RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 OPLAHO14841 1288 aa22.27■■□□□ 1.16
CIRBP-221ENST00000589161 MDM2Q00987 491 aaPredicted RBP22.27■■□□□ 1.16
CIRBP-221ENST00000589161 COL9A3Q14050 684 aaPredicted RBP22.27■■□□□ 1.16
CIRBP-221ENST00000589161 STXBP2Q15833 593 aa22.27■■□□□ 1.16
CIRBP-221ENST00000589161 SYNE3Q6ZMZ3 975 aa22.27■■□□□ 1.16
CIRBP-221ENST00000589161 DHX32Q7L7V1 743 aaKnown RBP22.27■■□□□ 1.16
CIRBP-221ENST00000589161 ANKRD33Q7Z3H0 272 aa22.27■■□□□ 1.16
CIRBP-221ENST00000589161 SGMS1Q86VZ5 419 aa22.27■■□□□ 1.16
CIRBP-221ENST00000589161 RASEFQ8IZ41 740 aa22.27■■□□□ 1.16
CIRBP-221ENST00000589161 RRP36Q96EU6 259 aaKnown RBP22.27■■□□□ 1.16
CIRBP-221ENST00000589161 LRRC2Q9BYS8 371 aa22.27■■□□□ 1.16
CIRBP-221ENST00000589161 PDLIM7Q9NR12 457 aa22.27■■□□□ 1.16
CIRBP-221ENST00000589161 MROH7Q68CQ1 1323 aa22.27■■□□□ 1.16
CIRBP-221ENST00000589161 PQBP1O60828 265 aaKnown RBP22.26■■□□□ 1.15
CIRBP-221ENST00000589161 HMGB1P09429 215 aaKnown RBP22.26■■□□□ 1.15
CIRBP-221ENST00000589161 CLTBP09497 229 aa22.26■■□□□ 1.15
CIRBP-221ENST00000589161 EXOSC10Q01780 885 aaKnown RBP22.26■■□□□ 1.15
CIRBP-221ENST00000589161 PPP2R5BQ15173 497 aa22.26■■□□□ 1.15
CIRBP-221ENST00000589161 TMEM63BQ5T3F8 832 aa22.26■■□□□ 1.15
CIRBP-221ENST00000589161 GCOM1H8Y6P7 765 aaPredicted RBP22.25■■□□□ 1.15
CIRBP-221ENST00000589161 ARVCFO00192 962 aa22.25■■□□□ 1.15
CIRBP-221ENST00000589161 REC8O95072 547 aa22.25■■□□□ 1.15
CIRBP-221ENST00000589161 POLR2MP0CAP2 368 aa22.25■■□□□ 1.15
CIRBP-221ENST00000589161 CDK7P50613 346 aa22.25■■□□□ 1.15
CIRBP-221ENST00000589161 TTLL4Q14679 1199 aa22.25■■□□□ 1.15
CIRBP-221ENST00000589161 FANCBQ8NB91 859 aa22.25■■□□□ 1.15
CIRBP-221ENST00000589161 SEZ6LQ9BYH1 1024 aa22.25■■□□□ 1.15
CIRBP-221ENST00000589161 PXMP2Q9NR77 195 aa22.25■■□□□ 1.15
CIRBP-221ENST00000589161 SEC63Q9UGP8 760 aaKnown RBP22.25■■□□□ 1.15
CIRBP-221ENST00000589161 TRIOBPQ9H2D6 2365 aa22.25■■□□□ 1.15
CIRBP-221ENST00000589161 DNAH12Q6ZR08 3092 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 TRIM43BA6NCK2 446 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 EIF3JO75822 258 aaKnown RBP22.24■■□□□ 1.15
CIRBP-221ENST00000589161 TXNP10599 105 aaKnown RBP22.24■■□□□ 1.15
CIRBP-221ENST00000589161 EIF2AK2P19525 551 aaKnown RBP22.24■■□□□ 1.15
CIRBP-221ENST00000589161 PTGS1P23219 599 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 CPT1AP50416 773 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 ADCK5Q3MIX3 580 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 BRDTQ58F21 947 aaPredicted RBP22.24■■□□□ 1.15
CIRBP-221ENST00000589161 CXCL17Q6UXB2 119 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 TDHQ8IZJ6 230 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 OR6J1Q8NGC5 347 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 PIBF1Q8WXW3 757 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 KCNB2Q92953 911 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 TRIM43Q96BQ3 446 aaPredicted RBP22.24■■□□□ 1.15
CIRBP-221ENST00000589161 TMEM39AQ9NV64 488 aa22.24■■□□□ 1.15
CIRBP-221ENST00000589161 LRRC37A2A6NM11 1700 aa22.23■■□□□ 1.15
CIRBP-221ENST00000589161 NR3C2P08235 984 aa22.23■■□□□ 1.15
CIRBP-221ENST00000589161 HSPA4P34932 840 aa22.23■■□□□ 1.15
CIRBP-221ENST00000589161 SH3RF1Q7Z6J0 888 aa22.23■■□□□ 1.15
CIRBP-221ENST00000589161 SRBD1Q8N5C6 995 aaKnown RBP22.23■■□□□ 1.15
CIRBP-221ENST00000589161 POLR3EQ9NVU0 708 aa22.23■■□□□ 1.15
CIRBP-221ENST00000589161 KIAA0355O15063 1070 aa22.22■■□□□ 1.15
CIRBP-221ENST00000589161 PLEKHA8P1O95397 391 aa22.22■■□□□ 1.15
CIRBP-221ENST00000589161 RXRAP19793 462 aa22.22■■□□□ 1.15
CIRBP-221ENST00000589161 HOXA13P31271 388 aaPredicted RBP22.22■■□□□ 1.15
CIRBP-221ENST00000589161 FAAP100Q0VG06 881 aa22.22■■□□□ 1.15
CIRBP-221ENST00000589161 SEPT14Q6ZU15 432 aa22.22■■□□□ 1.15
CIRBP-221ENST00000589161 MYH6P13533 1939 aa22.21■■□□□ 1.15
CIRBP-221ENST00000589161 TLR3O15455 904 aaKnown RBP22.21■■□□□ 1.15
CIRBP-221ENST00000589161 RAG1P15918 1043 aa22.21■■□□□ 1.15
CIRBP-221ENST00000589161 ITGA7Q13683 1181 aa22.21■■□□□ 1.15
CIRBP-221ENST00000589161 CCDC62Q6P9F0 684 aa22.21■■□□□ 1.15
CIRBP-221ENST00000589161 MICU3Q86XE3 530 aa22.21■■□□□ 1.15
CIRBP-221ENST00000589161 SLC43A3Q8NBI5 491 aa22.21■■□□□ 1.15
CIRBP-221ENST00000589161 BADQ92934 168 aa22.21■■□□□ 1.15
CIRBP-221ENST00000589161 PDCD2LQ9BRP1 358 aa22.21■■□□□ 1.15
CIRBP-221ENST00000589161 RBM28Q9NW13 759 aaKnown RBP22.21■■□□□ 1.15
CIRBP-221ENST00000589161 PCDH10Q9P2E7 1040 aa22.21■■□□□ 1.15
CIRBP-221ENST00000589161 RANBP2P49792 3224 aaKnown RBP22.21■■□□□ 1.15
CIRBP-221ENST00000589161 EPB41L2O43491 1005 aaKnown RBP22.2■■□□□ 1.14
CIRBP-221ENST00000589161 KPNA6O60684 536 aa22.2■■□□□ 1.14
CIRBP-221ENST00000589161 APOA5Q6Q788 366 aa22.2■■□□□ 1.14
CIRBP-221ENST00000589161 TMTC3Q6ZXV5 915 aa22.2■■□□□ 1.14
CIRBP-221ENST00000589161 FCHSD1Q86WN1 690 aa22.2■■□□□ 1.14
CIRBP-221ENST00000589161 RAB11FIP4Q86YS3 637 aa22.2■■□□□ 1.14
CIRBP-221ENST00000589161 CMTR1Q8N1G2 835 aaKnown RBP22.2■■□□□ 1.14
CIRBP-221ENST00000589161 TCEANC2Q96MN5 208 aa22.2■■□□□ 1.14
CIRBP-221ENST00000589161 BAZ2BQ9UIF8 2168 aaKnown RBP22.19■■□□□ 1.14
CIRBP-221ENST00000589161 A6NJR5 290 aa22.19■■□□□ 1.14
CIRBP-221ENST00000589161 ARIH2O95376 493 aa22.19■■□□□ 1.14
CIRBP-221ENST00000589161 MYCLP12524 364 aaPredicted RBP22.19■■□□□ 1.14
CIRBP-221ENST00000589161 FGD1P98174 961 aa22.19■■□□□ 1.14
CIRBP-221ENST00000589161 PGM5Q15124 567 aa22.19■■□□□ 1.14
CIRBP-221ENST00000589161 LRIT3Q3SXY7 679 aa22.19■■□□□ 1.14
CIRBP-221ENST00000589161 VSIG10LQ86VR7 867 aa22.19■■□□□ 1.14
CIRBP-221ENST00000589161 COPS5Q92905 334 aa22.19■■□□□ 1.14
CIRBP-221ENST00000589161 CUL5Q93034 780 aa22.19■■□□□ 1.14
CIRBP-221ENST00000589161 SNX14Q9Y5W7 946 aa22.19■■□□□ 1.14
CIRBP-221ENST00000589161 ZBTB43O43298 467 aa22.18■■□□□ 1.14
CIRBP-221ENST00000589161 GH1P01241 217 aa22.18■■□□□ 1.14
CIRBP-221ENST00000589161 MYL3P08590 195 aa22.18■■□□□ 1.14
CIRBP-221ENST00000589161 PSMA5P28066 241 aa22.18■■□□□ 1.14
CIRBP-221ENST00000589161 PURAQ00577 322 aaKnown RBP22.18■■□□□ 1.14
CIRBP-221ENST00000589161 LY6KQ17RY6 165 aa22.18■■□□□ 1.14
CIRBP-221ENST00000589161 KCNV1Q6PIU1 500 aa22.18■■□□□ 1.14
CIRBP-221ENST00000589161 BLOC1S2Q6QNY1 142 aa22.18■■□□□ 1.14
CIRBP-221ENST00000589161 FAM126BQ8IXS8 530 aa22.18■■□□□ 1.14
CIRBP-221ENST00000589161 CCDC82Q8N4S0 544 aa22.18■■□□□ 1.14
CIRBP-221ENST00000589161 JAKMIP1Q96N16 626 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms