RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 CRBNQ96SW2 442 aa7.36□□□□□ -1.23
VPS25-204ENST00000589577 MTG1Q9BT17 334 aaPredicted RBP7.36□□□□□ -1.23
VPS25-204ENST00000589577 ANTXR1Q9H6X2 564 aa7.36□□□□□ -1.23
VPS25-204ENST00000589577 SLC38A10Q9HBR0 1119 aa7.36□□□□□ -1.23
VPS25-204ENST00000589577 GOPCQ9HD26 462 aa7.36□□□□□ -1.23
VPS25-204ENST00000589577 DCP1AQ9NPI6 582 aaPredicted RBP7.36□□□□□ -1.23
VPS25-204ENST00000589577 HOMER2Q9NSB8 354 aa7.36□□□□□ -1.23
VPS25-204ENST00000589577 POLR3EQ9NVU0 708 aa7.36□□□□□ -1.23
VPS25-204ENST00000589577 TLR7Q9NYK1 1049 aaKnown RBP7.36□□□□□ -1.23
VPS25-204ENST00000589577 CD207Q9UJ71 328 aa7.36□□□□□ -1.23
VPS25-204ENST00000589577 RALYQ9UKM9 306 aaKnown RBP7.36□□□□□ -1.23
VPS25-204ENST00000589577 FRYQ5TBA9 3013 aa7.36□□□□□ -1.23
VPS25-204ENST00000589577 MYO10Q9HD67 2058 aa7.36□□□□□ -1.23
VPS25-204ENST00000589577 CYP2D7A0A087X1C5 515 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 ASB14A6NK59 587 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 GRM6O15303 877 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 NCK2O43639 380 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 RAD21O60216 631 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 LGR5O75473 907 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 COL9A2Q14055 689 aaPredicted RBP7.35□□□□□ -1.23
VPS25-204ENST00000589577 PTGISQ16647 500 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 TNNI3KQ59H18 835 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 GDF6Q6KF10 455 aaPredicted RBP7.35□□□□□ -1.23
VPS25-204ENST00000589577 TMEM192Q8IY95 271 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 PRPF38AQ8NAV1 312 aaKnown RBP7.35□□□□□ -1.23
VPS25-204ENST00000589577 SMRP1Q8NCR6 262 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 CAGE1Q8TC20 777 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 MORC4Q8TE76 937 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 WNT8BQ93098 351 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 SAMD11Q96NU1 681 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 PURBQ96QR8 312 aaKnown RBP7.35□□□□□ -1.23
VPS25-204ENST00000589577 CLEC1BQ9P126 229 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 SWAP70Q9UH65 585 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 FBXO40Q9UH90 709 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 FPGT-TNNI3KV9GXZ4 949 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 FANCMQ8IYD8 2048 aa7.35□□□□□ -1.23
VPS25-204ENST00000589577 PLXNA4Q9HCM2 1894 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 PNMA6EA0A0J9YXQ4 647 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 E9PSI1 815 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 NDUFB10O96000 172 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 ARP10275 920 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 CKBP12277 381 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 ICAM3P32942 547 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 CDK8P49336 464 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 CPT1AP50416 773 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 RRP1P56182 461 aaKnown RBP7.34□□□□□ -1.23
VPS25-204ENST00000589577 PTPN11Q06124 597 aaPredicted RBP7.34□□□□□ -1.23
VPS25-204ENST00000589577 ADAM15Q13444 863 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 IKBKEQ14164 716 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 PTPN21Q16825 1174 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 KIAA1211Q6ZU35 1233 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 KIFC2Q96AC6 838 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 CCDC17Q96LX7 622 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 RIPOR3Q96MK2 946 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 KANSL2Q9H9L4 492 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 VTA1Q9NP79 307 aa7.34□□□□□ -1.23
VPS25-204ENST00000589577 DBNLQ9UJU6 430 aaKnown RBP7.34□□□□□ -1.23
VPS25-204ENST00000589577 ZFYVE26Q68DK2 2539 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 MAGEB6P1A0A0J9YX57 407 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 RBM47A0AV96 593 aaKnown RBP7.33□□□□□ -1.24
VPS25-204ENST00000589577 A6NJR5 290 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 USP17L12C9JPN9 530 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 USP17L21D6R901 530 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 C5orf67F2Z3F1 127 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 F5H6K3 240 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 EFCAB14O75071 495 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 ZBED4O75132 1171 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 GLP2RO95838 553 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 OAZ1P54368 228 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 KLRC3Q07444 240 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 COASYQ13057 564 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 CAMK1Q14012 370 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 TRIM71Q2Q1W2 868 aaKnown RBP7.33□□□□□ -1.24
VPS25-204ENST00000589577 CCDC158Q5M9N0 1113 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 MCTP2Q6DN12 878 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 C16orf86Q6ZW13 317 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 MYOCDQ8IZQ8 938 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 LCORLQ8N3X6 602 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 CCDC155Q8N6L0 562 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 WDR11Q9BZH6 1224 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 CRNKL1Q9BZJ0 848 aaKnown RBP7.33□□□□□ -1.24
VPS25-204ENST00000589577 ACAD9Q9H845 621 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 GPR108Q9NPR9 543 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 INCENPQ9NQS7 918 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 RNF146Q9NTX7 359 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 RNF216Q9NWF9 866 aaPredicted RBP7.33□□□□□ -1.24
VPS25-204ENST00000589577 DLL3Q9NYJ7 618 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 CYP39A1Q9NYL5 469 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 NOD1Q9Y239 953 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 COG6Q9Y2V7 657 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 USP15Q9Y4E8 981 aaPredicted RBP7.33□□□□□ -1.24
VPS25-204ENST00000589577 MYH7P12883 1935 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 KIAA1217Q5T5P2 1943 aa7.33□□□□□ -1.24
VPS25-204ENST00000589577 TCRBV5S4A2TA0A5A2 114 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 PRKAB2O43741 272 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 CSPG5O95196 566 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 PARNO95453 639 aaKnown RBP7.32□□□□□ -1.24
VPS25-204ENST00000589577 PUM1Q14671 1186 aaKnown RBP eCLIP7.32□□□□□ -1.24
VPS25-204ENST00000589577 ST3GAL2Q16842 350 aa7.32□□□□□ -1.24
VPS25-204ENST00000589577 MUM1L1Q5H9M0 696 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms