RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 AGXT2Q9BYV1 514 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 UPF3BQ9BZI7 483 aaKnown RBP11.17□□□□□ -0.62
APOC1-204ENST00000589078 ABHD16BQ9H3Z7 469 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 PDLIM7Q9NR12 457 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 MAP3K20Q9NYL2 800 aaKnown RBP11.17□□□□□ -0.62
APOC1-204ENST00000589078 ZHX1Q9UKY1 873 aaPredicted RBP11.17□□□□□ -0.62
APOC1-204ENST00000589078 BRPF3Q9ULD4 1205 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 KBTBD13C9JR72 458 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 SEPT4O43236 478 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 IGHA2P01877 340 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 AKR1A1P14550 325 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 AKAP17AQ02040 695 aaKnown RBP11.16□□□□□ -0.62
APOC1-204ENST00000589078 ANO1Q5XXA6 986 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 CPLX2Q6PUV4 134 aaKnown RBP11.16□□□□□ -0.62
APOC1-204ENST00000589078 SLC30A10Q6XR72 485 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 SLC39A5Q6ZMH5 540 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 ARMCX2Q7L311 632 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 SH3RF1Q7Z6J0 888 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 CCDC82Q8N4S0 544 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 DNERQ8NFT8 737 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.16□□□□□ -0.62
APOC1-204ENST00000589078 CHD7Q9P2D1 2997 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 PARP14Q460N5 1801 aa11.16□□□□□ -0.62
APOC1-204ENST00000589078 TMEM265A0A087WTH1 108 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 TRIM43BA6NCK2 446 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 SOWAHBA6NEL2 793 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 GCOM1H8Y6P7 765 aaPredicted RBP11.15□□□□□ -0.62
APOC1-204ENST00000589078 PPP1R11O60927 126 aaPredicted RBP11.15□□□□□ -0.62
APOC1-204ENST00000589078 CFBP00751 764 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
APOC1-204ENST00000589078 POLR2MP0CAP2 368 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 RARBP10826 455 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 ALDH5A1P51649 535 aaPredicted RBP11.15□□□□□ -0.62
APOC1-204ENST00000589078 EVCP57679 992 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 PDE4DQ08499 809 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 ACVR2BQ13705 512 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 SNX17Q15036 470 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 SLC35G1Q2M3R5 365 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 CMTR1Q8N1G2 835 aaKnown RBP11.15□□□□□ -0.62
APOC1-204ENST00000589078 SYTL5Q8TDW5 730 aaPredicted RBP11.15□□□□□ -0.62
APOC1-204ENST00000589078 NSUN6Q8TEA1 469 aaKnown RBP11.15□□□□□ -0.62
APOC1-204ENST00000589078 CUL5Q93034 780 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 TRIM43Q96BQ3 446 aaPredicted RBP11.15□□□□□ -0.62
APOC1-204ENST00000589078 RNPC3Q96LT9 517 aaKnown RBP11.15□□□□□ -0.62
APOC1-204ENST00000589078 FAM184BQ9ULE4 1060 aa11.15□□□□□ -0.62
APOC1-204ENST00000589078 hCG_1984214I3L0E3 225 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 CPLX1O14810 134 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 SEC24BO95487 1268 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 SNAI1O95863 264 aaPredicted RBP11.14□□□□□ -0.63
APOC1-204ENST00000589078 PDIA3P30101 505 aaKnown RBP11.14□□□□□ -0.63
APOC1-204ENST00000589078 EPHB4P54760 987 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 GRIN2CQ14957 1233 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 PRAMEF19Q5SWL8 479 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 ARHGEF16Q5VV41 709 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 HEATR3Q7Z4Q2 680 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 TEX2Q8IWB9 1127 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 ZNF713Q8N859 430 aaPredicted RBP11.14□□□□□ -0.63
APOC1-204ENST00000589078 ARRDC4Q8NCT1 418 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 IL17RAQ96F46 866 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 ZNF274Q96GC6 653 aaPredicted RBP11.14□□□□□ -0.63
APOC1-204ENST00000589078 FGD4Q96M96 766 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 RMDN3Q96TC7 470 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 GLT8D2Q9H1C3 349 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 ALDH8A1Q9H2A2 487 aaPredicted RBP11.14□□□□□ -0.63
APOC1-204ENST00000589078 SPC25Q9HBM1 224 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 VTA1Q9NP79 307 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 TRANK1O15050 2925 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 NID2Q14112 1375 aa11.14□□□□□ -0.63
APOC1-204ENST00000589078 COL11A1P12107 1806 aaPredicted RBP11.14□□□□□ -0.63
APOC1-204ENST00000589078 CNTNAP5Q8WYK1 1306 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 CDKL5O76039 1030 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 ZNF865P0CJ78 1059 aaPredicted RBP11.13□□□□□ -0.63
APOC1-204ENST00000589078 DNAJB2P25686 324 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 ITGB8P26012 769 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 ADD1P35611 737 aaKnown RBP11.13□□□□□ -0.63
APOC1-204ENST00000589078 PLA2G5P39877 138 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 ADCYAP1R1P41586 468 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 HSD17B4P51659 736 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 GHRHRQ02643 423 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 TOB2Q14106 344 aaPredicted RBP11.13□□□□□ -0.63
APOC1-204ENST00000589078 PPP1R18Q6NYC8 613 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 NOL8Q76FK4 1167 aaKnown RBP11.13□□□□□ -0.63
APOC1-204ENST00000589078 TRIM22Q8IYM9 498 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 MORC4Q8TE76 937 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 CCDC12Q8WUD4 166 aaPredicted RBP11.13□□□□□ -0.63
APOC1-204ENST00000589078 FERMT2Q96AC1 680 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 IWS1Q96ST2 819 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 C22orf23Q9BZE7 217 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 PSTPIP2Q9H939 334 aa11.13□□□□□ -0.63
APOC1-204ENST00000589078 V9GY48 417 aaPredicted RBP11.13□□□□□ -0.63
APOC1-204ENST00000589078 NCOR1O75376 2440 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 CDC27P30260 824 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 NEK4P51957 841 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 NAPAP54920 295 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 CCT2P78371 535 aaKnown RBP11.12□□□□□ -0.63
APOC1-204ENST00000589078 TLE2Q04725 743 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 STXBP2Q15833 593 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 CCDC144BQ3MJ40 725 aa11.12□□□□□ -0.63
APOC1-204ENST00000589078 RNF180Q86T96 592 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms