RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 EDIL3O43854 480 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 KLRC4O43908 158 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 TDP2O95551 362 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 FGFR1OPO95684 399 aaKnown RBP11.65□□□□□ -0.54
VPS25-206ENST00000591584 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
VPS25-206ENST00000591584 CDC25AP30304 524 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 USP14P54578 494 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 JAG1P78504 1218 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 ARHGAP4P98171 946 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 RASA3Q14644 834 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 KMT5BQ4FZB7 885 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 TMEM119Q4V9L6 283 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 SPECC1LQ69YQ0 1117 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 UNC13DQ70J99 1090 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 FCHSD1Q86WN1 690 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 FAM114A1Q8IWE2 563 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 SNX29Q8TEQ0 813 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 NELFBQ8WX92 580 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 CRYGNQ8WXF5 182 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 LARP4BQ92615 738 aaKnown RBP11.65□□□□□ -0.54
VPS25-206ENST00000591584 SGIP1Q9BQI5 828 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 TMEM39BQ9GZU3 492 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 MAF1Q9H063 256 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 THAP9Q9H5L6 903 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 EXOC1Q9NV70 894 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 LIMA1Q9UHB6 759 aaKnown RBP11.65□□□□□ -0.54
VPS25-206ENST00000591584 PYCARDQ9ULZ3 195 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 BCS1LQ9Y276 419 aa11.65□□□□□ -0.54
VPS25-206ENST00000591584 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS25-206ENST00000591584 ITIH6Q6UXX5 1313 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
VPS25-206ENST00000591584 PP2D1A8MPX8 630 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 GCOM1H8Y6P7 765 aaPredicted RBP11.64□□□□□ -0.55
VPS25-206ENST00000591584 WDR46O15213 610 aaKnown RBP11.64□□□□□ -0.55
VPS25-206ENST00000591584 KIF20AO95235 890 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 TPM1P09493 284 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 POLR2MP0CAP2 368 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 SLURP2P0DP57 97 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 MUTP22033 750 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 EEF1GP26641 437 aaKnown RBP11.64□□□□□ -0.55
VPS25-206ENST00000591584 HOXD11P31277 338 aaPredicted RBP11.64□□□□□ -0.55
VPS25-206ENST00000591584 PRCPP42785 496 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 PDE4DQ08499 809 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 GRB10Q13322 594 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 TRIM14Q14142 442 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 KLHL10Q6JEL2 608 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 USP17L6PQ6QN14 398 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 MCF2L2Q86YR7 1114 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 RAD54LQ92698 747 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 STAMQ92783 540 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 HAS1Q92839 578 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
VPS25-206ENST00000591584 SAMSN1Q9NSI8 373 aaKnown RBP11.64□□□□□ -0.55
VPS25-206ENST00000591584 PAXBP1Q9Y5B6 917 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 PPP2R3BQ9Y5P8 575 aa11.64□□□□□ -0.55
VPS25-206ENST00000591584 PHF20L1A8MW92 1017 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 CCNE1P24864 410 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 CASP1P29466 404 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 ECE1P42892 770 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 ASIC1P78348 528 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 CCZ1BP86790 482 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 CCZ1P86791 482 aaPredicted RBP11.63□□□□□ -0.55
VPS25-206ENST00000591584 LRMPQ12912 555 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 TBX2Q13207 712 aaPredicted RBP11.63□□□□□ -0.55
VPS25-206ENST00000591584 FAM83BQ5T0W9 1011 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 MIGA2Q7L4E1 593 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 APOBEC3FQ8IUX4 373 aaKnown RBP11.63□□□□□ -0.55
VPS25-206ENST00000591584 PRPF38AQ8NAV1 312 aaKnown RBP11.63□□□□□ -0.55
VPS25-206ENST00000591584 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 IQCDQ96DY2 449 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 CCDC51Q96ER9 411 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 PNMA5Q96PV4 448 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 MED15Q96RN5 788 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 NUP88Q99567 741 aaPredicted RBP11.63□□□□□ -0.55
VPS25-206ENST00000591584 NAA15Q9BXJ9 866 aaKnown RBP11.63□□□□□ -0.55
VPS25-206ENST00000591584 KIAA1683Q9H0B3 1180 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 TMX1Q9H3N1 280 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 AS3MTQ9HBK9 375 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 BLOC1S4Q9NUP1 217 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 MAGEC2Q9UBF1 373 aaPredicted RBP11.63□□□□□ -0.55
VPS25-206ENST00000591584 ADD3Q9UEY8 706 aaKnown RBP11.63□□□□□ -0.55
VPS25-206ENST00000591584 CNOT7Q9UIV1 285 aaKnown RBP11.63□□□□□ -0.55
VPS25-206ENST00000591584 CTNND2Q9UQB3 1225 aa11.63□□□□□ -0.55
VPS25-206ENST00000591584 COL4A5P29400 1685 aa11.62□□□□□ -0.55
VPS25-206ENST00000591584 GOLGA6L9A6NEM1 432 aa11.62□□□□□ -0.55
VPS25-206ENST00000591584 ARHGAP6O43182 974 aa11.62□□□□□ -0.55
VPS25-206ENST00000591584 STX10O60499 249 aa11.62□□□□□ -0.55
VPS25-206ENST00000591584 ZNF76P36508 570 aa11.62□□□□□ -0.55
VPS25-206ENST00000591584 CCT6AP40227 531 aaKnown RBP11.62□□□□□ -0.55
VPS25-206ENST00000591584 PTGER2P43116 358 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms