RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 COL25A1Q9BXS0 654 aaPredicted RBP9.85□□□□□ -0.83
ATG4D-210ENST00000588972 SOS1Q07889 1333 aaPredicted RBP9.84□□□□□ -0.83
ATG4D-210ENST00000588972 U2AF1L5P0DN76 240 aaPredicted RBP9.84□□□□□ -0.83
ATG4D-210ENST00000588972 U2AF1Q01081 240 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATG4D-210ENST00000588972 ID3Q02535 119 aa9.84□□□□□ -0.83
ATG4D-210ENST00000588972 FOXB2Q5VYV0 432 aa9.84□□□□□ -0.83
ATG4D-210ENST00000588972 INTS5Q6P9B9 1019 aaKnown RBP9.84□□□□□ -0.83
ATG4D-210ENST00000588972 CHSY3Q70JA7 882 aa9.84□□□□□ -0.83
ATG4D-210ENST00000588972 NOL8Q76FK4 1167 aaKnown RBP9.84□□□□□ -0.83
ATG4D-210ENST00000588972 ACDQ96AP0 544 aa9.84□□□□□ -0.83
ATG4D-210ENST00000588972 SGSM3Q96HU1 749 aa9.84□□□□□ -0.83
ATG4D-210ENST00000588972 TMEM87BQ96K49 555 aa9.84□□□□□ -0.83
ATG4D-210ENST00000588972 IRF2BPLQ9H1B7 796 aa9.84□□□□□ -0.83
ATG4D-210ENST00000588972 PRDM6Q9NQX0 595 aa9.84□□□□□ -0.83
ATG4D-210ENST00000588972 KCNK4Q9NYG8 393 aa9.84□□□□□ -0.83
ATG4D-210ENST00000588972 COL15A1P39059 1388 aa9.84□□□□□ -0.83
ATG4D-210ENST00000588972 CCDC88AQ3V6T2 1871 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 H3BM21 787 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 FANCGO15287 622 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 TMPRSS2O15393 492 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 PRKAR2BP31323 418 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 NTF4P34130 210 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 CD68P34810 354 aaPredicted RBP9.83□□□□□ -0.84
ATG4D-210ENST00000588972 PMS1P54277 932 aaKnown RBP9.83□□□□□ -0.84
ATG4D-210ENST00000588972 YARSP54577 528 aaKnown RBP9.83□□□□□ -0.84
ATG4D-210ENST00000588972 MTHFSDQ2M296 383 aaKnown RBP9.83□□□□□ -0.84
ATG4D-210ENST00000588972 TM4SF20Q53R12 229 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 MRPL41Q8IXM3 137 aaKnown RBP9.83□□□□□ -0.84
ATG4D-210ENST00000588972 TMEM192Q8IY95 271 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 TTLL6Q8N841 843 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 NINJ1Q92982 152 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 MFSD3Q96ES6 412 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 DHRS1Q96LJ7 313 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 PICK1Q9NRD5 415 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 RAD18Q9NS91 495 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 SUSD2Q9UGT4 822 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 NUDCQ9Y266 331 aa9.83□□□□□ -0.84
ATG4D-210ENST00000588972 DLG5Q8TDM6 1919 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 DICER1Q9UPY3 1922 aaKnown RBP9.82□□□□□ -0.84
ATG4D-210ENST00000588972 CCDC163A0A0D9SF12 145 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 RGS13O14921 159 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 DEAF1O75398 565 aaPredicted RBP9.82□□□□□ -0.84
ATG4D-210ENST00000588972 VSIG8P0DPA2 414 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 SRSF11Q05519 484 aaKnown RBP9.82□□□□□ -0.84
ATG4D-210ENST00000588972 CBX2Q14781 532 aaPredicted RBP9.82□□□□□ -0.84
ATG4D-210ENST00000588972 NFIXQ14938 502 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 BBS9Q3SYG4 887 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 PPFIBP1Q86W92 1011 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 DNAJC10Q8IXB1 793 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 DMRTC2Q8IXT2 367 aaPredicted RBP9.82□□□□□ -0.84
ATG4D-210ENST00000588972 DHX37Q8IY37 1157 aaKnown RBP9.82□□□□□ -0.84
ATG4D-210ENST00000588972 NIM1KQ8IY84 436 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 PHACTR4Q8IZ21 702 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 EDARADDQ8WWZ3 215 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 SLC6A18Q96N87 628 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 KIF2CQ99661 725 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 PPP1R9AQ9ULJ8 1098 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 CARMIL3Q8ND23 1372 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 SCN7AQ01118 1682 aa9.82□□□□□ -0.84
ATG4D-210ENST00000588972 COL11A2P13942 1736 aaPredicted RBP9.82□□□□□ -0.84
ATG4D-210ENST00000588972 FER1L6Q2WGJ9 1857 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 UBOX5O94941 541 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 PARNO95453 639 aaKnown RBP9.81□□□□□ -0.84
ATG4D-210ENST00000588972 NID1P14543 1247 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 ZNF143P52747 638 aaPredicted RBP9.81□□□□□ -0.84
ATG4D-210ENST00000588972 PABPC4Q13310 644 aaKnown RBP eCLIP9.81□□□□□ -0.841e-15■■■□□ 17.5
ATG4D-210ENST00000588972 COL9A3Q14050 684 aaPredicted RBP9.81□□□□□ -0.84
ATG4D-210ENST00000588972 CCDC184Q52MB2 194 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 SLC6A19Q695T7 634 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 THNSL2Q86YJ6 484 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 C2CD5Q86YS7 1000 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 HID1Q8IV36 788 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 NPAS3Q8IXF0 933 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 GALNT6Q8NCL4 622 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 UBASH3BQ8TF42 649 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 KISS1RQ969F8 398 aaPredicted RBP9.81□□□□□ -0.84
ATG4D-210ENST00000588972 BTBD6Q96KE9 485 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 EXOC2Q96KP1 924 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 PHACTR3Q96KR7 559 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 CHMP4AQ9BY43 222 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 IRX2Q9BZI1 471 aaPredicted RBP9.81□□□□□ -0.84
ATG4D-210ENST00000588972 FBRSQ9HAH7 460 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 ARHGEF4Q9NR80 690 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 TYW1Q9NV66 732 aaKnown RBP9.81□□□□□ -0.84
ATG4D-210ENST00000588972 CRIM1Q9NZV1 1036 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 SUCOQ9UBS9 1254 aaKnown RBP9.81□□□□□ -0.84
ATG4D-210ENST00000588972 NARFQ9UHQ1 456 aa9.81□□□□□ -0.84
ATG4D-210ENST00000588972 UBR2Q8IWV8 1755 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 A0A1W2PQU0 124 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 H0YIN7 160 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 AGRPO00253 132 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 LCE2BO14633 110 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 RFPL3O75679 317 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 PDGFRBP09619 1106 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 CYP19A1P11511 503 aaPredicted RBP9.8□□□□□ -0.84
ATG4D-210ENST00000588972 L1CAMP32004 1257 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 SV2CQ496J9 727 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 AKAP4Q5JQC9 854 aa9.8□□□□□ -0.84
ATG4D-210ENST00000588972 EXOSC6Q5RKV6 272 aaKnown RBP9.8□□□□□ -0.84
ATG4D-210ENST00000588972 ZNF507Q8TCN5 953 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms