RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CYP3A4P08684 503 aa23.56■■□□□ 1.36
PNKP-203ENST00000593946 CST9Q5W186 159 aa23.56■■□□□ 1.36
PNKP-203ENST00000593946 POTEEQ6S8J3 1075 aa23.56■■□□□ 1.36
PNKP-203ENST00000593946 LBX2Q6XYB7 198 aa23.56■■□□□ 1.36
PNKP-203ENST00000593946 ASCC2Q9H1I8 757 aaPredicted RBP23.56■■□□□ 1.36
PNKP-203ENST00000593946 RNF146Q9NTX7 359 aa23.56■■□□□ 1.36
PNKP-203ENST00000593946 CIITAP33076 1130 aa23.56■■□□□ 1.36
PNKP-203ENST00000593946 IRX3P78415 501 aaPredicted RBP23.56■■□□□ 1.36
PNKP-203ENST00000593946 GPAT2Q6NUI2 795 aa23.56■■□□□ 1.36
PNKP-203ENST00000593946 MB21D1Q8N884 522 aa23.56■■□□□ 1.36
PNKP-203ENST00000593946 EHMT1Q9H9B1 1298 aa23.56■■□□□ 1.36
PNKP-203ENST00000593946 TKFCQ3LXA3 575 aa23.55■■□□□ 1.36
PNKP-203ENST00000593946 FSD2A1L4K1 749 aa23.54■■□□□ 1.36
PNKP-203ENST00000593946 COL20A1Q9P218 1284 aa23.54■■□□□ 1.36
PNKP-203ENST00000593946 RPTORQ8N122 1335 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 POLR2DO15514 142 aaKnown RBP23.53■■□□□ 1.36
PNKP-203ENST00000593946 STAT3P40763 770 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 PABPC4Q13310 644 aaKnown RBP eCLIP23.53■■□□□ 1.36
PNKP-203ENST00000593946 CKAP2LQ8IYA6 745 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 MS4A4AQ96JQ5 239 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 AK8Q96MA6 479 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 SDF4Q9BRK5 362 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 FUCA2Q9BTY2 467 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 LCTP09848 1927 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 A0A087X0B3 334 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 FXR2P51116 673 aaKnown RBP eCLIP23.53■■□□□ 1.36
PNKP-203ENST00000593946 HERVK_113P62684 666 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 RPS6P62753 249 aaKnown RBP23.53■■□□□ 1.36
PNKP-203ENST00000593946 LONRF3Q496Y0 759 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 Q4G0T1 1027 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 IGSF22Q8N9C0 903 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 SYTL5Q8TDW5 730 aaPredicted RBP23.53■■□□□ 1.36
PNKP-203ENST00000593946 HAS1Q92839 578 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 LENG9Q96B70 501 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 KCNMB3Q9NPA1 279 aa23.53■■□□□ 1.36
PNKP-203ENST00000593946 FRMPD4Q14CM0 1322 aa23.52■■□□□ 1.36
PNKP-203ENST00000593946 FAM86B1E9PN63 330 aa23.52■■□□□ 1.36
PNKP-203ENST00000593946 FAM86B2P0C5J1 330 aa23.52■■□□□ 1.36
PNKP-203ENST00000593946 GTF2A2P52657 109 aa23.52■■□□□ 1.36
PNKP-203ENST00000593946 KRBA2Q6ZNG9 492 aa23.52■■□□□ 1.36
PNKP-203ENST00000593946 MAF1Q9H063 256 aa23.52■■□□□ 1.36
PNKP-203ENST00000593946 BTBD7Q9P203 1132 aa23.52■■□□□ 1.36
PNKP-203ENST00000593946 CETPP11597 493 aa23.51■■□□□ 1.35
PNKP-203ENST00000593946 TXKP42681 527 aa23.51■■□□□ 1.35
PNKP-203ENST00000593946 PLS1Q14651 629 aa23.51■■□□□ 1.35
PNKP-203ENST00000593946 SLC30A10Q6XR72 485 aa23.51■■□□□ 1.35
PNKP-203ENST00000593946 RNF207Q6ZRF8 634 aa23.51■■□□□ 1.35
PNKP-203ENST00000593946 ELOA2Q8IYF1 753 aaPredicted RBP23.51■■□□□ 1.35
PNKP-203ENST00000593946 PDILTQ8N807 584 aa23.51■■□□□ 1.35
PNKP-203ENST00000593946 ACAD9Q9H845 621 aa23.51■■□□□ 1.35
PNKP-203ENST00000593946 RABGAP1Q9Y3P9 1069 aa23.51■■□□□ 1.35
PNKP-203ENST00000593946 ZBTB48P10074 688 aaPredicted RBP23.5■■□□□ 1.35
PNKP-203ENST00000593946 OSBPP22059 807 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 TECP42680 631 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 SPRYD7Q5W111 196 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 NSMFQ6X4W1 530 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 PANK2Q9BZ23 570 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 CCSER1Q9C0I3 900 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 IGLV3-22A0A075B6J6 115 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 GOLGA6L3A6NEY3 463 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 PP2D1A8MPX8 630 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 TBX3O15119 743 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 ACTN4O43707 911 aaKnown RBP23.5■■□□□ 1.35
PNKP-203ENST00000593946 CDC25AP30304 524 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 TXLNAP40222 546 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 TMEM266Q2M3C6 531 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 PRR16Q569H4 304 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 RIOX2Q8IUF8 465 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 CNNM3Q8NE01 707 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 ETNPPLQ8TBG4 499 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 TSPY26PQ9H489 355 aa23.5■■□□□ 1.35
PNKP-203ENST00000593946 UBXN2AP68543 259 aa23.49■■□□□ 1.35
PNKP-203ENST00000593946 PDIA5Q14554 519 aa23.49■■□□□ 1.35
PNKP-203ENST00000593946 CHST13Q8NET6 341 aa23.49■■□□□ 1.35
PNKP-203ENST00000593946 PYM1Q9BRP8 204 aaKnown RBP23.49■■□□□ 1.35
PNKP-203ENST00000593946 SPATC1LQ9H0A9 340 aa23.49■■□□□ 1.35
PNKP-203ENST00000593946 TTC12Q9H892 705 aaPredicted RBP23.49■■□□□ 1.35
PNKP-203ENST00000593946 SERTAD1Q9UHV2 236 aa23.49■■□□□ 1.35
PNKP-203ENST00000593946 PASKQ96RG2 1323 aa23.49■■□□□ 1.35
PNKP-203ENST00000593946 CNMDO75829 334 aa23.48■■□□□ 1.35
PNKP-203ENST00000593946 ZNF76P36508 570 aa23.48■■□□□ 1.35
PNKP-203ENST00000593946 HUNKP57058 714 aa23.48■■□□□ 1.35
PNKP-203ENST00000593946 BAATQ14032 418 aaPredicted RBP23.48■■□□□ 1.35
PNKP-203ENST00000593946 E2F4Q16254 413 aa23.48■■□□□ 1.35
PNKP-203ENST00000593946 CYP2W1Q8TAV3 490 aa23.48■■□□□ 1.35
PNKP-203ENST00000593946 RAB34Q9BZG1 259 aa23.48■■□□□ 1.35
PNKP-203ENST00000593946 GPBP1L1Q9HC44 474 aaPredicted RBP23.48■■□□□ 1.35
PNKP-203ENST00000593946 USP25Q9UHP3 1055 aa23.48■■□□□ 1.35
PNKP-203ENST00000593946 SLC45A1Q9Y2W3 748 aa23.48■■□□□ 1.35
PNKP-203ENST00000593946 CCL15-CCL14A0A0B4J2E2 113 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 PEX10O60683 326 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 CCDC192P0DO97 292 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 UBA7P41226 1012 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 MKRN3Q13064 507 aaKnown RBP23.47■■□□□ 1.35
PNKP-203ENST00000593946 CCL15Q16663 113 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 SLFN12Q8IYM2 578 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 DHX58Q96C10 678 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 TAAR1Q96RJ0 339 aa23.47■■□□□ 1.35
PNKP-203ENST00000593946 A1CFQ9NQ94 594 aaKnown RBP23.47■■□□□ 1.35
PNKP-203ENST00000593946 PNMA3Q9UL41 463 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms