RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 LRRC37A2A6NM11 1700 aa18.8■□□□□ 0.6
CIRBP-241ENST00000593048 KLRF2D3W0D1 207 aa18.8■□□□□ 0.6
CIRBP-241ENST00000593048 IFIT3O14879 490 aaKnown RBP18.8■□□□□ 0.6
CIRBP-241ENST00000593048 B4GALT4O60513 344 aa18.8■□□□□ 0.6
CIRBP-241ENST00000593048 TMEM240Q5SV17 173 aa18.8■□□□□ 0.6
CIRBP-241ENST00000593048 PSRC1Q6PGN9 363 aaPredicted RBP18.8■□□□□ 0.6
CIRBP-241ENST00000593048 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.8■□□□□ 0.6
CIRBP-241ENST00000593048 STAG2Q8N3U4 1231 aa18.8■□□□□ 0.6
CIRBP-241ENST00000593048 SYTL5Q8TDW5 730 aaPredicted RBP18.8■□□□□ 0.6
CIRBP-241ENST00000593048 RMDN3Q96TC7 470 aa18.8■□□□□ 0.6
CIRBP-241ENST00000593048 CDX2Q99626 313 aaPredicted RBP18.8■□□□□ 0.6
CIRBP-241ENST00000593048 MTG1Q9BT17 334 aaPredicted RBP18.8■□□□□ 0.6
CIRBP-241ENST00000593048 AMNQ9BXJ7 453 aa18.8■□□□□ 0.6
CIRBP-241ENST00000593048 VCANP13611 3396 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 CDH23Q9H251 3354 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 LCTP09848 1927 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 KPNA6O60684 536 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 CFBP00751 764 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 CYP21A2P08686 494 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 CCL23P55773 120 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 PURAQ00577 322 aaKnown RBP18.79■□□□□ 0.6
CIRBP-241ENST00000593048 SART3Q15020 963 aaKnown RBP18.79■□□□□ 0.6
CIRBP-241ENST00000593048 SEC23AQ15436 765 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 STXBP2Q15833 593 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 FAM47CQ5HY64 1035 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 ARHGEF16Q5VV41 709 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 SEPT14Q6ZU15 432 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 ZNF365Q70YC5 407 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 C16orf59Q7L2K0 433 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 COPS5Q92905 334 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 IL23AQ9NPF7 189 aa18.79■□□□□ 0.6
CIRBP-241ENST00000593048 SUPT20HL2P0C7V6 817 aa18.78■□□□□ 0.6
CIRBP-241ENST00000593048 WTAPQ15007 396 aa18.78■□□□□ 0.6
CIRBP-241ENST00000593048 NCOA7Q8NI08 942 aa18.78■□□□□ 0.6
CIRBP-241ENST00000593048 IWS1Q96ST2 819 aa18.78■□□□□ 0.6
CIRBP-241ENST00000593048 ALDH8A1Q9H2A2 487 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-241ENST00000593048 MTIF3Q9H2K0 278 aaKnown RBP18.78■□□□□ 0.6
CIRBP-241ENST00000593048 MAD2L2Q9UI95 211 aa18.78■□□□□ 0.6
CIRBP-241ENST00000593048 TMEM265A0A087WTH1 108 aa18.77■□□□□ 0.6
CIRBP-241ENST00000593048 E7EWF7 191 aa18.77■□□□□ 0.6
CIRBP-241ENST00000593048 SGSM2O43147 1006 aa18.77■□□□□ 0.6
CIRBP-241ENST00000593048 FGBP02675 491 aa18.77■□□□□ 0.6
CIRBP-241ENST00000593048 CHMP4BP1P59074 171 aa18.77■□□□□ 0.6
CIRBP-241ENST00000593048 NOC4LQ9BVI4 516 aaKnown RBP18.77■□□□□ 0.6
CIRBP-241ENST00000593048 TTYH1Q9H313 450 aaPredicted RBP18.77■□□□□ 0.6
CIRBP-241ENST00000593048 TRMT13Q9NUP7 481 aaKnown RBP18.77■□□□□ 0.6
CIRBP-241ENST00000593048 COL20A1Q9P218 1284 aa18.77■□□□□ 0.6
CIRBP-241ENST00000593048 PCDHA1Q9Y5I3 950 aa18.77■□□□□ 0.6
CIRBP-241ENST00000593048 UMODL1Q5DID0 1318 aa18.76■□□□□ 0.59
CIRBP-241ENST00000593048 PALM3A6NDB9 673 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-241ENST00000593048 A6NJR5 290 aa18.76■□□□□ 0.59
CIRBP-241ENST00000593048 ZBTB5O15062 677 aa18.76■□□□□ 0.59
CIRBP-241ENST00000593048 ARIH2O95376 493 aa18.76■□□□□ 0.59
CIRBP-241ENST00000593048 EIF2AK2P19525 551 aaKnown RBP18.76■□□□□ 0.59
CIRBP-241ENST00000593048 DNAJB2P25686 324 aa18.76■□□□□ 0.59
CIRBP-241ENST00000593048 TRAF1Q13077 416 aa18.76■□□□□ 0.59
CIRBP-241ENST00000593048 NBPF20Q3BBV1 942 aa18.76■□□□□ 0.59
CIRBP-241ENST00000593048 CENPQQ7L2Z9 268 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-241ENST00000593048 HOMER1Q86YM7 354 aa18.76■□□□□ 0.59
CIRBP-241ENST00000593048 RPUSD2Q8IZ73 545 aaKnown RBP18.76■□□□□ 0.59
CIRBP-241ENST00000593048 MYLIPQ8WY64 445 aa18.76■□□□□ 0.59
CIRBP-241ENST00000593048 TIFAQ96CG3 184 aa18.76■□□□□ 0.59
CIRBP-241ENST00000593048 GH1P01241 217 aa18.75■□□□□ 0.59
CIRBP-241ENST00000593048 CYP2C9P11712 490 aa18.75■□□□□ 0.59
CIRBP-241ENST00000593048 GRM4Q14833 912 aa18.75■□□□□ 0.59
CIRBP-241ENST00000593048 LY6KQ17RY6 165 aa18.75■□□□□ 0.59
CIRBP-241ENST00000593048 TMEM67Q5HYA8 995 aa18.75■□□□□ 0.59
CIRBP-241ENST00000593048 CHST3Q7LGC8 479 aa18.75■□□□□ 0.59
CIRBP-241ENST00000593048 CATIPQ7Z7H3 387 aa18.75■□□□□ 0.59
CIRBP-241ENST00000593048 EIF3JO75822 258 aaKnown RBP18.74■□□□□ 0.59
CIRBP-241ENST00000593048 NR3C2P08235 984 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 FOSL2P15408 326 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 NFRKBQ6P4R8 1299 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 CCDC62Q6P9F0 684 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 OTOP2Q7RTS6 562 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 AFG1LQ8WV93 481 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 HERVK_113Q902F9 699 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 MAP4K1Q92918 833 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 MTMR8Q96EF0 704 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 SCLYQ96I15 445 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 PXMP2Q9NR77 195 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 MAP3K20Q9NYL2 800 aaKnown RBP18.74■□□□□ 0.59
CIRBP-241ENST00000593048 NOD1Q9Y239 953 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 PRUNE2Q8WUY3 3088 aa18.74■□□□□ 0.59
CIRBP-241ENST00000593048 GRXCR1A8MXD5 290 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 MYCLP12524 364 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-241ENST00000593048 HSD17B4P51659 736 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 RASIP1Q5U651 963 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 MAFAQ8NHW3 353 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-241ENST00000593048 PPP1R13LQ8WUF5 828 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 PIGSQ96S52 555 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 WNT8AQ9H1J5 351 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 ZNF576Q9H609 170 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 SENP2Q9HC62 589 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 MSRAQ9UJ68 235 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 RBM8AQ9Y5S9 174 aaKnown RBP18.73■□□□□ 0.59
CIRBP-241ENST00000593048 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 TAF6LQ9Y6J9 622 aa18.73■□□□□ 0.59
CIRBP-241ENST00000593048 SPTBN5Q9NRC6 3674 aaKnown RBP18.72■□□□□ 0.59
CIRBP-241ENST00000593048 PPP1R11O60927 126 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms