RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 CCPG1Q9ULG6 757 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 ZNF536O15090 1300 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 MYPNQ86TC9 1320 aa13.65□□□□□ -0.22
CCBE1-203ENST00000589116 SMCHD1A6NHR9 2005 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 LOC285556D6RIA3 1793 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
CCBE1-203ENST00000589116 ZBED4O75132 1171 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 FXR2P51116 673 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCBE1-203ENST00000589116 HMGCS2P54868 508 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 SOX10P56693 466 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 ARHGAP4P98171 946 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 GHRHRQ02643 423 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 PRKG1Q13976 671 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 ANO6Q4KMQ2 910 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 CEP57L1Q8IYX8 460 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 ANKRD13AQ8IZ07 590 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 PDILTQ8N807 584 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 IQUBQ8NA54 791 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 DDX25Q9UHL0 483 aaKnown RBP13.64□□□□□ -0.23
CCBE1-203ENST00000589116 SERTAD1Q9UHV2 236 aa13.64□□□□□ -0.23
CCBE1-203ENST00000589116 CTDP1Q9Y5B0 961 aaPredicted RBP13.64□□□□□ -0.23
CCBE1-203ENST00000589116 SLC37A4O43826 429 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 CYP3A4P08684 503 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 CIITAP33076 1130 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 OAZ1P54368 228 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 POSTNQ15063 836 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 E2F4Q16254 413 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
CCBE1-203ENST00000589116 MCF2L2Q86YR7 1114 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 IGSF22Q8N9C0 903 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 DHX58Q96C10 678 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 MAP3K20Q9NYL2 800 aaKnown RBP13.63□□□□□ -0.23
CCBE1-203ENST00000589116 A0A087X0B3 334 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 AOC2O75106 756 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 CFBP00751 764 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 MAP2K2P36507 400 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 UBA7P41226 1012 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 HSD17B4P51659 736 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
CCBE1-203ENST00000589116 PPATQ06203 517 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 SH3RF1Q7Z6J0 888 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 ERO1BQ86YB8 467 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 P2RX7Q99572 595 aaKnown RBP13.63□□□□□ -0.23
CCBE1-203ENST00000589116 PANK2Q9BZ23 570 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 NAT10Q9H0A0 1025 aaKnown RBP13.63□□□□□ -0.23
CCBE1-203ENST00000589116 DISC1Q9NRI5 854 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 RABGAP1Q9Y3P9 1069 aa13.63□□□□□ -0.23
CCBE1-203ENST00000589116 COL11A1P12107 1806 aaPredicted RBP13.62□□□□□ -0.23
CCBE1-203ENST00000589116 VWA5AO00534 786 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 TBX3O15119 743 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 TAL1P17542 331 aaPredicted RBP13.62□□□□□ -0.23
CCBE1-203ENST00000589116 HOXA13P31271 388 aaPredicted RBP13.62□□□□□ -0.23
CCBE1-203ENST00000589116 DSG3P32926 999 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 ZNF165P49910 485 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 NLRP12P59046 1061 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 PNOCQ13519 176 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 PDIA5Q14554 519 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 COG2Q14746 738 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 Q4G0T1 1027 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 NT5DC1Q5TFE4 455 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 DLK2Q6UY11 383 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 CATSPERGQ6ZRH7 1159 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 ARMC9Q7Z3E5 817 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 AGBL1Q96MI9 1066 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 MAF1Q9H063 256 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 DNAJC25Q9H1X3 360 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 CUEDC2Q9H467 287 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 MAGEF1Q9HAY2 307 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 ADAMTS5Q9UNA0 930 aa13.62□□□□□ -0.23
CCBE1-203ENST00000589116 SPDYE5A6NIY4 337 aa13.61□□□□□ -0.23
CCBE1-203ENST00000589116 UNCXA6NJT0 531 aa13.61□□□□□ -0.23
CCBE1-203ENST00000589116 TXKP42681 527 aa13.61□□□□□ -0.23
CCBE1-203ENST00000589116 SLFN12Q8IYM2 578 aa13.61□□□□□ -0.23
CCBE1-203ENST00000589116 TRIML1Q8N9V2 468 aa13.61□□□□□ -0.23
CCBE1-203ENST00000589116 ERCC4Q92889 916 aaPredicted RBP13.61□□□□□ -0.23
CCBE1-203ENST00000589116 ATG4CQ96DT6 458 aa13.61□□□□□ -0.23
CCBE1-203ENST00000589116 KCNMB3Q9NPA1 279 aa13.61□□□□□ -0.23
CCBE1-203ENST00000589116 CASP8AP2Q9UKL3 1982 aa13.61□□□□□ -0.23
CCBE1-203ENST00000589116 A0A0G2JMZ2 1700 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 CXCL11O14625 94 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 ATP2A1O14983 1001 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 SLC26A4O43511 780 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 SMC2O95347 1197 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 STAT6P42226 847 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 TECP42680 631 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 CCDC173Q0VFZ6 552 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 TTLL12Q14166 644 aaPredicted RBP13.6□□□□□ -0.23
CCBE1-203ENST00000589116 PDXDC2PQ6P474 469 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 CABP7Q86V35 215 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 PROCA1Q8NCQ7 364 aaPredicted RBP13.6□□□□□ -0.23
CCBE1-203ENST00000589116 REPS2Q8NFH8 660 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 RASSF8Q8NHQ8 419 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 SPATA20Q8TB22 786 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 CLEC4DQ8WXI8 215 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 HAS1Q92839 578 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 SMARCE1Q969G3 411 aa13.6□□□□□ -0.23
CCBE1-203ENST00000589116 BPIFA3Q9BQP9 254 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms