RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 POLR2MP0CAP2 368 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 EDNRBP24530 442 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 HOXA13P31271 388 aaPredicted RBP13.98□□□□□ -0.17
TPM4-212ENST00000590180 HSPA4P34932 840 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 MAGEA10P43363 369 aaPredicted RBP13.98□□□□□ -0.17
TPM4-212ENST00000590180 SNX17Q15036 470 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 STXBP2Q15833 593 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 C1orf53Q5VUE5 145 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 SEPT14Q6ZU15 432 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 FCHSD1Q86WN1 690 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 MICU3Q86XE3 530 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 SRBD1Q8N5C6 995 aaKnown RBP13.98□□□□□ -0.17
TPM4-212ENST00000590180 SCFD2Q8WU76 684 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 JAKMIP1Q96N16 626 aaKnown RBP13.98□□□□□ -0.17
TPM4-212ENST00000590180 IWS1Q96ST2 819 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 SPZ1Q9BXG8 430 aa13.98□□□□□ -0.17
TPM4-212ENST00000590180 MAP3K20Q9NYL2 800 aaKnown RBP13.98□□□□□ -0.17
TPM4-212ENST00000590180 SEC63Q9UGP8 760 aaKnown RBP13.98□□□□□ -0.17
TPM4-212ENST00000590180 FRMPD3Q5JV73 1810 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 ELP1O95163 1332 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 DCDC2CA8MYV0 355 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 OPLAHO14841 1288 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 CTAGE5O15320 804 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 NR3C2P08235 984 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 TXNP10599 105 aaKnown RBP13.97□□□□□ -0.17
TPM4-212ENST00000590180 MYCLP12524 364 aaPredicted RBP13.97□□□□□ -0.17
TPM4-212ENST00000590180 CPA1P15085 419 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 HSD17B4P51659 736 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 TTLL4Q14679 1199 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 CXCL17Q6UXB2 119 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 SGMS1Q86VZ5 419 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 SAMD3Q8N6K7 520 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 OR6J1Q8NGC5 347 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 KCNB2Q92953 911 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 GDF15Q99988 308 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 UBE2OQ9C0C9 1292 aaKnown RBP13.97□□□□□ -0.17
TPM4-212ENST00000590180 SNX14Q9Y5W7 946 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 ALPK3Q96L96 1907 aa13.97□□□□□ -0.17
TPM4-212ENST00000590180 hCG_1642624A0A1W2PR95 340 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 ZBTB43O43298 467 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.17
TPM4-212ENST00000590180 NKX3-2P78367 333 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 PPP2R5BQ15173 497 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 BRDTQ58F21 947 aaPredicted RBP13.96□□□□□ -0.17
TPM4-212ENST00000590180 BLOC1S2Q6QNY1 142 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 SH3RF1Q7Z6J0 888 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 COPS5Q92905 334 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 PRO3102Q9H379 93 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 PXMP2Q9NR77 195 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 TMEM39AQ9NV64 488 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 BRPF3Q9ULD4 1205 aa13.96□□□□□ -0.17
TPM4-212ENST00000590180 MYH6P13533 1939 aa13.96□□□□□ -0.18
TPM4-212ENST00000590180 A0A0U1RQG5 324 aaPredicted RBP13.95□□□□□ -0.18
TPM4-212ENST00000590180 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 ARVCFO00192 962 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 NKRFO15226 690 aaKnown RBP eCLIP13.95□□□□□ -0.18
TPM4-212ENST00000590180 CABYRO75952 493 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 MYL3P08590 195 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 CLTBP09497 229 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 PSMA5P28066 241 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 BMP8BP34820 402 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 RTN1Q16799 776 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 APOA5Q6Q788 366 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 Q6ZUG5 572 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 TMTC3Q6ZXV5 915 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 SMARCC2Q8TAQ2 1214 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 CUL5Q93034 780 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 TOX2Q96NM4 488 aa13.95□□□□□ -0.18
TPM4-212ENST00000590180 RBM28Q9NW13 759 aaKnown RBP13.95□□□□□ -0.18
TPM4-212ENST00000590180 TRIM43BA6NCK2 446 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 ARIH2O95376 493 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 CPT1AP50416 773 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 CDK7P50613 346 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 GHRHRQ02643 423 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 APOBRQ0VD83 1088 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 LY6KQ17RY6 165 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 ANKRD33Q7Z3H0 272 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 VSIG10LQ86VR7 867 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 BADQ92934 168 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 TRIM43Q96BQ3 446 aaPredicted RBP13.94□□□□□ -0.18
TPM4-212ENST00000590180 ZFP91Q96JP5 570 aaPredicted RBP13.94□□□□□ -0.18
TPM4-212ENST00000590180 PDCD2LQ9BRP1 358 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 USP26Q9BXU7 913 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 PDLIM7Q9NR12 457 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 POLR3EQ9NVU0 708 aa13.94□□□□□ -0.18
TPM4-212ENST00000590180 GOLGA8AA7E2F4 631 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 GOLGA8BA8MQT2 603 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 TLR3O15455 904 aaKnown RBP13.93□□□□□ -0.18
TPM4-212ENST00000590180 GH1P01241 217 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 RAG1P15918 1043 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 CASTP20810 708 aaKnown RBP13.93□□□□□ -0.18
TPM4-212ENST00000590180 CHMP4BP1P59074 171 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 PSMC6P62333 389 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 FAAP100Q0VG06 881 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 ITGA7Q13683 1181 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 PGM5Q15124 567 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 CCDC62Q6P9F0 684 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 USP17L6PQ6QN14 398 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 BRF1Q92994 677 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 PSTPIP2Q9H939 334 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms