RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 MRPL12P52815 198 aaKnown RBP22.55■■□□□ 1.2
LSM4-203ENST00000593829 RABEP1Q15276 862 aa22.55■■□□□ 1.2
LSM4-203ENST00000593829 IFFO2Q5TF58 517 aa22.55■■□□□ 1.2
LSM4-203ENST00000593829 MORC4Q8TE76 937 aa22.55■■□□□ 1.2
LSM4-203ENST00000593829 TAAR1Q96RJ0 339 aa22.55■■□□□ 1.2
LSM4-203ENST00000593829 RNF26Q9BY78 433 aaPredicted RBP22.55■■□□□ 1.2
LSM4-203ENST00000593829 MSCO60682 206 aa22.54■■□□□ 1.2
LSM4-203ENST00000593829 CAPN2P17655 700 aa22.54■■□□□ 1.2
LSM4-203ENST00000593829 EN2P19622 333 aaPredicted RBP22.54■■□□□ 1.2
LSM4-203ENST00000593829 SCRN1Q12765 414 aa22.54■■□□□ 1.2
LSM4-203ENST00000593829 ACVR2BQ13705 512 aa22.54■■□□□ 1.2
LSM4-203ENST00000593829 PFKFB3Q16875 520 aaPredicted RBP22.54■■□□□ 1.2
LSM4-203ENST00000593829 NSUN6Q8TEA1 469 aaKnown RBP22.54■■□□□ 1.2
LSM4-203ENST00000593829 RMDN3Q96TC7 470 aa22.54■■□□□ 1.2
LSM4-203ENST00000593829 SLC26A6Q9BXS9 759 aa22.54■■□□□ 1.2
LSM4-203ENST00000593829 GZF1Q9H116 711 aaPredicted RBP22.54■■□□□ 1.2
LSM4-203ENST00000593829 DDX20Q9UHI6 824 aaKnown RBP22.54■■□□□ 1.2
LSM4-203ENST00000593829 ZHX1Q9UKY1 873 aaPredicted RBP22.54■■□□□ 1.2
LSM4-203ENST00000593829 TFRCP02786 760 aaKnown RBP22.53■■□□□ 1.2
LSM4-203ENST00000593829 SCG2P13521 617 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 CLEC17AQ6ZS10 378 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 TRIM22Q8IYM9 498 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 CUL5Q93034 780 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 CRISPLD2Q9H0B8 497 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 PSTPIP2Q9H939 334 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 BRCA2P51587 3418 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 PPFIA3O75145 1194 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 NAPAP54920 295 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 SSRP1Q08945 709 aaKnown RBP22.53■■□□□ 1.2
LSM4-203ENST00000593829 ME3Q16798 604 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 LHX8Q68G74 356 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 PPP1R18Q6NYC8 613 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 TNPO1Q92973 898 aaKnown RBP22.53■■□□□ 1.2
LSM4-203ENST00000593829 BARHL2Q9NY43 387 aa22.53■■□□□ 1.2
LSM4-203ENST00000593829 DDX49Q9Y6V7 483 aaKnown RBP22.53■■□□□ 1.2
LSM4-203ENST00000593829 KIAA0100Q14667 2235 aaKnown RBP22.52■■□□□ 1.2
LSM4-203ENST00000593829 STXBP3O00186 592 aa22.52■■□□□ 1.2
LSM4-203ENST00000593829 PIK3CDO00329 1044 aa22.52■■□□□ 1.2
LSM4-203ENST00000593829 CDKL5O76039 1030 aa22.52■■□□□ 1.2
LSM4-203ENST00000593829 PDE4DQ08499 809 aa22.52■■□□□ 1.2
LSM4-203ENST00000593829 ARHGEF16Q5VV41 709 aa22.52■■□□□ 1.2
LSM4-203ENST00000593829 KATNBL1Q9H079 304 aa22.52■■□□□ 1.2
LSM4-203ENST00000593829 AKR1A1P14550 325 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 EDNRBP24530 442 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 PKN1Q16512 942 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 FCHSD1Q86WN1 690 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 SMARCC2Q8TAQ2 1214 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 SHISA4Q96DD7 197 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 IWS1Q96ST2 819 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 FAM184BQ9ULE4 1060 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 LIMCH1Q9UPQ0 1083 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 TYW1BQ6NUM6 668 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 USP17L6PQ6QN14 398 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 VTA1Q9NP79 307 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 PXMP2Q9NR77 195 aa22.51■■□□□ 1.19
LSM4-203ENST00000593829 MEIS2O14770 477 aa22.5■■□□□ 1.19
LSM4-203ENST00000593829 LARGE1O95461 756 aa22.5■■□□□ 1.19
LSM4-203ENST00000593829 EIF2AK2P19525 551 aaKnown RBP22.5■■□□□ 1.19
LSM4-203ENST00000593829 EEPD1Q7L9B9 569 aa22.5■■□□□ 1.19
LSM4-203ENST00000593829 NECAB1Q8N987 351 aa22.5■■□□□ 1.19
LSM4-203ENST00000593829 GTF3C6Q969F1 213 aa22.5■■□□□ 1.19
LSM4-203ENST00000593829 OGDHLQ9ULD0 1010 aa22.5■■□□□ 1.19
LSM4-203ENST00000593829 MCM3APO60318 1980 aa22.5■■□□□ 1.19
LSM4-203ENST00000593829 CCDC144BQ3MJ40 725 aa22.49■■□□□ 1.19
LSM4-203ENST00000593829 TEX2Q8IWB9 1127 aa22.49■■□□□ 1.19
LSM4-203ENST00000593829 FBXO16Q8IX29 292 aaPredicted RBP22.49■■□□□ 1.19
LSM4-203ENST00000593829 ST18O60284 1047 aa22.49■■□□□ 1.19
LSM4-203ENST00000593829 ANO1Q5XXA6 986 aa22.49■■□□□ 1.19
LSM4-203ENST00000593829 CCDC12Q8WUD4 166 aaPredicted RBP22.49■■□□□ 1.19
LSM4-203ENST00000593829 GLT8D2Q9H1C3 349 aa22.49■■□□□ 1.19
LSM4-203ENST00000593829 SMCO2A6NFE2 343 aa22.48■■□□□ 1.19
LSM4-203ENST00000593829 DEXIO95424 95 aa22.48■■□□□ 1.19
LSM4-203ENST00000593829 RARBP10826 455 aa22.48■■□□□ 1.19
LSM4-203ENST00000593829 ADCY7P51828 1080 aa22.48■■□□□ 1.19
LSM4-203ENST00000593829 STXBP2Q15833 593 aa22.48■■□□□ 1.19
LSM4-203ENST00000593829 PDCD2LQ9BRP1 358 aa22.48■■□□□ 1.19
LSM4-203ENST00000593829 RIC8AQ9NPQ8 531 aa22.48■■□□□ 1.19
LSM4-203ENST00000593829 K7ELQ4 463 aaPredicted RBP22.47■■□□□ 1.19
LSM4-203ENST00000593829 NR3C2P08235 984 aa22.47■■□□□ 1.19
LSM4-203ENST00000593829 TAPT1Q6NXT6 567 aa22.47■■□□□ 1.19
LSM4-203ENST00000593829 ZSCAN31Q96LW9 406 aaPredicted RBP22.47■■□□□ 1.19
LSM4-203ENST00000593829 RGS19P49795 217 aa22.47■■□□□ 1.19
LSM4-203ENST00000593829 UBE2SQ16763 222 aa22.47■■□□□ 1.19
LSM4-203ENST00000593829 ANKLE1Q8NAG6 615 aa22.47■■□□□ 1.19
LSM4-203ENST00000593829 PDGFCQ9NRA1 345 aa22.47■■□□□ 1.19
LSM4-203ENST00000593829 ESYT2A0FGR8 921 aa22.46■■□□□ 1.19
LSM4-203ENST00000593829 PGM5Q15124 567 aa22.46■■□□□ 1.19
LSM4-203ENST00000593829 IQSEC1Q6DN90 963 aa22.46■■□□□ 1.19
LSM4-203ENST00000593829 SH3GLB2Q9NR46 395 aa22.46■■□□□ 1.19
LSM4-203ENST00000593829 LRRC37A2A6NM11 1700 aa22.46■■□□□ 1.19
LSM4-203ENST00000593829 STK36Q9NRP7 1315 aa22.45■■□□□ 1.19
LSM4-203ENST00000593829 CTDNEP1O95476 244 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 ADCYAP1R1P41586 468 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 TNFAIP2Q03169 654 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 CCDC148Q8NFR7 591 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 ZMYND12Q9H0C1 365 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 XPNPEP3Q9NQH7 507 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 FRMPD4Q14CM0 1322 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 SPDYE3A6NKU9 549 aa22.45■■□□□ 1.18
LSM4-203ENST00000593829 ESPNB1AK53 854 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms