RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 MOXD2PA6NHM9 499 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 ZBTB43O43298 467 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 ASGR1P07306 291 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 EIF2AK2P19525 551 aaKnown RBP25.86■■□□□ 1.73
MBD3-208ENST00000590830 RPS6KB1P23443 525 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 FUT2Q10981 343 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 TRAF1Q13077 416 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 TRIM60Q495X7 471 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 DUSP28Q4G0W2 176 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 C1orf53Q5VUE5 145 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 BLOC1S2Q6QNY1 142 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 TLK2Q86UE8 772 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 SPC25Q9HBM1 224 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 PXMP2Q9NR77 195 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 MAP3K20Q9NYL2 800 aaKnown RBP25.86■■□□□ 1.73
MBD3-208ENST00000590830 ATP11BQ9Y2G3 1177 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 Q9Y3F1 56 aa25.86■■□□□ 1.73
MBD3-208ENST00000590830 APOBRQ0VD83 1088 aa25.85■■□□□ 1.73
MBD3-208ENST00000590830 ARHGEF16Q5VV41 709 aa25.85■■□□□ 1.73
MBD3-208ENST00000590830 SAMD3Q8N6K7 520 aa25.85■■□□□ 1.73
MBD3-208ENST00000590830 IWS1Q96ST2 819 aa25.85■■□□□ 1.73
MBD3-208ENST00000590830 MPHOSPH6Q99547 160 aaKnown RBP25.85■■□□□ 1.73
MBD3-208ENST00000590830 AP5M1Q9H0R1 490 aa25.85■■□□□ 1.73
MBD3-208ENST00000590830 B4DLN1 442 aa25.84■■□□□ 1.73
MBD3-208ENST00000590830 GCOM1H8Y6P7 765 aaPredicted RBP25.84■■□□□ 1.73
MBD3-208ENST00000590830 POLR2MP0CAP2 368 aa25.84■■□□□ 1.73
MBD3-208ENST00000590830 MRPL12P52815 198 aaKnown RBP25.84■■□□□ 1.73
MBD3-208ENST00000590830 FBXL16Q8N461 479 aa25.84■■□□□ 1.73
MBD3-208ENST00000590830 PCSK9Q8NBP7 692 aaKnown RBP25.84■■□□□ 1.73
MBD3-208ENST00000590830 ARIH2O95376 493 aa25.83■■□□□ 1.73
MBD3-208ENST00000590830 NR3C2P08235 984 aa25.83■■□□□ 1.73
MBD3-208ENST00000590830 CASTP20810 708 aaKnown RBP25.83■■□□□ 1.73
MBD3-208ENST00000590830 CDC27P30260 824 aa25.83■■□□□ 1.73
MBD3-208ENST00000590830 FSCN1Q16658 493 aaKnown RBP25.83■■□□□ 1.73
MBD3-208ENST00000590830 RTN1Q16799 776 aa25.83■■□□□ 1.73
MBD3-208ENST00000590830 COPS5Q92905 334 aa25.83■■□□□ 1.73
MBD3-208ENST00000590830 BRF1Q92994 677 aa25.83■■□□□ 1.73
MBD3-208ENST00000590830 PDCD2LQ9BRP1 358 aa25.83■■□□□ 1.73
MBD3-208ENST00000590830 AGXT2Q9BYV1 514 aa25.83■■□□□ 1.73
MBD3-208ENST00000590830 ZSWIM6Q9HCJ5 1215 aa25.83■■□□□ 1.73
MBD3-208ENST00000590830 RBM27Q9P2N5 1060 aaKnown RBP25.83■■□□□ 1.73
MBD3-208ENST00000590830 RANBP2P49792 3224 aaKnown RBP25.82■■□□□ 1.72
MBD3-208ENST00000590830 PSMA5P28066 241 aa25.82■■□□□ 1.72
MBD3-208ENST00000590830 TLE2Q04725 743 aa25.82■■□□□ 1.72
MBD3-208ENST00000590830 STXBP2Q15833 593 aa25.82■■□□□ 1.72
MBD3-208ENST00000590830 HABP4Q5JVS0 413 aaKnown RBP25.82■■□□□ 1.72
MBD3-208ENST00000590830 CCDC62Q6P9F0 684 aa25.82■■□□□ 1.72
MBD3-208ENST00000590830 FCHSD1Q86WN1 690 aa25.82■■□□□ 1.72
MBD3-208ENST00000590830 IL31RAQ8NI17 732 aa25.82■■□□□ 1.72
MBD3-208ENST00000590830 SCFD2Q8WU76 684 aa25.82■■□□□ 1.72
MBD3-208ENST00000590830 STARD7Q9NQZ5 370 aa25.82■■□□□ 1.72
MBD3-208ENST00000590830 RBM28Q9NW13 759 aaKnown RBP25.82■■□□□ 1.72
MBD3-208ENST00000590830 SEC63Q9UGP8 760 aaKnown RBP25.82■■□□□ 1.72
MBD3-208ENST00000590830 GOLGA8AA7E2F4 631 aa25.81■■□□□ 1.72
MBD3-208ENST00000590830 GOLGA8BA8MQT2 603 aa25.81■■□□□ 1.72
MBD3-208ENST00000590830 FGD1P98174 961 aa25.81■■□□□ 1.72
MBD3-208ENST00000590830 CXCL17Q6UXB2 119 aa25.81■■□□□ 1.72
MBD3-208ENST00000590830 SEPT14Q6ZU15 432 aa25.81■■□□□ 1.72
MBD3-208ENST00000590830 GDF15Q99988 308 aa25.81■■□□□ 1.72
MBD3-208ENST00000590830 CNTNAP5Q8WYK1 1306 aa25.81■■□□□ 1.72
MBD3-208ENST00000590830 EIF3JO75822 258 aaKnown RBP25.8■■□□□ 1.72
MBD3-208ENST00000590830 TXNP10599 105 aaKnown RBP25.8■■□□□ 1.72
MBD3-208ENST00000590830 ADD1P35611 737 aaKnown RBP25.8■■□□□ 1.72
MBD3-208ENST00000590830 CDK7P50613 346 aa25.8■■□□□ 1.72
MBD3-208ENST00000590830 USP17L6PQ6QN14 398 aa25.8■■□□□ 1.72
MBD3-208ENST00000590830 RUFY3Q7L099 469 aa25.8■■□□□ 1.72
MBD3-208ENST00000590830 VSIG10LQ86VR7 867 aa25.8■■□□□ 1.72
MBD3-208ENST00000590830 GLT1D1Q96MS3 346 aa25.8■■□□□ 1.72
MBD3-208ENST00000590830 ELP1O95163 1332 aa25.8■■□□□ 1.72
MBD3-208ENST00000590830 MEIS2O14770 477 aa25.79■■□□□ 1.72
MBD3-208ENST00000590830 RGS20O76081 388 aa25.79■■□□□ 1.72
MBD3-208ENST00000590830 MYCLP12524 364 aaPredicted RBP25.79■■□□□ 1.72
MBD3-208ENST00000590830 MAGEA10P43363 369 aaPredicted RBP25.79■■□□□ 1.72
MBD3-208ENST00000590830 RCAN1P53805 252 aa25.79■■□□□ 1.72
MBD3-208ENST00000590830 PGM5Q15124 567 aa25.79■■□□□ 1.72
MBD3-208ENST00000590830 PPP2R5BQ15173 497 aa25.79■■□□□ 1.72
MBD3-208ENST00000590830 LY6KQ17RY6 165 aa25.79■■□□□ 1.72
MBD3-208ENST00000590830 SH3RF1Q7Z6J0 888 aa25.79■■□□□ 1.72
MBD3-208ENST00000590830 OR6J1Q8NGC5 347 aa25.79■■□□□ 1.72
MBD3-208ENST00000590830 ZFP91Q96JP5 570 aaPredicted RBP25.79■■□□□ 1.72
MBD3-208ENST00000590830 NAP1L2Q9ULW6 460 aaPredicted RBP25.79■■□□□ 1.72
MBD3-208ENST00000590830 V9GY48 417 aaPredicted RBP25.79■■□□□ 1.72
MBD3-208ENST00000590830 TTLL4Q14679 1199 aa25.78■■□□□ 1.72
MBD3-208ENST00000590830 GPKOWQ92917 476 aaPredicted RBP eCLIP25.78■■□□□ 1.72
MBD3-208ENST00000590830 TM6SF1Q9BZW5 370 aa25.78■■□□□ 1.72
MBD3-208ENST00000590830 PDLIM7Q9NR12 457 aa25.78■■□□□ 1.72
MBD3-208ENST00000590830 GRIN2DO15399 1336 aa25.78■■□□□ 1.72
MBD3-208ENST00000590830 TRIM43BA6NCK2 446 aa25.77■■□□□ 1.72
MBD3-208ENST00000590830 PIK3CDO00329 1044 aa25.77■■□□□ 1.72
MBD3-208ENST00000590830 NKRFO15226 690 aaKnown RBP eCLIP25.77■■□□□ 1.72
MBD3-208ENST00000590830 EVCP57679 992 aa25.77■■□□□ 1.72
MBD3-208ENST00000590830 TOB2Q14106 344 aaPredicted RBP25.77■■□□□ 1.72
MBD3-208ENST00000590830 ANKRD33Q7Z3H0 272 aa25.77■■□□□ 1.72
MBD3-208ENST00000590830 VTI1AQ96AJ9 217 aa25.77■■□□□ 1.72
MBD3-208ENST00000590830 TRIM43Q96BQ3 446 aaPredicted RBP25.77■■□□□ 1.72
MBD3-208ENST00000590830 UPF3BQ9BZI7 483 aaKnown RBP25.77■■□□□ 1.72
MBD3-208ENST00000590830 DDX41Q9UJV9 622 aaKnown RBP25.77■■□□□ 1.72
MBD3-208ENST00000590830 PQBP1O60828 265 aaKnown RBP25.76■■□□□ 1.71
MBD3-208ENST00000590830 SEC24BO95487 1268 aa25.76■■□□□ 1.71
MBD3-208ENST00000590830 METAP2P50579 478 aaKnown RBP eCLIP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms