RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 MSNP26038 577 aaKnown RBP9.9□□□□□ -0.82
SMAD4-206ENST00000588860 CDC25BP30305 580 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 UBA7P41226 1012 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 SARSP49591 514 aaKnown RBP9.9□□□□□ -0.82
SMAD4-206ENST00000588860 STAT2P52630 851 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 KARSQ15046 597 aaKnown RBP9.9□□□□□ -0.82
SMAD4-206ENST00000588860 TMEM266Q2M3C6 531 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 USH1GQ495M9 461 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 NT5DC1Q5TFE4 455 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 RRAGBQ5VZM2 374 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.9□□□□□ -0.82
SMAD4-206ENST00000588860 TRIML1Q8N9V2 468 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.82
SMAD4-206ENST00000588860 TEPSINQ96N21 525 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 FEZ1Q99689 392 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 VCPKMTQ9H867 229 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 DISC1Q9NRI5 854 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 RNF181Q9P0P0 153 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 PRR12Q9ULL5 1215 aa9.9□□□□□ -0.82
SMAD4-206ENST00000588860 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMAD4-206ENST00000588860 OTOFQ9HC10 1997 aa9.9□□□□□ -0.83
SMAD4-206ENST00000588860 PHF20L1A8MW92 1017 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 IKBKBO14920 756 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 GTPBP6O43824 516 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-206ENST00000588860 SLC37A4O43826 429 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 TPM3P06753 285 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 ASNSP08243 561 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 BMP6P22004 513 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 CASP1P29466 404 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 CDC25AP30304 524 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 TECP42680 631 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 MYL5Q02045 173 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 MAP3K10Q02779 954 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 DPYDQ12882 1025 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 CCDC174Q6PII3 467 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 CCDC84Q86UT8 332 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-206ENST00000588860 CABP7Q86V35 215 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 FAM160B2Q86V87 743 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 MLKLQ8NB16 471 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 STAMQ92783 540 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 AK8Q96MA6 479 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 PLIN2Q99541 437 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 NAP1L4Q99733 375 aaKnown RBP9.89□□□□□ -0.83
SMAD4-206ENST00000588860 ZNF341Q9BYN7 854 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 CCSER1Q9C0I3 900 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 DDX25Q9UHL0 483 aaKnown RBP9.89□□□□□ -0.83
SMAD4-206ENST00000588860 ZKSCAN5Q9Y2L8 839 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 PTPRFP10586 1907 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 PDE4DIPQ5VU43 2346 aa9.89□□□□□ -0.83
SMAD4-206ENST00000588860 LOXHD1Q8IVV2 1947 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 USP17L15C9J2P7 530 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 USP17L13C9JLJ4 530 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 USP17L11C9JVI0 530 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 USP17L18D6R9N7 530 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 USP17L22D6RA61 530 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 USP17L17D6RBQ6 530 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 USP17L19D6RCP7 530 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 USP17L20D6RJB6 530 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 MARCH6O60337 910 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 GCFC2P16383 781 aaKnown RBP9.88□□□□□ -0.83
SMAD4-206ENST00000588860 TXKP42681 527 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 USP17L24Q0WX57 530 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 TRAF1Q13077 416 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 AP3B2Q13367 1082 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 NCAPHQ15003 741 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 MCTP2Q6DN12 878 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 PPP4R3AQ6IN85 833 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 USP17L6PQ6QN14 398 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 APOBEC3FQ8IUX4 373 aaKnown RBP9.88□□□□□ -0.83
SMAD4-206ENST00000588860 SPATA20Q8TB22 786 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 CHURC1Q8WUH1 139 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 KIFC2Q96AC6 838 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 MRFAP1L1Q96HT8 127 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 ZNF830Q96NB3 372 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-206ENST00000588860 MTMR9Q96QG7 549 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 ANO3Q9BYT9 981 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 GLIS2Q9BZE0 524 aaPredicted RBP9.88□□□□□ -0.83
SMAD4-206ENST00000588860 DEFB129Q9H1M3 183 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 BLZF1Q9H2G9 400 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 GINM1Q9NU53 330 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 WBP1LQ9NX94 342 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 FEM1BQ9UK73 627 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 RLFQ13129 1914 aa9.88□□□□□ -0.83
SMAD4-206ENST00000588860 EDIL3O43854 480 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 RPN1P04843 607 aaKnown RBP9.87□□□□□ -0.83
SMAD4-206ENST00000588860 PLCG1P19174 1290 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 LMNB1P20700 586 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 PTGS1P23219 599 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 LMOD1P29536 600 aaPredicted RBP9.87□□□□□ -0.83
SMAD4-206ENST00000588860 CUL4BQ13620 913 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 NBPF12Q5TAG4 269 aaPredicted RBP9.87□□□□□ -0.83
SMAD4-206ENST00000588860 ANGEL2Q5VTE6 544 aaKnown RBP9.87□□□□□ -0.83
SMAD4-206ENST00000588860 DCAF15Q66K64 600 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 TRPM4Q8TD43 1214 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 CALML4Q96GE6 196 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 GSDMAQ96QA5 445 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 RAB34Q9BZG1 259 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 RANBP17Q9H2T7 1088 aaKnown RBP9.87□□□□□ -0.83
SMAD4-206ENST00000588860 CUEDC2Q9H467 287 aa9.87□□□□□ -0.83
SMAD4-206ENST00000588860 TTC12Q9H892 705 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms