RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 MAP3K20Q9NYL2 800 aaKnown RBP22.33■■□□□ 1.17
CCDC130-209ENST00000588809 EYSQ5T1H1 3165 aa22.33■■□□□ 1.16
CCDC130-209ENST00000588809 CHD9Q3L8U1 2897 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 GRIN2DO15399 1336 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 SLC27A2O14975 620 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 TIMP1P01033 207 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 CD4P01730 458 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 CPT1AP50416 773 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 SHHQ15465 462 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 CATIPQ7Z7H3 387 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 SAMD3Q8N6K7 520 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 TAAR1Q96RJ0 339 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 RMDN3Q96TC7 470 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 PCDHA1Q9Y5I3 950 aa22.32■■□□□ 1.16
CCDC130-209ENST00000588809 MCM5P33992 734 aa22.31■■□□□ 1.16
CCDC130-209ENST00000588809 TRAF1Q13077 416 aa22.31■■□□□ 1.16
CCDC130-209ENST00000588809 ITGA7Q13683 1181 aa22.31■■□□□ 1.16
CCDC130-209ENST00000588809 C9orf50Q5SZB4 431 aa22.31■■□□□ 1.16
CCDC130-209ENST00000588809 CREB3L3Q68CJ9 461 aa22.31■■□□□ 1.16
CCDC130-209ENST00000588809 ANO2Q9NQ90 1003 aa22.31■■□□□ 1.16
CCDC130-209ENST00000588809 POLR3EQ9NVU0 708 aa22.31■■□□□ 1.16
CCDC130-209ENST00000588809 TLR3O15455 904 aaKnown RBP22.3■■□□□ 1.16
CCDC130-209ENST00000588809 PRC1O43663 620 aa22.3■■□□□ 1.16
CCDC130-209ENST00000588809 CFBP00751 764 aa22.3■■□□□ 1.16
CCDC130-209ENST00000588809 FPGSQ05932 587 aa22.3■■□□□ 1.16
CCDC130-209ENST00000588809 CCDC62Q6P9F0 684 aa22.3■■□□□ 1.16
CCDC130-209ENST00000588809 OR6J1Q8NGC5 347 aa22.3■■□□□ 1.16
CCDC130-209ENST00000588809 TMEM87BQ96K49 555 aa22.3■■□□□ 1.16
CCDC130-209ENST00000588809 PIGSQ96S52 555 aa22.3■■□□□ 1.16
CCDC130-209ENST00000588809 TANC1Q9C0D5 1861 aa22.3■■□□□ 1.16
CCDC130-209ENST00000588809 PNMA6FA0A0J9YX94 578 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 A6NJR5 290 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 DDAH1O94760 285 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 ARIH2O95376 493 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 TXNP10599 105 aaKnown RBP22.29■■□□□ 1.16
CCDC130-209ENST00000588809 EPHB4P54760 987 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 PURAQ00577 322 aaKnown RBP22.29■■□□□ 1.16
CCDC130-209ENST00000588809 COL9A3Q14050 684 aaPredicted RBP22.29■■□□□ 1.16
CCDC130-209ENST00000588809 TTLL4Q14679 1199 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 STXBP2Q15833 593 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 MFSD5Q6N075 450 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 CASC1Q6TDU7 716 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 HOMER1Q86YM7 354 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 ZNF654Q8IZM8 581 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 TMTC2Q8N394 836 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 SPZ1Q9BXG8 430 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 PXMP2Q9NR77 195 aa22.29■■□□□ 1.16
CCDC130-209ENST00000588809 UNC80Q8N2C7 3258 aa22.28■■□□□ 1.16
CCDC130-209ENST00000588809 DOCK5Q9H7D0 1870 aa22.28■■□□□ 1.16
CCDC130-209ENST00000588809 SH2B2O14492 632 aaPredicted RBP22.28■■□□□ 1.16
CCDC130-209ENST00000588809 SMARCA1P28370 1054 aa22.28■■□□□ 1.16
CCDC130-209ENST00000588809 LIFRP42702 1097 aa22.28■■□□□ 1.16
CCDC130-209ENST00000588809 ARHGEF16Q5VV41 709 aa22.28■■□□□ 1.16
CCDC130-209ENST00000588809 GPHNQ9NQX3 736 aaPredicted RBP22.28■■□□□ 1.16
CCDC130-209ENST00000588809 TRIP12Q14669 1992 aaPredicted RBP22.28■■□□□ 1.16
CCDC130-209ENST00000588809 GBF1Q92538 1859 aa22.28■■□□□ 1.16
CCDC130-209ENST00000588809 KIF5BP33176 963 aa22.27■■□□□ 1.16
CCDC130-209ENST00000588809 BRDTQ58F21 947 aaPredicted RBP22.27■■□□□ 1.16
CCDC130-209ENST00000588809 FAM109BQ6ICB4 259 aaPredicted RBP22.27■■□□□ 1.16
CCDC130-209ENST00000588809 DEFB123Q8N688 67 aa22.27■■□□□ 1.16
CCDC130-209ENST00000588809 COPS5Q92905 334 aa22.27■■□□□ 1.16
CCDC130-209ENST00000588809 SCN5AQ14524 2016 aa22.26■■□□□ 1.15
CCDC130-209ENST00000588809 KPNA6O60684 536 aa22.26■■□□□ 1.15
CCDC130-209ENST00000588809 CDC45O75419 566 aa22.26■■□□□ 1.15
CCDC130-209ENST00000588809 EIF3JO75822 258 aaKnown RBP22.26■■□□□ 1.15
CCDC130-209ENST00000588809 NR3C2P08235 984 aa22.26■■□□□ 1.15
CCDC130-209ENST00000588809 EIF2AK2P19525 551 aaKnown RBP22.26■■□□□ 1.15
CCDC130-209ENST00000588809 PSMC6P62333 389 aa22.26■■□□□ 1.15
CCDC130-209ENST00000588809 CTCFLQ8NI51 663 aaPredicted RBP22.26■■□□□ 1.15
CCDC130-209ENST00000588809 MTG1Q9BT17 334 aaPredicted RBP22.26■■□□□ 1.15
CCDC130-209ENST00000588809 PRUNE2Q8WUY3 3088 aa22.26■■□□□ 1.15
CCDC130-209ENST00000588809 B4GALT4O60513 344 aa22.25■■□□□ 1.15
CCDC130-209ENST00000588809 RNF20Q5VTR2 975 aa22.25■■□□□ 1.15
CCDC130-209ENST00000588809 Q7L0L9 218 aa22.25■■□□□ 1.15
CCDC130-209ENST00000588809 CCDC136Q96JN2 1154 aa22.25■■□□□ 1.15
CCDC130-209ENST00000588809 LZTS2Q9BRK4 669 aa22.25■■□□□ 1.15
CCDC130-209ENST00000588809 PDCD2LQ9BRP1 358 aa22.25■■□□□ 1.15
CCDC130-209ENST00000588809 MYL10Q9BUA6 226 aa22.25■■□□□ 1.15
CCDC130-209ENST00000588809 CHD7Q9P2D1 2997 aa22.25■■□□□ 1.15
CCDC130-209ENST00000588809 MYL3P08590 195 aa22.24■■□□□ 1.15
CCDC130-209ENST00000588809 HOXA13P31271 388 aaPredicted RBP22.24■■□□□ 1.15
CCDC130-209ENST00000588809 ARHGAP1Q07960 439 aa22.24■■□□□ 1.15
CCDC130-209ENST00000588809 PPIGQ13427 754 aaKnown RBP eCLIP22.24■■□□□ 1.156e-7■■■□□ 17
CCDC130-209ENST00000588809 TSGA10IPQ3SY00 556 aa22.24■■□□□ 1.15
CCDC130-209ENST00000588809 SEPT14Q6ZU15 432 aa22.24■■□□□ 1.15
CCDC130-209ENST00000588809 SGMS1Q86VZ5 419 aa22.24■■□□□ 1.15
CCDC130-209ENST00000588809 EMID1Q96A84 441 aaPredicted RBP22.24■■□□□ 1.15
CCDC130-209ENST00000588809 TRPV6Q9H1D0 765 aa22.24■■□□□ 1.15
CCDC130-209ENST00000588809 ALDH8A1Q9H2A2 487 aaPredicted RBP22.24■■□□□ 1.15
CCDC130-209ENST00000588809 TRANK1O15050 2925 aa22.24■■□□□ 1.15
CCDC130-209ENST00000588809 CCDC69A6NI79 296 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 GCOM1H8Y6P7 765 aaPredicted RBP22.23■■□□□ 1.15
CCDC130-209ENST00000588809 GH1P01241 217 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 POLR2MP0CAP2 368 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 CALM1P0DP23 149 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 CALM2P0DP24 149 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 CALM3P0DP25 149 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 GNAQP50148 359 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 SMAD3P84022 425 aaKnown RBP22.23■■□□□ 1.15
CCDC130-209ENST00000588809 PGM5Q15124 567 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms