RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 ZMYM1Q5SVZ6 1142 aa23.15■■□□□ 1.3
PRKCSH-216ENST00000592445 RNF207Q6ZRF8 634 aa23.15■■□□□ 1.3
PRKCSH-216ENST00000592445 FRMPD2Q68DX3 1309 aaPredicted RBP23.14■■□□□ 1.3
PRKCSH-216ENST00000592445 TTC41PQ6P2S7 1318 aa23.14■■□□□ 1.3
PRKCSH-216ENST00000592445 BTNL9Q6UXG8 535 aa23.14■■□□□ 1.29
PRKCSH-216ENST00000592445 CCDC155Q8N6L0 562 aa23.14■■□□□ 1.29
PRKCSH-216ENST00000592445 COPS5Q92905 334 aa23.14■■□□□ 1.29
PRKCSH-216ENST00000592445 ZBED2Q9BTP6 218 aa23.14■■□□□ 1.29
PRKCSH-216ENST00000592445 GPCPD1Q9NPB8 672 aa23.14■■□□□ 1.29
PRKCSH-216ENST00000592445 TOMM22Q9NS69 142 aa23.14■■□□□ 1.29
PRKCSH-216ENST00000592445 TXNP10599 105 aaKnown RBP23.13■■□□□ 1.29
PRKCSH-216ENST00000592445 PTGISQ16647 500 aa23.13■■□□□ 1.29
PRKCSH-216ENST00000592445 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
PRKCSH-216ENST00000592445 RCAN3Q9UKA8 241 aa23.13■■□□□ 1.29
PRKCSH-216ENST00000592445 PNMA2Q9UL42 364 aa23.13■■□□□ 1.29
PRKCSH-216ENST00000592445 SCN10AQ9Y5Y9 1956 aa23.12■■□□□ 1.29
PRKCSH-216ENST00000592445 B4DLN1 442 aa23.12■■□□□ 1.29
PRKCSH-216ENST00000592445 NOVP48745 357 aa23.12■■□□□ 1.29
PRKCSH-216ENST00000592445 MRPL12P52815 198 aaKnown RBP23.12■■□□□ 1.29
PRKCSH-216ENST00000592445 RPS6P62753 249 aaKnown RBP23.12■■□□□ 1.29
PRKCSH-216ENST00000592445 SPRED2Q7Z698 418 aa23.12■■□□□ 1.29
PRKCSH-216ENST00000592445 MIER1Q8N108 512 aa23.12■■□□□ 1.29
PRKCSH-216ENST00000592445 CLEC4DQ8WXI8 215 aa23.12■■□□□ 1.29
PRKCSH-216ENST00000592445 LPXNO60711 386 aa23.11■■□□□ 1.29
PRKCSH-216ENST00000592445 TOP1P11387 765 aaKnown RBP23.11■■□□□ 1.29
PRKCSH-216ENST00000592445 DNERQ8NFT8 737 aa23.11■■□□□ 1.29
PRKCSH-216ENST00000592445 CAGE1Q8TC20 777 aa23.11■■□□□ 1.29
PRKCSH-216ENST00000592445 AFAP1L1Q8TED9 768 aa23.11■■□□□ 1.29
PRKCSH-216ENST00000592445 TMEM47Q9BQJ4 181 aa23.11■■□□□ 1.29
PRKCSH-216ENST00000592445 TANC1Q9C0D5 1861 aa23.11■■□□□ 1.29
PRKCSH-216ENST00000592445 LCHNA4D1U4 455 aa23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 FOXP2O15409 715 aa23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 ORC4O43929 436 aa23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 EDNRBP24530 442 aa23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 WDR5P61964 334 aaKnown RBP23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 RRP12Q5JTH9 1297 aaKnown RBP23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 TMCO2Q7Z6W1 182 aaPredicted RBP23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 PI4K2BQ8TCG2 481 aa23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 GDPD5Q8WTR4 605 aa23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 LMCD1Q9NZU5 365 aa23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 ANAPC4Q9UJX5 808 aa23.1■■□□□ 1.29
PRKCSH-216ENST00000592445 FAM86C2PA6NEL3 165 aa23.09■■□□□ 1.29
PRKCSH-216ENST00000592445 GPR37L1O60883 481 aa23.09■■□□□ 1.29
PRKCSH-216ENST00000592445 KHSRPQ92945 711 aaKnown RBP eCLIP23.09■■□□□ 1.29
PRKCSH-216ENST00000592445 MTUS1Q9ULD2 1270 aa23.09■■□□□ 1.29
PRKCSH-216ENST00000592445 SELPP16109 830 aa23.08■■□□□ 1.29
PRKCSH-216ENST00000592445 LRRC8DQ7L1W4 858 aa23.08■■□□□ 1.29
PRKCSH-216ENST00000592445 AFG1LQ8WV93 481 aa23.08■■□□□ 1.29
PRKCSH-216ENST00000592445 ARIH2O95376 493 aa23.07■■□□□ 1.28
PRKCSH-216ENST00000592445 DEFB103AP81534 67 aa23.07■■□□□ 1.28
PRKCSH-216ENST00000592445 VPS53Q5VIR6 699 aa23.07■■□□□ 1.28
PRKCSH-216ENST00000592445 GDF6Q6KF10 455 aaPredicted RBP23.07■■□□□ 1.28
PRKCSH-216ENST00000592445 CNKSR3Q6P9H4 555 aa23.07■■□□□ 1.28
PRKCSH-216ENST00000592445 OTUD7AQ8TE49 926 aaPredicted RBP23.07■■□□□ 1.28
PRKCSH-216ENST00000592445 TET1Q8NFU7 2136 aa23.06■■□□□ 1.28
PRKCSH-216ENST00000592445 PDHBP11177 359 aa23.06■■□□□ 1.28
PRKCSH-216ENST00000592445 RAD9AQ99638 391 aa23.06■■□□□ 1.28
PRKCSH-216ENST00000592445 C11orf16Q9NQ32 467 aa23.06■■□□□ 1.28
PRKCSH-216ENST00000592445 COL4A4P53420 1690 aaPredicted RBP23.06■■□□□ 1.28
PRKCSH-216ENST00000592445 WDR19Q8NEZ3 1342 aa23.06■■□□□ 1.28
PRKCSH-216ENST00000592445 PARNO95453 639 aaKnown RBP23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 MMP3P08254 477 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 FGRP09769 529 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 ZNF543Q08ER8 600 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 GPNMBQ14956 572 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 USH1GQ495M9 461 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 SEPT14Q6ZU15 432 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 CHST3Q7LGC8 479 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 SESTD1Q86VW0 696 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 TGS1Q96RS0 853 aaKnown RBP23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 CTAGE1Q96RT6 745 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 CRBNQ96SW2 442 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 SUGCTQ9HAC7 445 aa23.05■■□□□ 1.28
PRKCSH-216ENST00000592445 PI4K2BG5E9Z4 385 aa23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 GJB5O95377 273 aa23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 GH1P01241 217 aa23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 MX1P20591 662 aa23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 CASTP20810 708 aaKnown RBP23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 LY6KQ17RY6 165 aa23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 CCDC62Q6P9F0 684 aa23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 DHX38Q92620 1227 aaKnown RBP23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 UBE2ZQ9H832 354 aaPredicted RBP23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 CD320Q9NPF0 282 aa23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 TCP11L1Q9NUJ3 509 aa23.04■■□□□ 1.28
PRKCSH-216ENST00000592445 TRIP12Q14669 1992 aaPredicted RBP23.03■■□□□ 1.28
PRKCSH-216ENST00000592445 ABHD14A-ACY1A0A1B0GW23 586 aa23.03■■□□□ 1.28
PRKCSH-216ENST00000592445 NBNO60934 754 aa23.03■■□□□ 1.28
PRKCSH-216ENST00000592445 CXCL10P02778 98 aa23.03■■□□□ 1.28
PRKCSH-216ENST00000592445 CKBP12277 381 aa23.03■■□□□ 1.28
PRKCSH-216ENST00000592445 ERVK-21P61565 698 aa23.03■■□□□ 1.28
PRKCSH-216ENST00000592445 ALX1Q15699 326 aa23.03■■□□□ 1.28
PRKCSH-216ENST00000592445 C7orf31Q8N865 590 aa23.03■■□□□ 1.28
PRKCSH-216ENST00000592445 KAT2BQ92831 832 aa23.03■■□□□ 1.28
PRKCSH-216ENST00000592445 PTPRSQ13332 1948 aa23.02■■□□□ 1.28
PRKCSH-216ENST00000592445 ARHGAP1Q07960 439 aa23.02■■□□□ 1.28
PRKCSH-216ENST00000592445 IKBKEQ14164 716 aa23.02■■□□□ 1.28
PRKCSH-216ENST00000592445 FAM117BQ6P1L5 589 aa23.02■■□□□ 1.28
PRKCSH-216ENST00000592445 RGS22Q8NE09 1264 aa23.02■■□□□ 1.28
PRKCSH-216ENST00000592445 GTF2IRD1Q9UHL9 959 aa23.02■■□□□ 1.28
PRKCSH-216ENST00000592445 LINC01553A4QN01 128 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms