RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 ATP2B1P20020 1258 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 COPB2P35606 906 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 SLC39A14Q15043 492 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 INF2Q27J81 1249 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 KLHL40Q2TBA0 621 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 BRI3BPQ8WY22 251 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 ZIC5Q96T25 663 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 TEX13BQ9BXU2 312 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 FTOQ9C0B1 505 aaKnown RBP eCLIP16.68■□□□□ 0.26
CAPN12-202ENST00000593700 RAVER2Q9HCJ3 691 aaKnown RBP16.68■□□□□ 0.26
CAPN12-202ENST00000593700 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.68■□□□□ 0.26
CAPN12-202ENST00000593700 ADAMTS5Q9UNA0 930 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 RABGAP1Q9Y3P9 1069 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 TRAK2O60296 914 aa16.67■□□□□ 0.26
CAPN12-202ENST00000593700 CFBP00751 764 aa16.67■□□□□ 0.26
CAPN12-202ENST00000593700 GCFC2P16383 781 aaKnown RBP16.67■□□□□ 0.26
CAPN12-202ENST00000593700 UBE2SQ16763 222 aa16.67■□□□□ 0.26
CAPN12-202ENST00000593700 TREML2Q5T2D2 321 aa16.67■□□□□ 0.26
CAPN12-202ENST00000593700 SNRNP48Q6IEG0 339 aaKnown RBP16.67■□□□□ 0.26
CAPN12-202ENST00000593700 LBX2Q6XYB7 198 aa16.67■□□□□ 0.26
CAPN12-202ENST00000593700 TBCKQ8TEA7 893 aa16.67■□□□□ 0.26
CAPN12-202ENST00000593700 ANO3Q9BYT9 981 aa16.67■□□□□ 0.26
CAPN12-202ENST00000593700 RNF186Q9NXI6 227 aa16.67■□□□□ 0.26
CAPN12-202ENST00000593700 PCDHB6Q9Y5E3 794 aa16.67■□□□□ 0.26
CAPN12-202ENST00000593700 ZNF536O15090 1300 aa16.67■□□□□ 0.26
CAPN12-202ENST00000593700 PLXNB2O15031 1838 aa16.66■□□□□ 0.26
CAPN12-202ENST00000593700 FAM205CA6NFA0 338 aa16.66■□□□□ 0.26
CAPN12-202ENST00000593700 TOB1P50616 345 aaPredicted RBP16.66■□□□□ 0.26
CAPN12-202ENST00000593700 EARS2Q5JPH6 523 aaKnown RBP16.66■□□□□ 0.26
CAPN12-202ENST00000593700 CCDC73Q6ZRK6 1079 aa16.66■□□□□ 0.26
CAPN12-202ENST00000593700 KRI1Q8N9T8 703 aaKnown RBP16.66■□□□□ 0.26
CAPN12-202ENST00000593700 FERMT2Q96AC1 680 aa16.66■□□□□ 0.26
CAPN12-202ENST00000593700 DDX27Q96GQ7 796 aaKnown RBP16.66■□□□□ 0.26
CAPN12-202ENST00000593700 AGBL1Q96MI9 1066 aa16.66■□□□□ 0.26
CAPN12-202ENST00000593700 PARK7Q99497 189 aaKnown RBP16.66■□□□□ 0.26
CAPN12-202ENST00000593700 ZFYVE28Q9HCC9 887 aa16.66■□□□□ 0.26
CAPN12-202ENST00000593700 RNF146Q9NTX7 359 aa16.66■□□□□ 0.26
CAPN12-202ENST00000593700 TMEM260Q9NX78 707 aa16.66■□□□□ 0.26
CAPN12-202ENST00000593700 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
CAPN12-202ENST00000593700 MEIS2O14770 477 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 NEMFO60524 1076 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 CUTAO60888 179 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 TRPA1O75762 1119 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 MCM7P33993 719 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 PLS1Q14651 629 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 PTPAQ15257 358 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 TAF1CQ15572 869 aaPredicted RBP16.65■□□□□ 0.26
CAPN12-202ENST00000593700 LETM2Q2VYF4 491 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 ADALQ6DHV7 355 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 MOXD1Q6UVY6 613 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 ASCC2Q9H1I8 757 aaPredicted RBP16.65■□□□□ 0.26
CAPN12-202ENST00000593700 ACAD9Q9H845 621 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 FBXO40Q9UH90 709 aa16.65■□□□□ 0.26
CAPN12-202ENST00000593700 A0A1W2PQ27 194 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 A0A1W2PQ64 194 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 A0A1W2PQD8 194 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 BTBD19C9JJ37 291 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 CCNT1O60563 726 aaKnown RBP16.64■□□□□ 0.25
CAPN12-202ENST00000593700 HERVK_113P62684 666 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 ATP2C1P98194 919 aaPredicted RBP16.64■□□□□ 0.25
CAPN12-202ENST00000593700 GHRHRQ02643 423 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 ARL6IP4Q66PJ3 421 aaKnown RBP16.64■□□□□ 0.25
CAPN12-202ENST00000593700 USP17L6PQ6QN14 398 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 CHST13Q8NET6 341 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 REPS2Q8NFH8 660 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 MRPS27Q92552 414 aaKnown RBP16.64■□□□□ 0.25
CAPN12-202ENST00000593700 TRERF1Q96PN7 1200 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 PTPN18Q99952 460 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 CRISPLD2Q9H0B8 497 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 PRDM10Q9NQV6 1147 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 HOMER2Q9NSB8 354 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 ZNF214Q9UL59 606 aaPredicted RBP16.64■□□□□ 0.25
CAPN12-202ENST00000593700 LCTP09848 1927 aa16.64■□□□□ 0.25
CAPN12-202ENST00000593700 ZNFX1Q9P2E3 1918 aaKnown RBP16.64■□□□□ 0.25
CAPN12-202ENST00000593700 PLXNA1Q9UIW2 1896 aa16.63■□□□□ 0.25
CAPN12-202ENST00000593700 PDHXO00330 501 aa16.63■□□□□ 0.25
CAPN12-202ENST00000593700 SREBF1P36956 1147 aa16.63■□□□□ 0.25
CAPN12-202ENST00000593700 STAT3P40763 770 aa16.63■□□□□ 0.25
CAPN12-202ENST00000593700 HSD17B4P51659 736 aa16.63■□□□□ 0.25
CAPN12-202ENST00000593700 USP11P51784 963 aa16.63■□□□□ 0.25
CAPN12-202ENST00000593700 MFSD10Q14728 455 aa16.63■□□□□ 0.25
CAPN12-202ENST00000593700 ZNF174Q15697 407 aa16.63■□□□□ 0.25
CAPN12-202ENST00000593700 SMCR8Q8TEV9 937 aaPredicted RBP16.63■□□□□ 0.25
CAPN12-202ENST00000593700 PGBD1Q96JS3 809 aa16.63■□□□□ 0.25
CAPN12-202ENST00000593700 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
CAPN12-202ENST00000593700 KIAA1217Q5T5P2 1943 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 LOXHD1Q8IVV2 1947 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 OPLAHO14841 1288 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 FOXN1O15353 648 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 GADD45BO75293 160 aaPredicted RBP16.62■□□□□ 0.25
CAPN12-202ENST00000593700 SLC25A27O95847 323 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 MARCKSP29966 332 aaPredicted RBP16.62■□□□□ 0.25
CAPN12-202ENST00000593700 HOXA13P31271 388 aaPredicted RBP16.62■□□□□ 0.25
CAPN12-202ENST00000593700 PRPHP41219 470 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 ARHGAP4P98171 946 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 PTGDRQ13258 359 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 MOGSQ13724 837 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 TMEM132BQ14DG7 1078 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 ARHGEF6Q15052 776 aa16.62■□□□□ 0.25
CAPN12-202ENST00000593700 TMEM266Q2M3C6 531 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms