted RBP17.06■□□□□ 0.32
USE1-205ENST00000594724 ITGB8P26012 769 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 CDK7P50613 346 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 FAAP100Q0VG06 881 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 TTLL4Q14679 1199 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 LY6KQ17RY6 165 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 TMTC3Q6ZXV5 915 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 ANKRD33Q7Z3H0 272 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 SAMD3Q8N6K7 520 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 BADQ92934 168 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 TOX2Q96NM4 488 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 PDCD2LQ9BRP1 358 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 TMEM39AQ9NV64 488 aa17.06■□□□□ 0.32
USE1-205ENST00000594724 SEC63Q9UGP8 760 aaKnown RBP17.06■□□□□ 0.32
USE1-205ENST00000594724 RANBP2P49792 3224 aaKnown RBP17.06■□□□□ 0.32
USE1-205ENST00000594724 KLF18A0A0U1RQI7 1052 aa17.05■□□□□ 0.32
USE1-205ENST00000594724 A0A1W2PPC1 479 aa17.05■□□□□ 0.32
USE1-205ENST00000594724 NKRFO15226 690 aaKnown RBP eCLIP17.05■□□□□ 0.32
USE1-205ENST00000594724 MYL3P08590 195 aa17.05■□□□□ 0.32
USE1-205ENST00000594724 PSMC6P62333 389 aa17.05■□□□□ 0.32
USE1-205ENST00000594724 FGD1P98174 961 aa17.05■□□□□ 0.32
USE1-205ENST00000594724 CCDC62Q6P9F0 684 aa17.05■□□□□ 0.32
USE1-205ENST00000594724 IL31RAQ8NI17 732 aa17.05■□□□□ 0.32
USE1-205ENST00000594724 ZFP91Q96JP5 570 aaPredicted RBP17.05■□□□□ 0.32
USE1-205ENST00000594724 GRIN2DO15399 1336 aa17.04■□□□□ 0.32
USE1-205ENST00000594724 ZBTB43O43298 467 aa17.04■□□□□ 0.32
USE1-205ENST00000594724 EIF3JO75822 258 aaKnown RBP17.04■□□□□ 0.32
USE1-205ENST00000594724 CABYRO75952 493 aa17.04■□□□□ 0.32
USE1-205ENST00000594724 ITGA7Q13683 1181 aa17.04■□□□□ 0.32
USE1-205ENST00000594724 PGM5Q15124 567 aa17.04■□□□□ 0.32
USE1-205ENST00000594724 BLOC1S2Q6QNY1 142 aa17.04■□□□□ 0.32
USE1-205ENST00000594724 Q6ZUG5 572 aa17.04■□□□□ 0.32
USE1-205ENST00000594724 TDHQ8IZJ6 230 aa17.04■□□□□ 0.32
USE1-205ENST00000594724 NAP1L2Q9ULW6 460 aaPredicted RBP17.04■□□□□ 0.32
USE1-205ENST00000594724 GOLGA8AA7E2F4 631 aa17.03■□□□□ 0.32
USE1-205ENST00000594724 GOLGA8BA8MQT2 603 aa17.03■□□□□ 0.32
USE1-205ENST00000594724 SOX1O00570 391 aaPredicted RBP17.03■□□□□ 0.32
USE1-205ENST00000594724 KIAA0355O15063 1070 aa17.03■□□□□ 0.32
USE1-205ENST00000594724 CPT1AP50416 773 aa17.03■□□□□ 0.32
USE1-205ENST00000594724 APOBRQ0VD83 1088 aa17.03■□□□□ 0.32
USE1-205ENST00000594724 RTN1Q16799 776 aa17.03■□□□□ 0.32
USE1-205ENST00000594724 USP17L6PQ6QN14 398 aa17.03■□□□□ 0.32
USE1-205ENST00000594724 VSIG10LQ86VR7 867 aa17.03■□□□□ 0.32
USE1-205ENST00000594724 SLC43A3Q8NBI5 491 aa17.03■□□□□ 0.32
USE1-205ENST00000594724 USP26Q9BXU7 913 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms